Experiment set9IT084 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Varel_Bryant_medium_Glucose with Geneticin G418 0.2 mM

200 most important genes:

  gene name fitness t score description  
BT3395 -4.5 -6.1 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT3757 -4.4 -7.3 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT2401 -4.2 -7.0 threonine synthase (NCBI ptt file) compare
BT3733 -4.2 -8.5 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT3758 -4.2 -2.9 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT3761 -4.1 -2.8 N-succinylglutamate synthase (from data) compare
BT3759 -4.1 -4.9 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3193 -4.0 -12.3 putative coenzyme A transferase (NCBI ptt file) compare
BT2402 -3.9 -10.2 homoserine phosphotransferase HomK (from data) compare
BT1607 -3.9 -2.7 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3320 -3.9 -5.8 dihydrodipicolinate reductase (NCBI ptt file) compare
BT1857 -3.8 -7.3 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT1983 -3.8 -6.3 hemolysin III (NCBI ptt file) compare
BT1377 -3.7 -2.5 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT0892 -3.7 -2.2 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3718 -3.6 -8.1 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT2837 -3.6 -14.5 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT3933 -3.6 -5.4 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1859 -3.5 -4.2 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT3918 -3.5 -3.4 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT3760 -3.5 -3.4 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT3361 -3.5 -5.8 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT0503 -3.5 -3.3 hypothetical protein (NCBI ptt file) compare
BT3549 -3.5 -6.6 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT2403 -3.5 -8.3 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT1153 -3.5 -5.2 phosphoserine aminotransferase (NCBI ptt file) compare
BT2074 -3.5 -7.0 ketol-acid reductoisomerase (NCBI ptt file) compare
BT1860 -3.4 -3.3 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT3164 -3.4 -10.1 quinolinate synthetase A (NCBI ptt file) compare
BT1374 -3.4 -3.3 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT0532 -3.4 -5.1 anthranilate synthase component I (NCBI ptt file) compare
BT3035 -3.3 -15.0 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT2415 -3.3 -10.6 aspartate aminotransferase (NCBI ptt file) compare
BT1861 -3.3 -5.9 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT3184 -3.3 -16.3 L-aspartate oxidase (NCBI ptt file) compare
BT2836 -3.2 -15.6 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT0202 -3.2 -4.9 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT2417 -3.2 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1375 -3.1 -11.7 aspartokinase (NCBI ptt file) compare
BT3717 -3.1 -3.7 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT1843 -3.0 -6.4 adenylosuccinate synthetase (NCBI ptt file) compare
BT1379 -3.0 -3.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT1858 -3.0 -4.9 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT0738 -3.0 -2.0 serine hydroxymethyltransferase (NCBI ptt file) compare
BT2003 -2.9 -1.9 putative membrane peptidase (NCBI ptt file) compare
BT2078 -2.9 -9.1 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT2076 -2.9 -5.2 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT2129 -2.8 -3.8 aspartate--ammonia ligase (NCBI ptt file) compare
BT0700 -2.8 -3.8 GTP pyrophosphokinase (NCBI ptt file) compare
BT0891 -2.8 -1.9 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT2077 -2.8 -5.0 acetolactate synthase large subunit (NCBI ptt file) compare
BT4610 -2.8 -2.6 RecA (NCBI ptt file) compare
BT3936 -2.8 -1.9 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT2843 -2.7 -5.9 integrase (NCBI ptt file) compare
BT3980 -2.7 -1.8 hypothetical protein (NCBI ptt file) compare
BT1844 -2.7 -4.0 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT1270 -2.7 -1.8 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1970 -2.6 -7.2 glutamate dehydrogenase (NCBI ptt file) compare
BT0530 -2.6 -2.5 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT3719 -2.6 -3.8 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT1381 -2.6 -3.9 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT0201 -2.6 -3.8 histidinol dehydrogenase (NCBI ptt file) compare
BT0200 -2.5 -1.7 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT2546 -2.5 -4.2 transcriptional regulator (NCBI ptt file) compare
BT0527 -2.5 -2.4 tryptophan synthase alpha chain (NCBI ptt file) compare
BT3253 -2.4 -1.7 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0704 -2.4 -1.3 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT2932 -2.4 -3.1 transcriptional regulator (NCBI ptt file) compare
BT0529 -2.4 -1.6 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT1380 -2.4 -2.3 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT1445 -2.3 -3.5 putative biotin synthesis protein bioC (NCBI ptt file) compare
BT0528 -2.3 -3.1 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT3022 -2.3 -2.0 hypothetical protein (NCBI ptt file) compare
BT1378 -2.3 -1.6 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT1421 -2.3 -4.4 hypothetical protein (NCBI ptt file) compare
BT1444 -2.3 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1894 -2.3 -6.3 TPR-repeat-containing proteins (NCBI ptt file) compare
BT0397 -2.3 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT2418 -2.2 -3.9 hypothetical protein (NCBI ptt file) compare
BT0378 -2.2 -2.5 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT0203 -2.2 -1.5 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT3373 -2.2 -4.5 spermidine n1-acetyltransferase (NCBI ptt file) compare
BT1752 -2.1 -1.5 hypothetical protein (NCBI ptt file) compare
BT2080 -2.1 -3.5 L-cysteine desulfidase cdsB (from data) compare
BT3979 -2.1 -3.1 putative methyltransferase (NCBI ptt file) compare
BT3224 -2.1 -3.5 putative lysine decarboxylase (NCBI ptt file) compare
BT2539 -2.1 -3.8 rubredoxin (NCBI ptt file) compare
BT3220 -2.0 -10.2 TPR-repeat-containing protein (NCBI ptt file) compare
BT3195 -2.0 -3.9 conserved hypothetical protein (NCBI ptt file) compare
BT1353 -2.0 -1.9 glycosyltransferase (NCBI ptt file) compare
BT3223 -2.0 -3.0 hypothetical protein (NCBI ptt file) compare
BT0771 -2.0 -4.2 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT3370 -2.0 -1.3 putative glycosyltransferase yibD (NCBI ptt file) compare
BT0067 -1.9 -2.3 hypothetical protein (NCBI ptt file) compare
BT1420 -1.9 -4.5 conserved hypothetical protein (NCBI ptt file) compare
BT1834 -1.9 -4.4 putative hydrogenase (NCBI ptt file) compare
BT1476 -1.9 -2.9 aspartate aminotransferase (NCBI ptt file) compare
BT1979 -1.9 -3.3 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT3770 -1.9 -1.3 transcriptional regulator (NCBI ptt file) compare
BT4672 -1.9 -2.7 hypothetical protein (NCBI ptt file) compare
BT0740 -1.8 -1.5 flavoredoxin (NCBI ptt file) compare
BT3074 -1.8 -7.4 conserved hypothetical protein (NCBI ptt file) compare
BT0923 -1.8 -1.6 putative periplasmic protein (NCBI ptt file) compare
BT4674 -1.8 -4.8 hypothetical protein (NCBI ptt file) compare
BT1152 -1.7 -1.7 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT1446 -1.7 -5.1 dethiobiotin synthetase (NCBI ptt file) compare
BT3394 -1.7 -6.6 putative arginine decarboxylase (NCBI ptt file) compare
BT2302 -1.7 -1.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4618 -1.7 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1336 -1.7 -2.9 putative translation initiation inhibitor (NCBI ptt file) compare
BT4206 -1.7 -1.1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file) compare
BT3389 -1.7 -4.5 hypothetical protein (NCBI ptt file) compare
BT0298 -1.7 -2.6 cation efflux system protein (outer membrane protein) (NCBI ptt file) compare
BT0100 -1.6 -3.2 hypothetical protein (NCBI ptt file) compare
BT2173 -1.6 -6.7 hypothetical protein (NCBI ptt file) compare
BT4668 -1.6 -2.1 arabinogalactan endo-1,4-beta-galactosidase (NCBI ptt file) compare
BT3075 -1.6 -8.1 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT1442 -1.6 -4.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI ptt file) compare
p5482_02 -1.6 -5.4 hypothetical protein (NCBI) compare
BT4778 -1.6 -1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0533 -1.6 -1.1 tryptophan synthase beta chain (NCBI ptt file) compare
BT3342 -1.6 -3.2 hypothetical protein (NCBI ptt file) compare
BT0531 -1.6 -1.5 anthranilate synthase component II (NCBI ptt file) compare
BT4002 -1.6 -1.4 ATPase, ParA family (NCBI ptt file) compare
BT3372 -1.6 -4.5 glycosyltransferase (NCBI ptt file) compare
BT3981 -1.6 -2.7 hypothetical protein (NCBI ptt file) compare
BT0827 -1.6 -2.8 hypothetical protein (NCBI ptt file) compare
BT4644 -1.5 -2.8 putative anti-sigma factor (NCBI ptt file) compare
BT0776 -1.5 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0692 -1.5 -2.2 putative calcineurin superfamily phosphohydrolase (NCBI ptt file) compare
BT4649 -1.5 -1.9 hypothetical protein (NCBI ptt file) compare
BT4211 -1.5 -1.4 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT1202 -1.5 -1.4 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT2153 -1.5 -3.1 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT0747 -1.5 -1.0 putative phosphatidylinositol-4-phosphate 5-kinase (NCBI ptt file) compare
BT3368 -1.5 -2.1 putative glycosyltransferase (NCBI ptt file) compare
BT1367 -1.5 -3.0 hydrolase, metal-dependent (NCBI ptt file) compare
BT0383 -1.5 -3.6 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT2170 -1.5 -3.0 hypothetical protein (NCBI ptt file) compare
BT4017 -1.5 -2.1 hypothetical protein (NCBI ptt file) compare
BT1363 -1.5 -1.3 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT2155 -1.5 -3.1 hypothetical protein (NCBI ptt file) compare
BT1835 -1.5 -3.6 biotin synthase (NCBI ptt file) compare
BT2142 -1.4 -1.8 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT4490 -1.4 -3.0 hypothetical protein (NCBI ptt file) compare
BT1982 -1.4 -1.8 hypothetical protein (NCBI ptt file) compare
BT1836 -1.4 -5.4 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT0414 -1.4 -1.7 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT0876 -1.4 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1608 -1.4 -4.1 capsule biosynthesis protein capA (NCBI ptt file) compare
BT3211 -1.4 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2172 -1.4 -8.0 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1854 -1.4 -1.6 putative membrane-associated phospholipid phosphatase (NCBI ptt file) compare
BT3371 -1.4 -2.9 putative glycosyltransferase yibD (NCBI ptt file) compare
BT3072 -1.4 -5.2 collagenase precursor (NCBI ptt file) compare
BT1733 -1.4 -2.5 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT2148 -1.4 -2.9 glycosyltransferase (NCBI ptt file) compare
BT1080 -1.4 -1.7 hypothetical protein (NCBI ptt file) compare
BT3374 -1.4 -4.6 putative carbamoyl-phosphate-synthetase (NCBI ptt file) compare
BT0603 -1.4 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1837 -1.4 -3.7 putative GTP-binding protein, putative GTPase (NCBI ptt file) compare
BT2088 -1.4 -2.2 hypothetical protein (NCBI ptt file) compare
BT3894 -1.4 -3.5 putative methyltransferase (NCBI ptt file) compare
BT1352 -1.4 -3.3 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT1565 -1.3 -1.6 hypothetical protein (NCBI ptt file) compare
BT4386 -1.3 -1.6 hypoxanthine-guanine phosphoribosyltransferase (NCBI ptt file) compare
BT0762 -1.3 -2.6 hypothetical protein (NCBI ptt file) compare
BT0926 -1.3 -3.0 ABC-type transport, permease protein (NCBI ptt file) compare
BT0767 -1.3 -2.8 putative para-aminobenzoate synthase component I (NCBI ptt file) compare
BT0479 -1.3 -1.6 putative glycosyltransferase (NCBI ptt file) compare
BT1055 -1.3 -1.6 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT2185 -1.3 -3.7 hypothetical protein (NCBI ptt file) compare
BT3268 -1.3 -2.0 glucose-inhibited division protein A (NCBI ptt file) compare
BT1564 -1.3 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3210 -1.3 -1.6 cell division protein FtsX (NCBI ptt file) compare
BT4562 -1.2 -1.1 hypothetical protein (NCBI ptt file) compare
BT0959 -1.2 -3.3 conserved hypothetical protein (NCBI ptt file) compare
BT1348 -1.2 -4.1 CDP-abequose synthase (NCBI ptt file) compare
BT0613 -1.2 -1.8 putative membrane protein involved in polysaccharide export (NCBI ptt file) compare
BT0561 -1.2 -3.0 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT3819 -1.2 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0281 -1.2 -2.1 putative DNA-binding protein (NCBI ptt file) compare
BT0878 -1.2 -1.1 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT0519 -1.2 -2.1 hypothetical protein (NCBI ptt file) compare
BT1954 -1.2 -4.0 putative surface layer protein (NCBI ptt file) compare
BT1698 -1.2 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0043 -1.2 -1.8 putative glycosyltransferase (NCBI ptt file) compare
BT0560 -1.2 -2.0 outer membrane efflux protein (NCBI ptt file) compare
BT0702 -1.2 -1.5 chloramphenicol acetyltransferase (CAT-III) (NCBI ptt file) compare
BT0063 -1.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT4198 -1.2 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT3376 -1.2 -4.6 nucleotide sugar transaminase (NCBI ptt file) compare
BT1361 -1.2 -3.3 DNA repair protein recN (Recombination protein N) (NCBI ptt file) compare
BT3117 -1.2 -2.1 putative oxidoreductase (NCBI ptt file) compare
BT3554 -1.1 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT3887 -1.1 -3.3 hypothetical protein (NCBI ptt file) compare
BT4515 -1.1 -2.7 hypothetical protein (NCBI ptt file) compare
BT0679 -1.1 -1.7 cation efflux system protein czcB (NCBI ptt file) compare
BT1470 -1.1 -1.8 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0089 -1.1 -1.6 conserved protein found in conjugate transposon (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in stress experiments

For stress Geneticin G418 across organisms