Experiment set9IT080 for Sinorhizobium meliloti 1021

Compare to:

Protocatechuic Acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc04296 +1.9 1.2 cell division protein FtsZ compare
SMc01764 +1.9 14.2 arginyl-tRNA-protein transferase compare
SMc02435 +1.6 2.7 methyltransferase compare
SMc03127 +1.4 2.1 ABC transporter permease compare
SMc04454 +1.4 6.5 ABC transporter ATP-binding protein compare
SMc02084 +1.3 1.2 biopolymer transport transmembrane protein compare
SMc00794 +1.3 9.0 two-component response regulator compare
SMc04043 +1.2 5.9 hypothetical protein compare
SMc02149 +1.2 1.5 hypothetical protein compare
SMc01506 +1.1 6.9 RNA polymerase sigma factor compare
SMc03850 +1.1 1.1 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc03834 +1.1 2.0 pterin-4-alpha-carbinolamine dehydratase compare
SMa0543 +1.1 2.5 hypothetical protein compare
SMc00656 +1.1 2.3 hypothetical protein compare
SMc02903 +1.1 6.0 hypothetical protein compare
SMc02693 +1.1 1.9 peptidyl-tRNA hydrolase compare
SMc01757 +1.1 2.3 hypothetical protein compare
SMc00648 +1.1 3.3 hypothetical protein compare
SMc00053 +1.0 0.8 monovalent cation/H+ antiporter subunit C compare
SMc01023 +1.0 4.0 triosephosphate isomerase compare
SMc02234 +0.9 1.8 hypothetical protein compare
SMa1056 +0.9 2.4 transcriptional regulator compare
SMc04456 +0.9 4.2 chaperone protein compare
SMa0126 +0.9 1.8 CspA8 Cold shock family protein compare
SMc01933 +0.9 1.8 hypothetical protein compare
SM_b20597 +0.9 3.4 hypothetical protein compare
SMc02906 +0.9 1.0 hypothetical protein compare
SM_b20323 +0.9 1.2 transcriptional regulator compare
SMc03774 +0.8 2.5 hypothetical protein compare
SMc01504 +0.8 4.7 two-component response regulator compare
SMa2168 +0.8 1.8 tRNA-Met compare
SMc00012 +0.8 1.2 cytochrome C oxidase assembly protein compare
SMc03066 +0.8 1.6 hypothetical protein compare
SMc02306 +0.8 1.3 hypothetical protein compare
SM_b20143 +0.8 1.3 oligopeptide ABC transporter permease compare
SMc00588 +0.8 1.0 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc02617 +0.8 2.2 hypothetical protein compare
SMc03983 +0.8 5.4 fructose-bisphosphate aldolase class I protein compare
SMc00944 +0.8 3.3 hypothetical protein compare
SMc00854 +0.8 1.5 hypothetical protein compare
SM_b20758 +0.8 1.3 ArsR family transcriptional regulator compare
SMc01641 +0.8 2.6 carnitinyl-CoA dehydratase compare
SM_b21509 +0.8 1.6 plasmid stability protein compare
SMc03051 +0.8 1.8 flagellar biosynthesis repressor FlbT compare
SMc01833 +0.7 1.5 hypothetical protein compare
SMc00169 +0.7 6.1 malic enzyme compare
SMc00987 +0.7 1.5 hypothetical protein compare
SMa1643 +0.7 1.9 hypothetical protein compare
SMc02697 +0.7 0.9 hypothetical protein compare
SMa2253 +0.7 1.6 hypothetical protein compare
SMa1808 +0.7 2.3 hypothetical protein compare
SMc02897 +0.7 1.8 cytochrome C transmembrane protein compare
SMc02373 +0.7 1.2 hypothetical protein compare
SMc03855 +0.7 2.3 hypothetical protein compare
SMc01330 +0.7 2.8 transcriptional regulator compare
SMc02904 +0.7 1.5 hypothetical protein compare
SMc02140 +0.7 0.4 phosphate regulon transcriptional regulatory protein compare
SMc02787 +0.7 1.9 hypothetical protein compare
SMa0085 +0.7 2.5 dehydrogenase compare
SMc02631 +0.7 1.2 hypothetical protein compare
SMc01178 +0.7 1.1 multidrug transmembrane resistance signal peptide protein compare
SM_b20011 +0.7 2.4 hypothetical protein compare
SM_b20260 +0.7 1.7 hypothetical protein compare
SMc00719 +0.7 1.7 hypoxanthine-guanine phosphoribosyltransferase compare
SMc02338 +0.7 0.9 periplasmic binding ABC transporter protein compare
SMa1153 +0.7 2.8 hypothetical protein compare
SM_b20547 +0.7 1.9 hypothetical protein compare
SMc04246 +0.7 1.6 transmembrane signal peptide protein compare
SMc02865 +0.7 1.8 acetyltransferase compare
SMa1933 +0.7 1.4 LysR family transcriptional regulator compare
SMc01262 +0.7 3.0 peptide deformylase compare
SMc00806 +0.7 1.6 hypothetical protein compare
SMa0121 +0.7 1.4 hypothetical protein compare
SMc01723 +0.7 1.1 hypothetical protein compare
SMc01242 +0.7 1.0 signal peptide protein compare
SMc00838 +0.7 3.7 hypothetical protein compare
SMc03969 +0.7 3.4 hypothetical protein compare
SMa1261 +0.6 3.4 hypothetical protein compare
SMc02174 +0.6 1.9 hypothetical protein compare
SMc02739 +0.6 2.4 glycine betaine transport ATP-binding ABC transporter protein compare
SMa0144 +0.6 0.7 hypothetical protein compare
SMc03184 +0.6 0.9 PH adaptation potassium efflux system G transmembrane protein compare
SMa0431 +0.6 1.1 hypothetical protein compare
SMc01204 +0.6 3.4 transmembrane oxidoreductase compare
SM_b20387 +0.6 1.0 transcriptional regulator compare
SMa1002 +0.6 1.2 hypothetical protein compare
SMa1232 +0.6 2.9 NapC membrane-bound tetraheme cytochrome c subunit compare
SMc03999 +0.6 1.3 hypothetical protein compare
SMc00194 +0.6 2.3 hypothetical protein compare
SMc02388 +0.6 2.0 hypothetical protein compare
SMc03289 +0.6 1.9 hypothetical protein compare
SMc01519 +0.6 1.3 hypothetical protein compare
SM_b20294 +0.6 0.9 transcriptional regulator NanR compare
SMa1658 +0.6 0.9 hypothetical protein compare
SMc01717 +0.6 2.4 mercuric reductase compare
SMc02232 +0.6 1.3 hypothetical protein compare
SMc01592 +0.6 2.9 transcriptional regulator compare
SMc03849 +0.6 0.4 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02058 +0.6 1.9 YAJC protein compare
SM_b21678 +0.6 1.9 hypothetical protein compare
SMc01346 +0.6 2.2 leucyl/phenylalanyl-tRNA--protein transferase compare
SM_b22001 +0.6 1.2 hypothetical protein compare
SMc01456 +0.6 3.5 hypothetical protein compare
SMc01522 +0.6 0.5 hypothetical protein compare
SMc01176 +0.6 1.7 hypothetical protein compare
SMc03120 +0.6 1.5 ABC transporter ATP-binding protein compare
SMc04432 +0.6 2.1 hypothetical protein compare
SMc02718 +0.6 0.6 hypothetical protein compare
SMc02505 +0.6 0.7 hypothetical protein compare
SMc00513 +0.6 2.2 amino acid-binding periplasmic protein compare
SMc03210 +0.6 1.5 transcriptional regulator compare
SMc02333 +0.6 2.0 hypothetical protein compare
SMc04189 +0.6 1.9 hypothetical protein compare
SMc00829 +0.6 1.6 transcriptional regulator compare
SMc04233 +0.6 1.5 hypothetical protein compare
SMa1053 +0.6 1.1 hypothetical protein compare
SMa1323 +0.6 1.5 Transcription regulator compare
SMc00088 +0.6 0.7 hypothetical protein compare
SM_b21665 +0.6 1.3 hypothetical protein compare
SMa1161 +0.6 2.0 hypothetical protein compare
SMc00468 +0.5 2.9 hypothetical protein compare
SMc02521 +0.5 1.8 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc00246 +0.5 4.0 quinone oxidoreductase compare
SMc02896 +0.5 2.7 branched-chain amino acid aminotransferase compare
SMa1276 +0.5 1.7 NorC nitric oxide reductase, small subunit compare
SMc01535 +0.5 2.0 hypothetical protein compare
SMc03092 +0.5 1.4 transcriptional regulator compare
SMc01241 +0.5 1.4 hypothetical protein compare
SMc02842 +0.5 2.5 hypothetical protein compare
SMa1176 +0.5 0.9 hypothetical protein compare
SMc04262 +0.5 3.3 6-phosphogluconate dehydrogenase compare
SM_b21400 +0.5 1.8 hypothetical protein compare
SMc00880 +0.5 1.1 oxidoreductase compare
SMa0429 +0.5 1.7 hypothetical protein compare
SMa0265 +0.5 1.2 dehydrogenase compare
SM_b20050 +0.5 1.4 hypothetical protein compare
SMc01232 +0.5 2.2 hypothetical protein compare
SMc01698 +0.5 3.0 oxidoreductase compare
SMc00496 +0.5 0.7 hypothetical protein compare
SMc01455 +0.5 1.4 D-lactate dehydrogenase (cytochrome) protein compare
SMc04138 +0.5 1.8 oxidoreductase compare
SMa1918 +0.5 2.5 hypothetical protein compare
SMc02874 +0.5 2.8 N-acetylmuramic acid 6-phosphate etherase compare
SMa1136 +0.5 0.9 hypothetical protein compare
SM_b21698 +0.5 1.5 hypothetical protein compare
SM_b20618 +0.5 2.3 thiamine-phosphate pyrophosphorylase compare
SMa0125 +0.5 1.6 co-chaperonin GroES compare
SMc03972 +0.5 2.9 multidrug efflux system transmembrane protein compare
SMc04194 +0.5 2.1 transmembrane protein compare
SMc00505 +0.5 1.1 hypothetical protein compare
SM_b20292 +0.5 2.1 immunogenic protein compare
SMc02827 +0.5 1.6 hypothetical protein compare
SMc02886 +0.5 1.1 signal peptide protein compare
SM_b20261 +0.5 1.4 malate dehydrogenase compare
SMc01203 +0.5 2.5 hypothetical protein compare
SMc00150 +0.5 4.2 hypothetical protein compare
SMc02550 +0.5 1.2 hypothetical protein compare
SM_b21169 +0.5 3.2 ArsR family transcriptional regulator compare
SMc00805 +0.5 1.6 hypothetical protein compare
SM_b20786 +0.5 2.4 branched-chain amino acid ABC transporter permease compare
SMc04361 +0.5 1.4 hydantoin racemase compare
SMc04333 +0.5 2.8 hypothetical protein compare
SMc03950 +0.5 2.4 proton-translocating nicotinamide nucleotide transhydrogenase subunit protein compare
SMc01132 +0.5 1.3 hypothetical protein compare
SMc01447 +0.5 0.6 hypothetical protein compare
SMc00099 +0.5 0.7 alkylphosphonate uptake protein compare
SMc04242 +0.5 0.8 zinc uptake regulation protein compare
SMc03004 +0.5 2.0 chemoreceptor (methyl-accepting chemotaxis protein) compare
SMc01187 +0.5 1.0 rare lipoprotein A compare
SM_b21485 +0.5 1.5 hypothetical protein compare
SMc00044 +0.5 2.4 amino acid efflux protein compare
SMa1141 +0.5 2.6 FNR/CRP family transcriptional regulator compare
SMc02835 +0.5 2.6 glucokinase compare
SMa0955 +0.5 0.6 GntR family transcriptional regulator compare
SMc00827 +0.5 3.4 transport transmembrane protein compare
SMa0189 +0.5 2.8 hypothetical protein compare
SMc01131 +0.5 1.3 hypothetical protein compare
SM_b21212 +0.5 1.6 hypothetical protein compare
SMa0647 +0.5 1.2 hypothetical protein compare
SMc02582 +0.5 1.4 hypothetical protein compare
SMc00665 +0.5 1.1 hypothetical protein compare
SMa0113 +0.5 4.1 Sensor histidine kinase compare
SM_b21007 +0.5 1.8 hypothetical protein compare
SMc04230 +0.5 2.4 transmembrane signal peptide protein compare
SMc01116 +0.5 2.2 acyltransferase transmembrane protein compare
SMc02647 +0.5 1.0 transcriptional regulator compare
SMc00881 +0.5 2.7 2-dehydro-3-deoxygalactonokinase compare
SMc01769 +0.5 3.9 hypothetical protein compare
SMa0349 +0.5 1.1 hypothetical protein compare
SMc00390 +0.5 2.3 hypothetical protein compare
SMa0489 +0.5 1.9 ABC transporter ATP-binding protein compare
SMc03900 +0.5 3.9 cyclic beta-1,2-glucan ABc transporter compare
SMc03961 +0.4 2.8 sulfolipid (UDP-sulfoquinovose) biosynthesis protein compare
SMc01007 +0.4 0.8 hypothetical protein compare
SMc01518 +0.4 1.1 hypothetical protein compare
SMc03844 +0.4 1.3 hypothetical protein compare
SMc01454 +0.4 3.3 hypothetical protein compare
SMc04382 +0.4 4.2 beta-(1,2)-glucan production associated transmembrane protein compare
SMc04343 +0.4 2.0 adenylate/guanylate cyclase transmembrane protein compare
SM_b20887 +0.4 2.5 hypothetical protein compare


Specific Phenotypes

For 12 genes in this experiment

For carbon source Protocatechuic Acid in Sinorhizobium meliloti 1021

For carbon source Protocatechuic Acid across organisms