Experiment set9IT084 for Ralstonia sp. UNC404CL21Col

Compare to:

Sodium propionate carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS13250 -6.3 -4.3 phosphoserine phosphatase SerB compare
ABZR87_RS01810 -5.4 -3.7 glutamate 5-kinase compare
ABZR87_RS02565 -5.3 -6.3 glutamate synthase subunit beta compare
ABZR87_RS16745 -5.2 -9.9 methylisocitrate lyase compare
ABZR87_RS16740 -5.1 -8.6 2-methylcitrate synthase compare
ABZR87_RS00200 -5.1 -6.0 phosphoadenylyl-sulfate reductase compare
ABZR87_RS14490 -4.9 -11.4 tryptophan synthase subunit alpha compare
ABZR87_RS02640 -4.9 -17.6 diaminopimelate decarboxylase compare
ABZR87_RS13790 -4.8 -10.3 chorismate synthase compare
ABZR87_RS02140 -4.8 -20.2 anthranilate synthase component I compare
ABZR87_RS14535 -4.8 -8.5 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS16140 -4.6 -18.8 phosphoenolpyruvate carboxylase compare
ABZR87_RS00835 -4.6 -4.5 argininosuccinate synthase compare
ABZR87_RS02570 -4.6 -25.9 glutamate synthase-related protein compare
ABZR87_RS14540 -4.5 -8.1 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS07360 -4.5 -17.8 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS14950 -4.4 -5.3 acetolactate synthase small subunit compare
ABZR87_RS02595 -4.4 -11.6 shikimate kinase compare
ABZR87_RS02160 -4.4 -8.4 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS14500 -4.4 -17.1 tryptophan synthase subunit beta compare
ABZR87_RS14505 -4.4 -7.8 phosphoribosylanthranilate isomerase compare
ABZR87_RS16735 -4.4 -17.2 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
ABZR87_RS00285 -4.4 -3.0 acetylornithine transaminase compare
ABZR87_RS02145 -4.3 -3.3 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS22970 -4.3 -12.9 cystathionine gamma-synthase family protein compare
ABZR87_RS05100 -4.2 -7.0 RNA polymerase-binding protein DksA compare
ABZR87_RS09465 -4.2 -10.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS02155 -4.2 -9.3 anthranilate phosphoribosyltransferase compare
ABZR87_RS10565 -4.2 -4.0 cupin domain-containing protein compare
ABZR87_RS16170 -4.2 -7.4 argininosuccinate lyase compare
ABZR87_RS07060 -4.2 -18.2 RNA polymerase factor sigma-54 compare
ABZR87_RS07665 -4.1 -13.4 aminopeptidase P N-terminal domain-containing protein compare
ABZR87_RS09450 -4.1 -8.0 prephenate dehydratase compare
ABZR87_RS05170 -4.0 -4.7 acetylglutamate kinase compare
ABZR87_RS20880 -4.0 -11.6 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS16660 -3.9 -5.4 helix-turn-helix domain-containing protein compare
ABZR87_RS14530 -3.9 -12.4 3-isopropylmalate dehydrogenase compare
ABZR87_RS11440 -3.9 -10.3 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS05200 -3.9 -16.6 homoserine O-acetyltransferase compare
ABZR87_RS11925 -3.9 -17.1 phosphoenolpyruvate synthase compare
ABZR87_RS10610 -3.8 -2.6 inositol monophosphatase family protein compare
ABZR87_RS09935 -3.8 -5.2 amino acid aminotransferase compare
ABZR87_RS07380 -3.8 -16.1 FAD/FMN-binding oxidoreductase compare
ABZR87_RS00185 -3.8 -5.1 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS00435 -3.7 -8.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS14955 -3.7 -8.8 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS20875 -3.7 -9.2 LysR family transcriptional regulator compare
ABZR87_RS09445 -3.7 -12.8 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS16730 -3.6 -6.9 2-methylaconitate cis-trans isomerase PrpF compare
ABZR87_RS02590 -3.6 -11.4 3-dehydroquinate synthase compare
ABZR87_RS10240 -3.5 -2.4 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS00195 -3.5 -5.4 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS05305 -3.5 -14.5 TetR family transcriptional regulator compare
ABZR87_RS00190 -3.5 -12.6 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS17145 -3.3 -19.0 AMP nucleosidase compare
ABZR87_RS00220 -3.2 -12.9 CysB family HTH-type transcriptional regulator compare
ABZR87_RS08630 -3.2 -9.0 dihydroorotase compare
ABZR87_RS01110 -3.1 -10.0 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS16750 -3.1 -13.0 propionate catabolism operon regulatory protein PrpR compare
ABZR87_RS04865 -3.0 -6.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS13300 -3.0 -11.6 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS00210 -3.0 -11.6 nitrite/sulfite reductase compare
ABZR87_RS08625 -3.0 -3.5 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS15440 -2.9 -5.1 ribonuclease G compare
ABZR87_RS09710 -2.9 -5.7 tRNA-Arg compare
ABZR87_RS06770 -2.9 -6.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS00355 -2.9 -11.7 quinolinate synthase NadA compare
ABZR87_RS11125 -2.8 -8.1 cell division protein ZapE compare
ABZR87_RS12785 -2.8 -2.7 endopeptidase La compare
ABZR87_RS00205 -2.7 -4.0 DUF934 domain-containing protein compare
ABZR87_RS14115 -2.7 -4.4 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS09635 -2.7 -3.1 ribosome small subunit-dependent GTPase A compare
ABZR87_RS00350 -2.7 -6.4 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS13290 -2.7 -4.5 3-ketoacyl-ACP reductase compare
ABZR87_RS08695 -2.5 -9.6 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS12795 -2.4 -6.6 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS21815 -2.4 -1.4 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS01675 -2.4 -3.1 carbohydrate kinase family protein compare
ABZR87_RS13475 -2.4 -9.8 PAS domain S-box protein compare
ABZR87_RS16270 -2.3 -2.7 cold-shock protein compare
ABZR87_RS07700 -2.3 -2.6 peptidylprolyl isomerase compare
ABZR87_RS20730 -2.3 -2.4 hypothetical protein compare
ABZR87_RS07955 -2.3 -12.6 sensor histidine kinase compare
ABZR87_RS01645 -2.3 -6.5 type II 3-dehydroquinate dehydratase compare
ABZR87_RS05590 -2.3 -3.3 orotate phosphoribosyltransferase compare
ABZR87_RS04995 -2.3 -3.3 DNA topoisomerase III compare
ABZR87_RS07635 -2.2 -3.9 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS14360 -2.2 -10.7 acetate--CoA ligase compare
ABZR87_RS12790 -2.2 -5.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS09515 -2.1 -1.4 cysteine synthase CysM compare
ABZR87_RS06705 -2.1 -12.3 glutamate--cysteine ligase compare
ABZR87_RS16185 -2.1 -2.6 dCTP deaminase compare
ABZR87_RS07960 -2.0 -13.1 response regulator transcription factor compare
ABZR87_RS10085 -2.0 -2.2 Rne/Rng family ribonuclease compare
ABZR87_RS00875 -2.0 -4.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS06710 -1.9 -12.0 glutathione synthase compare
ABZR87_RS17310 -1.9 -5.6 PadR family transcriptional regulator compare
ABZR87_RS16080 -1.9 -4.2 P-II family nitrogen regulator compare
ABZR87_RS13285 -1.9 -11.1 polyhydroxyalkanoate synthesis repressor PhaR compare
ABZR87_RS21795 -1.8 -6.8 NUDIX domain-containing protein compare
ABZR87_RS04125 -1.8 -7.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS02480 -1.8 -3.8 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS04975 -1.8 -2.7 peptide deformylase compare
ABZR87_RS07625 -1.8 -4.2 Holliday junction branch migration protein RuvA compare
ABZR87_RS00970 -1.8 -1.2 molecular chaperone DnaJ compare
ABZR87_RS16250 -1.7 -4.7 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS00215 -1.7 -5.0 sulfite exporter TauE/SafE family protein compare
ABZR87_RS16960 -1.7 -4.7 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS01605 -1.7 -8.1 shikimate dehydrogenase compare
ABZR87_RS13175 -1.7 -1.7 tRNA-Leu compare
ABZR87_RS04785 -1.7 -7.9 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS11760 -1.7 -1.2 membrane protein compare
ABZR87_RS11815 -1.7 -8.5 [protein-PII] uridylyltransferase compare
ABZR87_RS02380 -1.7 -10.3 cytochrome bc complex cytochrome b subunit compare
ABZR87_RS02385 -1.6 -3.8 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS06845 -1.6 -7.7 heme o synthase compare
ABZR87_RS07050 -1.6 -1.3 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS11195 -1.5 -8.1 pseudouridine synthase compare
ABZR87_RS11245 -1.5 -5.0 translational GTPase TypA compare
ABZR87_RS05350 -1.5 -5.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS02575 -1.5 -5.5 transposase compare
ABZR87_RS14890 -1.5 -1.4 preprotein translocase subunit SecG compare
ABZR87_RS11940 -1.5 -2.9 SsrA-binding protein SmpB compare
ABZR87_RS06645 -1.5 -3.1 TlpA disulfide reductase family protein compare
ABZR87_RS16180 -1.5 -5.5 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS10820 -1.5 -4.7 LysR substrate-binding domain-containing protein compare
ABZR87_RS09615 -1.5 -1.3 50S ribosomal protein L19 compare
ABZR87_RS17440 -1.4 -1.4 (2Fe-2S)-binding protein compare
ABZR87_RS03195 -1.4 -10.4 cation diffusion facilitator family transporter compare
ABZR87_RS02440 -1.4 -7.3 twin-arginine translocase subunit TatC compare
ABZR87_RS02375 -1.4 -8.0 cytochrome c1 compare
ABZR87_RS02445 -1.4 -3.9 Sec-independent protein translocase protein TatB compare
ABZR87_RS06715 -1.4 -2.9 PTS sugar transporter subunit IIA compare
ABZR87_RS08700 -1.4 -5.0 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS11390 -1.4 -8.2 PhoH family protein compare
ABZR87_RS08660 -1.4 -6.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS01035 -1.4 -4.3 histidine utilization repressor compare
ABZR87_RS02020 -1.4 -8.4 long-chain fatty acid--CoA ligase compare
ABZR87_RS10400 -1.3 -4.0 hypothetical protein compare
ABZR87_RS11015 -1.3 -7.1 amino-acid N-acetyltransferase compare
ABZR87_RS14675 -1.3 -1.0 glyoxalase compare
ABZR87_RS10780 -1.3 -4.9 PD-(D/E)XK nuclease family protein compare
ABZR87_RS13315 -1.3 -7.6 RluA family pseudouridine synthase compare
ABZR87_RS14330 -1.3 -1.1 hypothetical protein compare
ABZR87_RS16125 -1.3 -3.4 heme biosynthesis protein HemY compare
ABZR87_RS10785 -1.3 -5.6 exodeoxyribonuclease V subunit beta compare
ABZR87_RS02680 -1.3 -8.0 c-type cytochrome compare
ABZR87_RS00325 -1.3 -2.4 peptidylprolyl isomerase compare
ABZR87_RS11675 -1.3 -2.8 disulfide bond formation protein B compare
ABZR87_RS09625 -1.3 -7.6 CobD/CbiB family protein compare
ABZR87_RS11435 -1.2 -3.5 Mth938-like domain-containing protein compare
ABZR87_RS06385 -1.2 -7.4 CHASE3 domain-containing protein compare
ABZR87_RS00625 -1.2 -2.1 hypothetical protein compare
ABZR87_RS07950 -1.2 -6.6 sodium/substrate symporter small subunit compare
ABZR87_RS14495 -1.2 -3.6 site-specific DNA-methyltransferase compare
ABZR87_RS22340 -1.2 -2.3 hypothetical protein compare
ABZR87_RS00360 -1.2 -2.0 acyl-CoA desaturase compare
ABZR87_RS01980 -1.2 -2.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS14355 -1.2 -7.9 sodium:solute symporter family protein conserved
ABZR87_RS09085 -1.1 -7.1 DUF883 family protein compare
ABZR87_RS06745 -1.1 -4.5 S41 family peptidase compare
ABZR87_RS01615 -1.1 -2.0 RNB domain-containing ribonuclease compare
ABZR87_RS09075 -1.1 -4.0 DUF3318 domain-containing protein compare
ABZR87_RS09035 -1.1 -5.0 LacI family DNA-binding transcriptional regulator compare
ABZR87_RS20490 -1.1 -4.4 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
ABZR87_RS09460 -1.1 -3.2 prephenate dehydrogenase compare
ABZR87_RS05580 -1.1 -2.2 diaminopimelate epimerase compare
ABZR87_RS08655 -1.1 -3.5 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS06400 -1.1 -5.4 response regulator transcription factor compare
ABZR87_RS10620 -1.0 -3.3 serine O-acetyltransferase compare
ABZR87_RS08645 -1.0 -0.8 dTDP-glucose 4,6-dehydratase compare
ABZR87_RS11770 -1.0 -4.9 succinyldiaminopimelate transaminase compare
ABZR87_RS04945 -1.0 -1.9 DUF4390 domain-containing protein compare
ABZR87_RS10120 -1.0 -1.2 YceD family protein compare
ABZR87_RS13350 -1.0 -3.9 potassium transporter Kup compare
ABZR87_RS10930 -1.0 -2.1 outer membrane protein assembly factor BamB compare
ABZR87_RS08680 -1.0 -5.2 glycosyltransferase compare
ABZR87_RS19320 -1.0 -1.3 hypothetical protein compare
ABZR87_RS11010 -1.0 -1.4 oxidative damage protection protein compare
ABZR87_RS18910 -1.0 -1.8 DUF2239 family protein compare
ABZR87_RS06810 -1.0 -4.0 cytochrome c oxidase assembly protein compare
ABZR87_RS07705 -1.0 -3.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS07730 -1.0 -1.8 lysophospholipid acyltransferase family protein compare
ABZR87_RS02035 -1.0 -4.3 substrate-binding domain-containing protein compare
ABZR87_RS03075 -1.0 -6.7 AGE family epimerase/isomerase compare
ABZR87_RS07605 -1.0 -2.8 D-aminoacyl-tRNA deacylase compare
ABZR87_RS07620 -1.0 -3.0 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS04295 -1.0 -3.6 HU family DNA-binding protein compare
ABZR87_RS22915 -1.0 -6.4 glucose-6-phosphate dehydrogenase compare
ABZR87_RS17595 -1.0 -1.9 hypothetical protein compare
ABZR87_RS05130 -0.9 -1.0 CsbD family protein compare
ABZR87_RS12970 -0.9 -1.9 putative holin compare
ABZR87_RS08670 -0.9 -5.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
ABZR87_RS15500 -0.9 -4.6 glycosyltransferase compare
ABZR87_RS17650 -0.9 -4.5 TetR/AcrR family transcriptional regulator compare
ABZR87_RS01055 -0.9 -5.5 heat-inducible transcriptional repressor HrcA compare
ABZR87_RS07475 -0.9 -6.9 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABZR87_RS01420 -0.9 -1.7 outer membrane protein assembly factor BamE compare
ABZR87_RS18560 -0.9 -2.8 NmrA family NAD(P)-binding protein compare
ABZR87_RS00795 -0.9 -3.4 site-specific tyrosine recombinase XerD compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium propionate in Ralstonia sp. UNC404CL21Col

For carbon source Sodium propionate across organisms