Experiment set9IT087 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with L-alliin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4203 -4.5 -3.1 SsrA-binding protein compare
Psyr_4740 -4.5 -9.5 thiazole-phosphate synthase compare
Psyr_4340 -3.6 -12.4 phosphomethylpyrimidine kinase, putative compare
Psyr_0951 -3.4 -3.9 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4341 -3.4 -8.6 thiamine-phosphate diphosphorylase compare
Psyr_0034 -3.2 -4.9 tryptophan synthase, beta chain compare
Psyr_4091 -3.1 -5.7 8-oxo-dGTPase compare
Psyr_5132 -2.8 -4.4 Glucose-inhibited division protein A subfamily compare
Psyr_1544 -2.8 -5.5 SirA-like protein compare
Psyr_4686 -2.6 -8.3 8-amino-7-oxononanoate synthase compare
Psyr_0454 -2.6 -7.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1613 -2.5 -6.6 septum site-determining protein MinC compare
Psyr_4991 -2.4 -3.1 hypothetical protein compare
Psyr_2980 -2.3 -5.0 UDP-glucose pyrophosphorylase compare
Psyr_4684 -2.3 -4.0 biotin synthesis protein BioC compare
Psyr_4687 -2.2 -7.9 biotin synthase compare
Psyr_4683 -2.1 -6.7 dethiobiotin synthase compare
Psyr_4519 -2.1 -7.5 General substrate transporter:Major facilitator superfamily compare
Psyr_0383 -2.1 -1.4 Twin-arginine translocation protein TatB compare
Psyr_1373 -1.9 -4.1 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1094 -1.9 -4.4 cold-shock DNA-binding protein family compare
Psyr_3419 -1.8 -5.3 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_0487 -1.8 -3.2 glutathione synthase compare
Psyr_3193 -1.8 -3.5 Transcription factor jumonji, jmjC compare
Psyr_1419 -1.7 -2.8 preQ(0) biosynthesis protein QueC compare
Psyr_0535 -1.7 -3.8 toluene tolerance protein, putative compare
Psyr_4115 -1.7 -3.6 phosphoheptose isomerase compare
Psyr_0835 -1.7 -6.0 transcriptional regulator, TraR/DksA family compare
Psyr_5135 -1.6 -0.9 Protein of unknown function DUF37 compare
Psyr_1747 -1.5 -3.8 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_0849 -1.5 -8.6 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4566 -1.5 -7.6 Peptidase M23B compare
Psyr_3020 -1.5 -2.5 precorrin-4 C11-methyltransferase compare
Psyr_2733 -1.5 -3.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_0917 -1.5 -8.6 ABC-2 compare
Psyr_0918 -1.4 -10.2 ABC transporter compare
Psyr_4362 -1.4 -3.3 Rare lipoprotein A compare
Psyr_4194 -1.4 -3.7 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_4089 -1.4 -5.4 PAS compare
Psyr_0033 -1.4 -2.8 tryptophan synthase, alpha chain compare
Psyr_4774 -1.3 -1.4 Hypothetical protein compare
Psyr_3290 -1.3 -2.6 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_5067 -1.3 -4.9 conserved hypothetical protein compare
Psyr_4490 -1.3 -2.5 transcriptional regulator, DeoR family compare
Psyr_2566 -1.3 -2.2 dihydroxyacetone kinase DhaK subunit compare
Psyr_0475 -1.3 -2.1 Protein of unknown function YGGT compare
Psyr_1910 -1.2 -4.3 VacJ-like lipoprotein compare
Psyr_0936 -1.2 -7.6 Glycosyl transferase, group 1 compare
Psyr_0571 -1.2 -3.1 tRNA isopentenyltransferase compare
Psyr_1371 -1.2 -5.3 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0916 -1.2 -6.5 GDP-mannose 4,6-dehydratase compare
Psyr_1751 -1.2 -3.4 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_5133 -1.2 -3.6 tRNA modification GTPase trmE compare
Psyr_1864 -1.1 -3.3 spermidine synthase compare
Psyr_2851 -1.1 -2.3 conserved hypothetical protein compare
Psyr_2137 -1.1 -2.4 molybdopterin molybdochelatase compare
Psyr_0529 -1.1 -2.2 Glycosyl transferase, group 1 compare
Psyr_0826 -1.1 -4.9 glucose-6-phosphate isomerase compare
Psyr_1268 -1.1 -4.0 extracellular solute-binding protein, family 3:SLT compare
Psyr_4158 -1.1 -6.2 conserved hypothetical protein compare
Psyr_3199 -1.1 -2.5 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_4838 -1.1 -2.2 transcriptional regulator, MerR family compare
Psyr_4151 -1.1 -1.4 Phosphocarrier HPr protein compare
Psyr_0914 -1.1 -6.0 Glycosyl transferase, group 1 compare
Psyr_2143 -1.1 -1.5 delta1-piperideine 2-carboxylate reductase compare
Psyr_2346 -1.1 -4.5 conserved hypothetical protein compare
Psyr_4465 -1.0 -1.1 conserved domain protein compare
Psyr_2591 -1.0 -4.5 transport system permease protein compare
Psyr_2592 -1.0 -3.2 transport system permease protein compare
Psyr_4512 -1.0 -4.9 putative phage-related protein compare
Psyr_0268 -1.0 -1.5 DSBA oxidoreductase compare
Psyr_3476 -1.0 -2.6 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3282 -1.0 -4.1 transcriptional regulator, TetR family compare
Psyr_0574 -1.0 -3.7 protease FtsH subunit HflK compare
Psyr_RNA78 -1.0 -3.0 5S ribosomal RNA compare
Psyr_0378 -1.0 -5.9 Glycosyl transferase, family 2 compare
Psyr_3581 -1.0 -4.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_0635 -1.0 -1.9 MaoC-like dehydratase compare
Psyr_2231 -1.0 -3.5 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_3462 -1.0 -1.7 conserved hypothetical protein compare
Psyr_4788 -1.0 -1.6 lipoprotein, putative compare
Psyr_3208 -1.0 -2.4 NADH dehydrogenase subunit M compare
Psyr_2938 -0.9 -2.5 transcriptional regulator, LysR family compare
Psyr_1667 -0.9 -3.7 Colicin V production protein compare
Psyr_0085 -0.9 -2.6 conserved hypothetical protein compare
Psyr_4183 -0.9 -2.0 protein translocase subunit secG compare
Psyr_4879 -0.9 -2.5 hypothetical protein compare
Psyr_0579 -0.9 -5.6 RNAse R compare
Psyr_0784 -0.9 -2.0 CheW-like protein compare
Psyr_0774 -0.9 -2.6 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_4424 -0.9 -3.6 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_4967 -0.9 -2.6 conserved hypothetical protein compare
Psyr_2245 -0.9 -1.4 conserved domain protein compare
Psyr_4139 -0.9 -3.6 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_2141 -0.9 -1.4 hypothetical protein compare
Psyr_2757 -0.9 -1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2280 -0.9 -2.7 Alkanesulfonate monooxygenase compare
Psyr_2221 -0.9 -0.9 sarcosine oxidase, gamma subunit compare
Psyr_5050 -0.9 -2.8 transcriptional regulator, LysR family compare
Psyr_1650 -0.9 -2.1 aminodeoxychorismate lyase apoprotein compare
Psyr_4316 -0.9 -3.1 conserved hypothetical protein compare
Psyr_2854 -0.9 -3.6 conserved hypothetical protein compare
Psyr_0393 -0.9 -3.1 Protein of unknown function DUF971 compare
Psyr_1556 -0.9 -2.0 hypothetical protein compare
Psyr_3637 -0.9 -5.4 Glycosyl transferase, family 4 compare
Psyr_1140 -0.9 -2.0 Disulfide bond formation protein DsbB compare
Psyr_1594 -0.9 -3.1 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_3358 -0.9 -2.4 transmembrane pair compare
Psyr_3833 -0.9 -3.6 Plasmid stabilization system compare
Psyr_3906 -0.9 -1.3 regulatory protein, DeoR compare
Psyr_0920 -0.9 -7.0 Glycosyl transferase, group 1 compare
Psyr_3954 -0.9 -3.3 GTP-binding protein LepA compare
Psyr_3667 -0.9 -2.2 conserved hypothetical protein compare
Psyr_0919 -0.8 -6.1 Chromosome segregation ATPase-like protein compare
Psyr_4278 -0.8 -1.5 regulatory protein, LuxR compare
Psyr_3008 -0.8 -3.6 Undecaprenyl-diphosphatase compare
Psyr_0830 -0.8 -2.8 Poly(A) polymerase compare
Psyr_3904 -0.8 -3.5 Major intrinsic protein compare
Psyr_1797 -0.8 -3.3 conserved hypothetical protein compare
Psyr_1688 -0.8 -1.5 Protein of unknown function DUF1315 compare
Psyr_1765 -0.8 -3.4 GCN5-related N-acetyltransferase compare
Psyr_4093 -0.8 -2.8 glutamate N-acetyltransferase compare
Psyr_2897 -0.8 -2.9 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2169 -0.8 -3.2 transcriptional regulator, MerR family compare
Psyr_3298 -0.8 -3.0 conserved hypothetical protein compare
Psyr_4464 -0.8 -1.1 lipoprotein, putative compare
Psyr_2330 -0.8 -1.8 FAD dependent oxidoreductase compare
Psyr_3698 -0.8 -3.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_1859 -0.8 -2.1 conserved hypothetical protein compare
Psyr_3644 -0.8 -1.7 prephenate dehydrogenase compare
Psyr_2030 -0.8 -1.2 Calcium-binding EF-hand compare
Psyr_2095 -0.8 -3.0 Conserved TM helix compare
Psyr_0303 -0.8 -1.5 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_0831 -0.8 -1.4 Two-component response regulator CbrB compare
Psyr_2551 -0.8 -2.8 acetylornithine aminotransferase apoenzyme compare
Psyr_1163 -0.8 -2.2 Isochorismatase hydrolase compare
Psyr_0531 -0.8 -1.6 LmbE-like protein compare
Psyr_1269 -0.8 -2.6 phosphoribosylformylglycinamidine synthase compare
Psyr_1024 -0.8 -1.4 Flavodoxin/nitric oxide synthase compare
Psyr_1511 -0.8 -2.3 type II secretion system protein E compare
Psyr_2696 -0.8 -2.5 UDP-glucose 6-dehydrogenase compare
Psyr_1984 -0.7 -1.9 3-isopropylmalate dehydratase, small subunit compare
Psyr_2809 -0.7 -2.6 hypothetical protein compare
Psyr_1236 -0.7 -1.3 transcriptional regulator, BadM/Rrf2 family compare
Psyr_0255 -0.7 -1.7 glutamate-cysteine ligase compare
Psyr_3287 -0.7 -1.0 DNA topoisomerase I compare
Psyr_3293 -0.7 -0.9 UspA compare
Psyr_0724 -0.7 -1.9 conserved hypothetical protein compare
Psyr_1614 -0.7 -0.7 lipid A biosynthesis acyltransferase compare
Psyr_1198 -0.7 -1.6 type III secretion protein HrpF compare
Psyr_3967 -0.7 -2.8 membrane protein TctB, putative compare
Psyr_2582 -0.7 -4.1 TonB-dependent siderophore receptor compare
Psyr_4622 -0.7 -2.0 Nucleotidyl transferase compare
Psyr_1528 -0.7 -1.8 Arc-like DNA binding protein compare
Psyr_1663 -0.7 -2.3 phosphoribosylanthranilate isomerase compare
Psyr_4627 -0.7 -1.6 dimethyladenosine transferase compare
Psyr_1181 -0.7 -3.3 Protein of unknown function DUF1375 compare
Psyr_0215 -0.7 -4.3 Exodeoxyribonuclease III xth compare
Psyr_3675 -0.7 -2.0 adenosylcobinamide kinase compare
Psyr_4141 -0.7 -2.3 ABC transporter compare
Psyr_RNA28 -0.7 -1.3 tRNA-Val compare
Psyr_2676 -0.7 -2.4 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4294 -0.7 -1.4 Histone deacetylase family protein compare
Psyr_0769 -0.7 -2.5 conserved hypothetical membrane-anchored protein compare
Psyr_2836 -0.7 -1.9 hypothetical protein compare
Psyr_4138 -0.7 -1.9 Toluene tolerance compare
Psyr_4100 -0.7 -2.9 D-alanine--D-alanine ligase compare
Psyr_2561 -0.7 -2.2 hypothetical protein compare
Psyr_2227 -0.7 -1.3 conserved hypothetical protein compare
Psyr_1980 -0.7 -1.8 Heat shock protein Hsp20 compare
Psyr_2476 -0.7 -1.5 Exodeoxyribonuclease III compare
Psyr_1306 -0.7 -2.3 CheW-like protein compare
Psyr_2341 -0.7 -3.2 conserved hypothetical protein compare
Psyr_3005 -0.7 -1.4 3-oxoadipate enol-lactonase compare
Psyr_3791 -0.7 -1.9 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_2538 -0.7 -1.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2855 -0.7 -1.4 methionine synthase (B12-independent) compare
Psyr_0983 -0.7 -3.0 Protein of unknown function DUF159 compare
Psyr_2270 -0.7 -1.6 transferase hexapeptide repeat protein compare
Psyr_1357 -0.7 -2.5 RNase HII compare
Psyr_3450 -0.7 -2.4 Hpt compare
Psyr_3636 -0.7 -4.5 Polysaccharide biosynthesis protein CapD compare
Psyr_3889 -0.7 -1.5 conserved hypothetical protein compare
Psyr_1127 -0.7 -1.5 Heavy metal response regulator compare
Psyr_2112 -0.7 -1.5 Protein with unknown function DUF469 compare
Psyr_3098 -0.7 -3.2 GCN5-related N-acetyltransferase compare
Psyr_3842 -0.7 -2.3 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_0176 -0.7 -1.5 conserved hypothetical protein compare
Psyr_3342 -0.7 -1.3 conserved hypothetical protein compare
Psyr_2307 -0.7 -2.5 conserved hypothetical protein compare
Psyr_5017 -0.7 -2.0 NAD(P) transhydrogenase subunit alpha compare
Psyr_3481 -0.6 -2.9 Flagellar basal-body rod protein FlgB compare
Psyr_3053 -0.6 -1.9 conserved hypothetical protein compare
Psyr_3694 -0.6 -2.3 MazG, bacterial compare
Psyr_3676 -0.6 -1.9 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_1728 -0.6 -1.7 tRNA--hydroxylase compare
Psyr_3665 -0.6 -2.2 conserved hypothetical protein compare
Psyr_3427 -0.6 -1.1 conserved hypothetical protein compare
Psyr_4134 -0.6 -3.1 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_4843 -0.6 -2.0 NUDIX hydrolase compare


Specific Phenotypes

For 1 genes in this experiment

For stress L-alliin in Pseudomonas syringae pv. syringae B728a

For stress L-alliin across organisms