Experiment set9IT079 for Sinorhizobium meliloti 1021

Compare to:

pipercolic acid carbon source

200 most important genes:

  gene name fitness t score description  
SMc01843 -7.0 -9.5 5,10-methylenetetrahydrofolate reductase compare
SMc00235 -6.9 -6.7 anthranilate phosphoribosyltransferase compare
SMc02766 -6.5 -19.3 tryptophan synthase subunit beta compare
SMc00640 -6.5 -4.5 phosphoserine aminotransferase compare
SMc01494 -6.5 -14.6 phosphoserine phosphatase compare
SMc02899 -6.5 -10.9 prephenate dehydratase compare
SMc04405 -6.3 -10.5 3-isopropylmalate dehydrogenase compare
SMc02767 -6.2 -10.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01028 -6.2 -11.9 phosphopyruvate hydratase compare
SMc02725 -6.1 -11.0 anthranilate synthase compare
SMc00236 -6.1 -6.0 Indole-3-glycerol phosphate synthase compare
SMc01054 -6.1 -5.2 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00918 -6.0 -8.2 ATP phosphoribosyltransferase regulatory subunit compare
SMc00494 -6.0 -2.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02717 -5.9 -13.2 2-isopropylmalate synthase compare
SMc01801 -5.9 -4.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc04045 -5.9 -9.0 dihydroxy-acid dehydratase compare
SMc02765 -5.9 -12.0 tryptophan synthase subunit alpha compare
SMc02569 -5.9 -5.7 imidazole glycerol phosphate synthase subunit HisF compare
SMc00917 -5.8 -5.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc03112 -5.8 -16.2 B12-dependent methionine synthase compare
SMc00493 -5.7 -6.8 phosphoribosylformylglycinamidine synthase I compare
SMc02217 -5.7 -5.5 O-succinylhomoserine sulfhydrylase compare
SMc00131 -5.7 -16.4 transcriptional regulator compare
SMc02838 -5.6 -5.9 phosphoglyceromutase compare
SM_b21181 -5.6 -9.4 glutaryl-CoA dehydrogenase compare
SMc04002 -5.6 -9.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02562 -5.6 -7.6 phosphoenolpyruvate carboxykinase compare
SMc00092 -5.4 -12.5 phosphoadenosine phosphosulfate reductase compare
SMc01431 -5.4 -13.9 acetolactate synthase 3 catalytic subunit compare
SMc01576 -5.2 -11.7 oxidoreductase compare
SMc03974 -5.2 -7.1 hypothetical protein compare
SMc03823 -5.2 -9.4 isopropylmalate isomerase large subunit compare
SMc03979 -5.1 -3.5 glyceraldehyde-3-phosphate dehydrogenase compare
SM_b21182 -5.1 -9.8 hypothetical protein compare
SMc01004 -5.1 -9.2 phosphoribosyl-AMP cyclohydrolase compare
SMc03797 -5.1 -11.8 homoserine O-succinyltransferase compare
SMc00488 -5.1 -17.5 phosphoribosylformylglycinamidine synthase II compare
SMc02123 -5.0 -4.9 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00293 -5.0 -13.6 homoserine dehydrogenase compare
SMc04385 -4.9 -6.8 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc01726 -4.9 -7.4 acetylglutamate kinase compare
SMc03981 -4.9 -5.7 phosphoglycerate kinase compare
SMc00615 -4.9 -8.3 phosphoribosylaminoimidazole synthetase compare
SMc00993 -4.9 -12.5 phosphoribosylamine--glycine ligase compare
SMc02048 -4.9 -10.2 glycine cleavage system protein H compare
SMa1635 -4.9 -2.7 hypothetical protein compare
SMc02124 -4.8 -15.4 nitrite reductase compare
SMc02047 -4.8 -8.9 glycine cleavage system aminomethyltransferase T compare
SMc00768 -4.8 -11.9 isocitrate lyase compare
SMc00711 -4.8 -5.6 cyclohexadienyl dehydrogenase compare
SMc00495 -4.7 -7.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc04088 -4.7 -10.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SM_b20197 -4.7 -8.4 ribulose-1,5-bisphosphate carboxylase small subunit (EC 4.1.1.39) (from data) compare
SMc00025 -4.6 -8.8 pyruvate phosphate dikinase compare
SMc00554 -4.6 -8.2 amidophosphoribosyltransferase compare
SMc00090 -4.4 -8.2 sulfate adenylyltransferase compare
SMc02245 -4.4 -6.7 dihydroorotate dehydrogenase 2 compare
SMc04085 -4.4 -3.0 hypothetical protein compare
SMc02572 -4.4 -3.9 imidazole glycerol phosphate synthase subunit HisH compare
SMc02755 -4.2 -5.0 S-adenosyl-L-homocysteine hydrolase compare
SM_b20258 -4.2 -4.1 transcriptional regulator compare
SMc02049 -4.2 -20.0 glycine dehydrogenase compare
SMc00091 -4.1 -13.5 sulfate adenylyltransferase compare
SMc00614 -4.1 -8.6 phosphoribosylglycinamide formyltransferase compare
SMc00412 -4.0 -5.4 orotidine 5'-phosphate decarboxylase compare
SMc04346 -4.0 -7.3 ketol-acid reductoisomerase compare
SM_b20196 -3.9 -14.1 CbbX protein compare
SMc02165 -3.9 -7.0 orotate phosphoribosyltransferase compare
SMc03795 -3.9 -2.1 isopropylmalate isomerase small subunit compare
SM_b20198 -3.7 -14.7 ribulose bisophosphate carboxylase compare
SMc02138 -3.7 -5.8 acetylornithine transaminase compare
SMc04882 -3.7 -5.0 transcriptional regulator compare
SMc01430 -3.7 -7.7 acetolactate synthase 3 regulatory subunit compare
SMc02307 -3.7 -7.8 histidinol dehydrogenase compare
SMc00514 -3.7 -5.5 monooxygenase compare
SMc03777 -3.6 -7.1 gamma-glutamyl phosphate reductase compare
SMc02166 -3.6 -9.8 dihydroorotase compare
SMc02570 -3.6 -4.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00017 -3.5 -1.8 homoserine kinase compare
SMc04384 -3.5 -9.9 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc02172 -3.5 -10.6 transcriptional regulator compare
SMc01360 -3.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc00769 -3.5 -12.8 hypothetical protein compare
SMc01120 -3.5 -4.1 hypothetical protein compare
SMc03776 -3.5 -4.7 gamma-glutamyl kinase compare
SMc00982 -3.4 -6.1 dioxygenase compare
SM_b20200 -3.4 -14.2 transketolase compare
SMc00641 -3.4 -5.9 D-3-phosphoglycerate dehydrogenase compare
SMc02707 -3.4 -3.9 hypothetical protein compare
SMc01053 -3.3 -5.7 siroheme synthase compare
SMc02234 -3.2 -2.2 hypothetical protein compare
SMc02246 -3.2 -1.2 hypothetical protein compare
SMc01206 -3.2 -1.6 queuine tRNA-ribosyltransferase compare
SMc03879 -3.1 -8.2 Acetyl-CoA acetyltransferase (EC 2.3.1.9) (from data) compare
SMc01770 -3.1 -2.2 serine hydroxymethyltransferase compare
SMc01951 -3.1 -7.7 high-affinity branched-chain amino acid ABC transporter permease compare
SMc02640 -3.0 -5.3 UDP-glucuronic acid epimerase compare
SMc00726 -3.0 -1.2 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc03069 -2.9 -3.1 6-phosphogluconolactonase compare
SMc01950 -2.8 -14.4 high-affinity branched-chain amino acid ABC transporter permease compare
SMc02112 -2.8 -7.3 hypothetical protein compare
SM_b21177 -2.7 -9.6 phosphate uptake ABC transporter ATP-binding protein compare
SMc01842 -2.7 -3.1 methyltransferase transcription regulator protein compare
SMa0789 -2.6 -3.5 GntR family transcriptional regulator compare
SMc02778 -2.6 -2.0 hydroxyacid aldolase compare
SMc00296 -2.6 -10.8 POLY3-hydroxybutyrate polymerase compare
SMc00414 -2.6 -11.5 hypothetical protein compare
SMc01949 -2.6 -6.1 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SMc02858 -2.6 -1.0 chaperone protein DnaJ compare
SMc01881 -2.6 -3.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc04383 -2.5 -4.2 putative hydrolase, required for lysine catabolism (from data) compare
SMc01948 -2.5 -4.1 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SMc02308 -2.4 -2.6 hypothetical protein compare
SM_b21176 -2.4 -6.3 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc04001 -2.4 -1.6 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc04386 -2.4 -5.4 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) (from data) compare
SMc00294 -2.4 -9.7 aminotransferase compare
SMc01361 -2.4 -2.3 dihydroorotase compare
SMc03878 -2.4 -2.5 acetoacetyl-CoA reductase compare
SMc01505 -2.3 -2.1 hypothetical protein compare
SMc00321 -2.3 -6.5 tRNA pseudouridine synthase B compare
SMc00981 -2.2 -7.3 ferredoxin protein compare
SMa2020 -2.2 -6.5 Transcriptional regulator compare
SMc02280 -2.2 -2.1 hypothetical protein compare
SMc01880 -2.1 -1.4 pantoate--beta-alanine ligase compare
SM_b20953 -2.1 -1.6 hypothetical protein compare
SMc02137 -2.1 -2.3 ornithine carbamoyltransferase compare
SMc02115 -2.1 -0.8 hypothetical protein compare
SMc03978 -2.1 -1.4 transketolase compare
SMc02058 -2.1 -4.5 YAJC protein compare
SMc00876 -2.0 -4.0 ATP-binding MRP protein compare
SMc01220 -2.0 -3.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02379 -2.0 -7.6 permease compare
SMc02641 -2.0 -2.2 UDP-glucose 6-dehydrogenase compare
SMc00302 -1.9 -1.7 hypothetical protein compare
SMc00151 -1.9 -7.4 phosphoglycolate phosphatase compare
SM_b20199 -1.9 -7.6 fructose-1,6-bisphosphate aldolase compare
SMc00010 -1.8 -1.2 cytochrome C oxidase polypeptide I transmembrane protein compare
SM_b20509 -1.8 -2.6 transcriptional regulator compare
SMc02724 -1.8 -2.9 hypothetical protein compare
SMc01207 -1.8 -1.8 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc03100 -1.8 -1.5 hypothetical protein compare
SMc01124 -1.7 -5.5 PII uridylyl-transferase compare
SM_b21174 -1.7 -5.3 phosphate uptake ABC transporter permease compare
SMc04439 -1.7 -6.0 glycine betaine transport ATP-binding ABC transporter protein compare
SMc02850 -1.6 -1.5 DNA polymerase I compare
SMa1442 -1.6 -5.7 GntR family transcriptional regulator compare
SMc01947 -1.6 -3.3 hypothetical protein compare
SMc02435 -1.6 -1.1 methyltransferase compare
SMc02975 -1.6 -5.3 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SMc00914 -1.6 -2.1 oxidoreductase compare
SMc00987 -1.6 -2.2 hypothetical protein compare
SMc01108 -1.6 -6.2 tRNA (guanine-N(7)-)-methyltransferase compare
SMc01579 -1.5 -1.7 hypothetical protein compare
SMc00450 -1.5 -1.4 protoheme IX farnesyltransferase compare
SM_b21175 -1.5 -4.6 phosphate uptake ABC transporter permease compare
SM_b20148 -1.5 -3.5 transcriptional regulator compare
SMc02581 -1.5 -8.6 malate synthase G compare
SMc00404 -1.5 -1.3 hypothetical protein compare
SMc00013 -1.4 -1.3 cytochrome C oxidase subunit III transmembrane protein compare
SM_b20307 -1.4 -1.3 dihydroxyacetone kinase compare
SMc01368 -1.4 -5.1 transport transmembrane protein compare
SMa2215 -1.4 -3.2 GntR family transcriptional regulator compare
SMc04260 -1.4 -8.4 transcriptional regulator compare
SMc00295 -1.4 -1.1 hypothetical protein compare
SMc01164 -1.4 -6.8 hypothetical protein compare
SMc00034 -1.3 -5.5 oxidoreductase compare
SMc02685 -1.3 -2.2 hypothetical protein compare
SM_b20320 -1.3 -2.0 TRAP-type large permease component compare
SMc02378 -1.3 -5.9 periplasmic binding transmembrane protein compare
SM_b21132 -1.3 -3.7 sulfate ABC transporter permease compare
SMc01439 -1.3 -3.0 hypothetical protein compare
SMc03763 -1.3 -0.9 cytosine-specific methyltransferase compare
SMc01501 -1.3 -2.6 mannitol 2-dehydrogenase compare
SMc02460 -1.3 -7.3 hypothetical protein compare
SMc00566 -1.3 -2.2 hypothetical protein compare
SMc00838 -1.3 -5.0 hypothetical protein compare
SMc04093 -1.3 -9.3 acetyl-CoA synthetase compare
SMc04404 -1.3 -1.6 amino acid efflux transmembrane protein compare
SMc02425 -1.2 -2.9 transcriptional regulator compare
SMc02121 -1.2 -1.3 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SM_b20294 -1.2 -1.1 transcriptional regulator NanR compare
SMc03229 -1.2 -1.5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc03850 -1.2 -0.6 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b20392 -1.2 -4.2 transcriptional regulator NanR compare
SMc01454 -1.2 -6.6 hypothetical protein compare
SMc00419 -1.2 -1.1 glutathione synthetase compare
SMc01440 -1.2 -3.2 hydrolase serine protease transmembrane protein compare
SMc00565 -1.2 -1.4 50S ribosomal protein L9 compare
SMc02253 -1.2 -4.2 salicylate biosynthesis protein compare
SMc00622 -1.2 -4.9 ribonuclease D protein compare
SM_b21598 -1.2 -4.4 transcriptional regulator compare
SMc02476 -1.1 -2.7 hypothetical protein compare
SMc00815 -1.1 -0.7 inosine 5'-monophosphate dehydrogenase compare
SMc00513 -1.1 -4.7 amino acid-binding periplasmic protein compare
SMc02659 -1.1 -1.7 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc02434 -1.1 -2.2 hypothetical protein compare
SMc04000 -1.1 -0.9 hypothetical protein compare
SMc02753 -1.1 -0.7 PTS system transporter subunit IIA compare


Specific Phenotypes

For 20 genes in this experiment

For carbon source L-Pipecolic Acid in Sinorhizobium meliloti 1021

For carbon source L-Pipecolic Acid across organisms