Experiment set9IT087 for Ralstonia sp. UNC404CL21Col

Compare to:

Hexanoic acid carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS02160 -6.5 -4.5 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS14505 -6.1 -5.9 phosphoribosylanthranilate isomerase compare
ABZR87_RS21795 -6.0 -9.2 NUDIX domain-containing protein compare
ABZR87_RS16660 -5.6 -8.6 helix-turn-helix domain-containing protein compare
ABZR87_RS01810 -5.6 -3.8 glutamate 5-kinase compare
ABZR87_RS09445 -5.3 -13.7 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS02570 -5.2 -25.9 glutamate synthase-related protein compare
ABZR87_RS02145 -5.2 -3.6 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS02640 -5.2 -16.1 diaminopimelate decarboxylase compare
ABZR87_RS09465 -5.2 -7.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS13790 -5.0 -10.7 chorismate synthase compare
ABZR87_RS14530 -5.0 -11.6 3-isopropylmalate dehydrogenase compare
ABZR87_RS06770 -5.0 -8.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS14500 -4.9 -16.8 tryptophan synthase subunit beta compare
ABZR87_RS14535 -4.9 -8.8 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS05200 -4.9 -21.0 homoserine O-acetyltransferase compare
ABZR87_RS08630 -4.8 -10.8 dihydroorotase compare
ABZR87_RS22970 -4.7 -14.2 cystathionine gamma-synthase family protein compare
ABZR87_RS00835 -4.7 -5.6 argininosuccinate synthase compare
ABZR87_RS02595 -4.6 -14.5 shikimate kinase compare
ABZR87_RS05170 -4.6 -3.2 acetylglutamate kinase compare
ABZR87_RS16170 -4.6 -6.9 argininosuccinate lyase compare
ABZR87_RS01110 -4.5 -12.0 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS02140 -4.5 -20.9 anthranilate synthase component I compare
ABZR87_RS11440 -4.5 -10.3 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS00210 -4.4 -12.1 nitrite/sulfite reductase compare
ABZR87_RS20875 -4.4 -7.5 LysR family transcriptional regulator compare
ABZR87_RS14490 -4.4 -12.2 tryptophan synthase subunit alpha compare
ABZR87_RS05100 -4.4 -8.3 RNA polymerase-binding protein DksA compare
ABZR87_RS20880 -4.4 -10.9 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS07380 -4.3 -16.8 FAD/FMN-binding oxidoreductase compare
ABZR87_RS00190 -4.2 -14.7 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS14950 -4.2 -6.2 acetolactate synthase small subunit compare
ABZR87_RS05305 -4.2 -14.2 TetR family transcriptional regulator compare
ABZR87_RS09935 -4.1 -4.9 amino acid aminotransferase compare
ABZR87_RS04865 -4.1 -4.9 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS14955 -4.1 -8.3 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS07360 -4.1 -18.0 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS02565 -4.0 -7.8 glutamate synthase subunit beta compare
ABZR87_RS14540 -4.0 -8.1 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS13415 -3.9 -8.7 IclR family transcriptional regulator compare
ABZR87_RS02155 -3.9 -9.7 anthranilate phosphoribosyltransferase compare
ABZR87_RS11625 -3.7 -12.5 malate synthase A compare
ABZR87_RS08625 -3.7 -2.5 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS00200 -3.6 -6.0 phosphoadenylyl-sulfate reductase compare
ABZR87_RS01645 -3.5 -7.1 type II 3-dehydroquinate dehydratase compare
ABZR87_RS10565 -3.5 -6.1 cupin domain-containing protein compare
ABZR87_RS04975 -3.5 -5.2 peptide deformylase compare
ABZR87_RS05590 -3.4 -3.3 orotate phosphoribosyltransferase compare
ABZR87_RS02590 -3.4 -11.3 3-dehydroquinate synthase compare
ABZR87_RS17145 -3.4 -18.7 AMP nucleosidase compare
ABZR87_RS00220 -3.3 -10.8 CysB family HTH-type transcriptional regulator compare
ABZR87_RS00185 -3.2 -6.4 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS13250 -3.2 -4.5 phosphoserine phosphatase SerB compare
ABZR87_RS00435 -3.2 -10.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS07050 -3.0 -2.0 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS00285 -3.0 -4.5 acetylornithine transaminase compare
ABZR87_RS09555 -3.0 -11.0 acyl-CoA dehydrogenase compare
ABZR87_RS12785 -2.9 -2.0 endopeptidase La compare
ABZR87_RS00205 -2.9 -3.5 DUF934 domain-containing protein compare
ABZR87_RS13375 -2.8 -9.9 NUDIX hydrolase compare
ABZR87_RS01685 -2.8 -8.9 histone H1-like DNA-binding protein compare
ABZR87_RS02480 -2.8 -3.7 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS06705 -2.7 -15.7 glutamate--cysteine ligase compare
ABZR87_RS06845 -2.6 -12.6 heme o synthase compare
ABZR87_RS12795 -2.6 -7.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS00195 -2.5 -4.5 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS11125 -2.5 -8.9 cell division protein ZapE compare
ABZR87_RS11815 -2.5 -10.8 [protein-PII] uridylyltransferase compare
ABZR87_RS10240 -2.4 -3.6 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS00350 -2.4 -6.9 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS09710 -2.4 -4.6 tRNA-Arg compare
ABZR87_RS10170 -2.4 -5.5 RseA family anti-sigma factor compare
ABZR87_RS09450 -2.3 -8.9 prephenate dehydratase compare
ABZR87_RS05350 -2.3 -6.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS11195 -2.3 -12.0 pseudouridine synthase compare
ABZR87_RS06710 -2.3 -15.3 glutathione synthase compare
ABZR87_RS08655 -2.2 -5.5 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS06715 -2.2 -5.3 PTS sugar transporter subunit IIA compare
ABZR87_RS01615 -2.2 -1.7 RNB domain-containing ribonuclease compare
ABZR87_RS00355 -2.1 -10.1 quinolinate synthase NadA compare
ABZR87_RS06745 -2.1 -6.6 S41 family peptidase compare
ABZR87_RS10400 -2.1 -5.5 hypothetical protein compare
ABZR87_RS13300 -2.1 -10.5 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS10175 -2.1 -6.2 MucB/RseB C-terminal domain-containing protein compare
ABZR87_RS12790 -2.0 -6.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS10085 -2.0 -2.2 Rne/Rng family ribonuclease compare
ABZR87_RS14115 -2.0 -3.1 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS16960 -2.0 -6.0 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS04125 -2.0 -7.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS11940 -1.9 -5.2 SsrA-binding protein SmpB compare
ABZR87_RS08660 -1.8 -6.6 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS14380 -1.8 -7.5 glutamate racemase compare
ABZR87_RS06030 -1.8 -1.9 AraC family transcriptional regulator compare
ABZR87_RS04945 -1.8 -2.8 DUF4390 domain-containing protein compare
ABZR87_RS16185 -1.7 -3.2 dCTP deaminase compare
ABZR87_RS00215 -1.7 -4.2 sulfite exporter TauE/SafE family protein compare
ABZR87_RS05140 -1.7 -2.8 ATP-binding protein compare
ABZR87_RS04940 -1.6 -6.7 PAS domain-containing sensor histidine kinase compare
ABZR87_RS07510 -1.6 -4.3 LysR family transcriptional regulator compare
ABZR87_RS10620 -1.6 -2.9 serine O-acetyltransferase compare
ABZR87_RS01605 -1.5 -8.7 shikimate dehydrogenase compare
ABZR87_RS07635 -1.5 -3.7 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS10785 -1.5 -7.3 exodeoxyribonuclease V subunit beta compare
ABZR87_RS16250 -1.5 -4.8 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS02630 -1.5 -4.7 iron donor protein CyaY compare
ABZR87_RS16180 -1.5 -5.9 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS00345 -1.5 -10.6 L-aspartate oxidase compare
ABZR87_RS17310 -1.5 -4.8 PadR family transcriptional regulator compare
ABZR87_RS08875 -1.5 -4.7 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II compare
ABZR87_RS00360 -1.4 -2.3 acyl-CoA desaturase compare
ABZR87_RS05130 -1.4 -1.5 CsbD family protein compare
ABZR87_RS01675 -1.4 -2.7 carbohydrate kinase family protein compare
ABZR87_RS11435 -1.4 -4.4 Mth938-like domain-containing protein compare
ABZR87_RS09200 -1.4 -11.2 long-chain fatty acid--CoA ligase compare
ABZR87_RS06400 -1.3 -8.5 response regulator transcription factor compare
ABZR87_RS16080 -1.3 -3.7 P-II family nitrogen regulator compare
ABZR87_RS08695 -1.3 -7.9 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS20555 -1.3 -3.5 helix-turn-helix transcriptional regulator compare
ABZR87_RS02325 -1.3 -3.7 cytochrome o ubiquinol oxidase subunit III compare
ABZR87_RS04785 -1.3 -6.8 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS07760 -1.3 -2.4 HlyC/CorC family transporter compare
ABZR87_RS10120 -1.3 -2.2 YceD family protein compare
ABZR87_RS06495 -1.3 -3.1 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS02225 -1.3 -8.7 ATP-binding protein compare
ABZR87_RS08700 -1.3 -5.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS10820 -1.3 -5.5 LysR substrate-binding domain-containing protein compare
ABZR87_RS11010 -1.2 -2.1 oxidative damage protection protein compare
ABZR87_RS00875 -1.2 -4.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS08680 -1.2 -5.2 glycosyltransferase compare
ABZR87_RS01035 -1.2 -3.7 histidine utilization repressor compare
ABZR87_RS07700 -1.2 -2.2 peptidylprolyl isomerase compare
ABZR87_RS22340 -1.2 -2.5 hypothetical protein compare
ABZR87_RS02020 -1.2 -8.0 long-chain fatty acid--CoA ligase compare
ABZR87_RS06395 -1.2 -3.9 response regulator compare
ABZR87_RS02575 -1.2 -4.5 transposase compare
ABZR87_RS14575 -1.2 -3.6 GntR family transcriptional regulator compare
ABZR87_RS02235 -1.2 -5.7 response regulator compare
ABZR87_RS10780 -1.2 -4.8 PD-(D/E)XK nuclease family protein compare
ABZR87_RS06385 -1.2 -6.8 CHASE3 domain-containing protein compare
ABZR87_RS10985 -1.1 -8.5 ribonuclease R compare
ABZR87_RS21285 -1.1 -2.7 TetR/AcrR family transcriptional regulator compare
ABZR87_RS14680 -1.1 -1.9 SDR family oxidoreductase compare
ABZR87_RS00605 -1.1 -6.8 hypothetical protein compare
ABZR87_RS11245 -1.1 -3.8 translational GTPase TypA compare
ABZR87_RS11015 -1.1 -4.4 amino-acid N-acetyltransferase compare
ABZR87_RS02440 -1.1 -5.5 twin-arginine translocase subunit TatC compare
ABZR87_RS18440 -1.1 -3.5 VOC family protein compare
ABZR87_RS17695 -1.1 -2.3 helix-turn-helix transcriptional regulator compare
ABZR87_RS14375 -1.1 -3.4 fumarate hydratase compare
ABZR87_RS15685 -1.1 -4.0 TIGR00730 family Rossman fold protein compare
ABZR87_RS17455 -1.0 -4.3 AraC family transcriptional regulator compare
ABZR87_RS02385 -1.0 -4.6 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS05000 -1.0 -7.7 LysR family transcriptional regulator compare
ABZR87_RS12800 -1.0 -3.7 trigger factor compare
ABZR87_RS02540 -1.0 -5.9 VacJ family lipoprotein compare
ABZR87_RS01745 -1.0 -3.6 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
ABZR87_RS08670 -1.0 -5.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
ABZR87_RS20730 -1.0 -1.8 hypothetical protein compare
ABZR87_RS14745 -1.0 -1.5 urease subunit gamma compare
ABZR87_RS13290 -1.0 -3.6 3-ketoacyl-ACP reductase compare
ABZR87_RS14495 -1.0 -3.4 site-specific DNA-methyltransferase compare
ABZR87_RS07730 -1.0 -2.0 lysophospholipid acyltransferase family protein compare
ABZR87_RS17485 -1.0 -3.8 enoyl-CoA hydratase/isomerase family protein compare
ABZR87_RS08665 -1.0 -5.1 GNAT family N-acetyltransferase compare
ABZR87_RS08025 -0.9 -4.3 DUF2946 family protein compare
ABZR87_RS06950 -0.9 -6.4 pitrilysin family protein compare
ABZR87_RS05005 -0.9 -7.4 AMP-binding protein compare
ABZR87_RS21140 -0.9 -2.0 dimethylsulfone monooxygenase SfnG compare
ABZR87_RS17475 -0.9 -5.3 3-hydroxyisobutyrate dehydrogenase compare
ABZR87_RS02380 -0.9 -7.0 cytochrome bc complex cytochrome b subunit compare
ABZR87_RS13645 -0.9 -0.9 hypothetical protein compare
ABZR87_RS15705 -0.9 -2.8 UvrD-helicase domain-containing protein compare
ABZR87_RS06695 -0.9 -4.0 P-II family nitrogen regulator compare
ABZR87_RS01640 -0.9 -3.0 TlpA disulfide reductase family protein compare
ABZR87_RS08730 -0.9 -8.2 nucleoside-diphosphate sugar epimerase/dehydratase compare
ABZR87_RS20665 -0.9 -2.9 IclR family transcriptional regulator compare
ABZR87_RS17315 -0.9 -3.0 MarR family transcriptional regulator compare
ABZR87_RS02680 -0.9 -6.3 c-type cytochrome compare
ABZR87_RS22405 -0.8 -1.2 hypothetical protein compare
ABZR87_RS13350 -0.8 -3.4 potassium transporter Kup compare
ABZR87_RS02320 -0.8 -1.5 cytochrome o ubiquinol oxidase subunit IV compare
ABZR87_RS09870 -0.8 -4.2 VWA domain-containing protein compare
ABZR87_RS10550 -0.8 -1.5 outer membrane protein assembly factor BamC compare
ABZR87_RS07290 -0.8 -2.2 DUF6691 family protein compare
ABZR87_RS02330 -0.8 -5.3 cytochrome o ubiquinol oxidase subunit I compare
ABZR87_RS20650 -0.8 -2.0 aspartate dehydrogenase compare
ABZR87_RS06955 -0.8 -6.1 pitrilysin family protein compare
ABZR87_RS23035 -0.8 -2.0 PIG-L family deacetylase compare
ABZR87_RS13175 -0.8 -1.3 tRNA-Leu compare
ABZR87_RS15810 -0.8 -3.3 hypothetical protein compare
ABZR87_RS07625 -0.8 -2.0 Holliday junction branch migration protein RuvA compare
ABZR87_RS02335 -0.8 -4.7 ubiquinol oxidase subunit II compare
ABZR87_RS23095 -0.8 -1.2 MarR family transcriptional regulator compare
ABZR87_RS05145 -0.8 -1.3 copper chaperone PCu(A)C compare
ABZR87_RS09635 -0.8 -1.3 ribosome small subunit-dependent GTPase A compare
ABZR87_RS10395 -0.8 -3.3 single-stranded-DNA-specific exonuclease RecJ compare
ABZR87_RS01980 -0.8 -1.4 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS08715 -0.8 -6.6 ATP-grasp domain-containing protein compare
ABZR87_RS06405 -0.8 -0.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Ralstonia sp. UNC404CL21Col in carbon source experiments

For carbon source Hexanoic acid across organisms