Experiment set9IT087 for Pseudomonas fluorescens FW300-N2E3

Compare to:

Ionizing radiation, 126.196 Gy, replicate 1

Group: radiation
Media: LB + Ionizing radiation (126.196 Gy)
Culturing: pseudo3_N2E3_ML2, tube, Aerobic, at 30 (C)
By: Mike Adams on 03/06/16
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 5 genes in this experiment

For radiation Ionizing radiation in Pseudomonas fluorescens FW300-N2E3

For radiation Ionizing radiation across organisms

SEED Subsystems

Subsystem #Specific
DNA repair, UvrABC system 3
DNA-replication 1
DNA repair, bacterial 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
hydroxymethylpyrimidine salvage 2 2 2
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis I 2 2 1
thiamine diphosphate salvage II 5 4 2
thiamine diphosphate salvage IV (yeast) 7 3 2
thiamine diphosphate formation from pyrithiamine and oxythiamine (yeast) 8 3 2
superpathway of thiamine diphosphate biosynthesis III (eukaryotes) 7 3 1
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II 8 4 1
superpathway of thiamine diphosphate biosynthesis I 10 8 1
superpathway of thiamine diphosphate biosynthesis II 11 9 1