Experiment set9IT078 for Sinorhizobium meliloti 1021

Compare to:

pipercolic acid carbon source

200 most important genes:

  gene name fitness t score description  
SMc02838 -8.5 -5.9 phosphoglyceromutase compare
SMc01494 -7.4 -11.3 phosphoserine phosphatase compare
SMc00131 -7.3 -8.7 transcriptional regulator compare
SMc01054 -7.1 -4.9 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc03981 -7.0 -4.8 phosphoglycerate kinase compare
SMc04882 -6.9 -5.9 transcriptional regulator compare
SMc00917 -6.9 -4.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02569 -6.9 -4.7 imidazole glycerol phosphate synthase subunit HisF compare
SMc02899 -6.8 -10.4 prephenate dehydratase compare
SMc01843 -6.6 -10.2 5,10-methylenetetrahydrofolate reductase compare
SMc00614 -6.6 -6.4 phosphoribosylglycinamide formyltransferase compare
SMc02766 -6.6 -19.5 tryptophan synthase subunit beta compare
SMc01576 -6.5 -6.4 oxidoreductase compare
SMc00493 -6.5 -4.5 phosphoribosylformylglycinamidine synthase I compare
SMc04405 -6.4 -9.8 3-isopropylmalate dehydrogenase compare
SMc01028 -6.4 -11.5 phosphopyruvate hydratase compare
SMc00711 -6.4 -4.4 cyclohexadienyl dehydrogenase compare
SMc01004 -6.3 -10.6 phosphoribosyl-AMP cyclohydrolase compare
SMa1635 -6.3 -2.5 hypothetical protein compare
SMc02717 -6.3 -11.3 2-isopropylmalate synthase compare
SMc04385 -6.3 -4.3 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc00235 -6.2 -7.4 anthranilate phosphoribosyltransferase compare
SM_b21181 -6.2 -7.4 glutaryl-CoA dehydrogenase compare
SMc04045 -6.2 -8.5 dihydroxy-acid dehydratase compare
SMc00615 -6.2 -9.5 phosphoribosylaminoimidazole synthetase compare
SMc02123 -6.1 -4.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00918 -6.1 -8.4 ATP phosphoribosyltransferase regulatory subunit compare
SMc00495 -6.0 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00640 -6.0 -7.1 phosphoserine aminotransferase compare
SMc02767 -6.0 -10.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01801 -5.9 -3.9 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02047 -5.9 -6.5 glycine cleavage system aminomethyltransferase T compare
SMc04002 -5.9 -9.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc03112 -5.8 -16.9 B12-dependent methionine synthase compare
SMc00236 -5.8 -5.8 Indole-3-glycerol phosphate synthase compare
SMc03974 -5.7 -5.6 hypothetical protein compare
SMc03823 -5.7 -12.4 isopropylmalate isomerase large subunit compare
SMc01431 -5.7 -12.1 acetolactate synthase 3 catalytic subunit compare
SMc04088 -5.6 -12.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02765 -5.6 -12.1 tryptophan synthase subunit alpha compare
SMc02124 -5.5 -13.2 nitrite reductase compare
SMc00768 -5.4 -10.4 isocitrate lyase compare
SMc00092 -5.4 -12.1 phosphoadenosine phosphosulfate reductase compare
SMc00488 -5.4 -17.6 phosphoribosylformylglycinamidine synthase II compare
SMc00993 -5.4 -11.9 phosphoribosylamine--glycine ligase compare
SM_b20197 -5.3 -6.3 ribulose-1,5-bisphosphate carboxylase small subunit (EC 4.1.1.39) (from data) compare
SMc02725 -5.3 -14.0 anthranilate synthase compare
SMc02137 -5.2 -3.6 ornithine carbamoyltransferase compare
SMc00091 -5.2 -12.1 sulfate adenylyltransferase compare
SMc02048 -5.2 -6.0 glycine cleavage system protein H compare
SMc03979 -5.1 -3.5 glyceraldehyde-3-phosphate dehydrogenase compare
SMc03797 -5.0 -10.7 homoserine O-succinyltransferase compare
SMc00554 -5.0 -5.9 amidophosphoribosyltransferase compare
SMc00025 -5.0 -8.3 pyruvate phosphate dikinase compare
SMc00769 -5.0 -10.1 hypothetical protein compare
SMc02570 -4.9 -7.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SM_b21182 -4.9 -10.5 hypothetical protein compare
SMc00293 -4.9 -10.7 homoserine dehydrogenase compare
SMc02049 -4.9 -18.8 glycine dehydrogenase compare
SMc02217 -4.8 -8.0 O-succinylhomoserine sulfhydrylase compare
SMc02165 -4.7 -4.6 orotate phosphoribosyltransferase compare
SMc02562 -4.7 -9.5 phosphoenolpyruvate carboxykinase compare
SMc03777 -4.7 -7.8 gamma-glutamyl phosphate reductase compare
SMc04001 -4.5 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02707 -4.5 -5.7 hypothetical protein compare
SMc00090 -4.5 -12.3 sulfate adenylyltransferase compare
SMc03229 -4.5 -3.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc01726 -4.4 -7.9 acetylglutamate kinase compare
SMc04085 -4.4 -3.0 hypothetical protein compare
SMc01430 -4.4 -4.2 acetolactate synthase 3 regulatory subunit compare
SM_b20198 -4.4 -10.9 ribulose bisophosphate carboxylase compare
SMc02572 -4.4 -3.8 imidazole glycerol phosphate synthase subunit HisH compare
SMc02755 -4.3 -4.2 S-adenosyl-L-homocysteine hydrolase compare
SMc02138 -4.3 -9.4 acetylornithine transaminase compare
SMc02640 -4.2 -2.9 UDP-glucuronic acid epimerase compare
SMc02245 -4.2 -6.9 dihydroorotate dehydrogenase 2 compare
SMc00412 -4.1 -5.0 orotidine 5'-phosphate decarboxylase compare
SMc04384 -3.9 -9.7 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc00982 -3.9 -5.3 dioxygenase compare
SMc00494 -3.9 -2.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03795 -3.9 -2.1 isopropylmalate isomerase small subunit compare
SMc02166 -3.8 -9.2 dihydroorotase compare
SMc01053 -3.8 -4.8 siroheme synthase compare
SM_b20196 -3.8 -9.8 CbbX protein compare
SMc02307 -3.7 -7.9 histidinol dehydrogenase compare
SMc01948 -3.7 -6.6 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SMc04383 -3.6 -6.0 putative hydrolase, required for lysine catabolism (from data) compare
SM_b21174 -3.6 -5.2 phosphate uptake ABC transporter permease compare
SMc00017 -3.5 -1.8 homoserine kinase compare
SMc02172 -3.5 -11.9 transcriptional regulator compare
SMc03776 -3.4 -4.7 gamma-glutamyl kinase compare
SMc00514 -3.4 -5.1 monooxygenase compare
SMc04346 -3.4 -4.7 ketol-acid reductoisomerase compare
SMc01120 -3.4 -4.0 hypothetical protein compare
SMc04386 -3.3 -6.2 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) (from data) compare
SMc00641 -3.2 -5.6 D-3-phosphoglycerate dehydrogenase compare
SMc02753 -3.2 -1.2 PTS system transporter subunit IIA compare
SM_b20200 -3.2 -10.1 transketolase compare
SMc02246 -3.2 -1.2 hypothetical protein compare
SMc01770 -3.1 -2.1 serine hydroxymethyltransferase compare
SMc01951 -3.1 -8.1 high-affinity branched-chain amino acid ABC transporter permease compare
SMc01881 -3.1 -2.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01949 -3.0 -7.1 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SM_b20258 -3.0 -3.6 transcriptional regulator compare
SMc02308 -3.0 -2.9 hypothetical protein compare
SMc00726 -3.0 -1.1 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc00414 -3.0 -13.5 hypothetical protein compare
SMc03879 -2.9 -5.5 Acetyl-CoA acetyltransferase (EC 2.3.1.9) (from data) compare
SMc01950 -2.9 -14.7 high-affinity branched-chain amino acid ABC transporter permease compare
SMc00981 -2.9 -6.8 ferredoxin protein compare
SMc00296 -2.9 -11.1 POLY3-hydroxybutyrate polymerase compare
SM_b20199 -2.8 -7.9 fructose-1,6-bisphosphate aldolase compare
SMc00294 -2.8 -8.6 aminotransferase compare
SMc00295 -2.8 -1.4 hypothetical protein compare
SMc02112 -2.7 -5.3 hypothetical protein compare
SMc00321 -2.6 -6.7 tRNA pseudouridine synthase B compare
SMc02234 -2.6 -2.5 hypothetical protein compare
SMc02055 -2.6 -2.5 phytoene synthase compare
SMc02425 -2.5 -4.0 transcriptional regulator compare
SM_b21175 -2.4 -5.7 phosphate uptake ABC transporter permease compare
SMc00876 -2.4 -3.2 ATP-binding MRP protein compare
SMc01360 -2.3 -2.6 aspartate carbamoyltransferase catalytic subunit compare
SM_b21177 -2.3 -7.7 phosphate uptake ABC transporter ATP-binding protein compare
SMc02724 -2.3 -2.8 hypothetical protein compare
SMc02641 -2.3 -2.2 UDP-glucose 6-dehydrogenase compare
SMc02253 -2.3 -6.1 salicylate biosynthesis protein compare
SMa0789 -2.3 -3.3 GntR family transcriptional regulator compare
SMc02812 -2.2 -4.1 hypothetical protein compare
SMc02505 -2.2 -1.0 hypothetical protein compare
SM_b20509 -2.2 -3.4 transcriptional regulator compare
SMc01880 -2.1 -1.4 pantoate--beta-alanine ligase compare
SMc03069 -2.1 -2.0 6-phosphogluconolactonase compare
SMc01206 -2.1 -1.2 queuine tRNA-ribosyltransferase compare
SMc00619 -2.1 -1.4 hypothetical protein compare
SMa2020 -2.1 -4.6 Transcriptional regulator compare
SMc02521 -2.1 -4.0 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc02232 -2.1 -2.5 hypothetical protein compare
SMc02379 -2.1 -9.4 permease compare
SMc01124 -2.1 -7.8 PII uridylyl-transferase compare
SMc01947 -2.0 -5.8 hypothetical protein compare
SMc01505 -2.0 -2.1 hypothetical protein compare
SMc00450 -2.0 -1.3 protoheme IX farnesyltransferase compare
SMc01368 -2.0 -5.6 transport transmembrane protein compare
SMc01220 -2.0 -4.6 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01315 -1.9 -1.6 hypothetical protein compare
SMc01495 -1.9 -3.4 transcriptional regulator compare
SMc02058 -1.9 -3.7 YAJC protein compare
SMc02850 -1.9 -1.3 DNA polymerase I compare
SMc02683 -1.9 -2.5 hypothetical protein compare
SMc00151 -1.9 -6.6 phosphoglycolate phosphatase compare
SMc00580 -1.9 -2.4 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc03978 -1.8 -2.1 transketolase compare
SMc02975 -1.8 -6.8 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SM_b21176 -1.8 -4.6 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00013 -1.8 -1.6 cytochrome C oxidase subunit III transmembrane protein compare
SMc01361 -1.8 -2.8 dihydroorotase compare
SMc02844 -1.8 -1.8 transcriptional regulator compare
SMc01439 -1.7 -3.4 hypothetical protein compare
SMc04439 -1.7 -6.7 glycine betaine transport ATP-binding ABC transporter protein compare
SMc01800 -1.6 -0.8 cytochrome C oxidase assembly transmembrane protein compare
SMc01164 -1.6 -7.6 hypothetical protein compare
SMc01939 -1.6 -1.4 urease subunit beta compare
SM_b20773 -1.6 -4.0 GntR family transcriptional regulator compare
SMc00492 -1.6 -0.8 hypothetical protein compare
SMc01108 -1.6 -7.0 tRNA (guanine-N(7)-)-methyltransferase compare
SMa1442 -1.6 -4.6 GntR family transcriptional regulator compare
SMc02581 -1.5 -7.6 malate synthase G compare
SMc04260 -1.5 -7.8 transcriptional regulator compare
SM_b20261 -1.5 -3.8 malate dehydrogenase compare
SMc01440 -1.5 -6.3 hydrolase serine protease transmembrane protein compare
SM_b21598 -1.5 -6.6 transcriptional regulator compare
SMc03993 -1.5 -3.8 hypothetical protein compare
SMc02909 -1.5 -1.7 transglycosylase transmembrane protein compare
SMc02460 -1.5 -6.5 hypothetical protein compare
SMc02280 -1.5 -1.9 hypothetical protein compare
SMc00034 -1.5 -6.4 oxidoreductase compare
SMc01842 -1.4 -1.6 methyltransferase transcription regulator protein compare
SMc00760 -1.4 -3.6 recombinase A compare
SM_b21132 -1.4 -3.7 sulfate ABC transporter permease compare
SMc02164 -1.4 -3.0 fructokinase compare
SMc01454 -1.4 -6.6 hypothetical protein compare
SMc02141 -1.4 -0.9 phosphate transporter PhoU compare
SMc01877 -1.4 -5.1 DNA repair protein compare
SMc02778 -1.4 -1.6 hydroxyacid aldolase compare
SM_b21131 -1.3 -6.2 sulfate ABC transporter permease compare
SMc02121 -1.3 -1.6 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SM_b21374 -1.3 -3.8 tagatose kinase (EC 2.7.1.101) (from data) compare
SM_b20624 -1.3 -5.5 methylthioribose-1-phosphate isomerase compare
SMc02690 -1.3 -3.1 hypothetical protein compare
SMc00838 -1.3 -5.6 hypothetical protein compare
SMc02145 -1.3 -0.7 signal peptide protein compare
SMc03763 -1.3 -0.9 cytosine-specific methyltransferase compare
SMc00622 -1.3 -5.4 ribonuclease D protein compare
SMc04391 -1.3 -1.7 3-ketoacyl-ACP reductase compare
SMc04093 -1.3 -10.0 acetyl-CoA synthetase compare
SMc00337 -1.3 -1.7 hypothetical protein compare
SMc00302 -1.3 -1.3 hypothetical protein compare
SMc03100 -1.3 -1.1 hypothetical protein compare
SMc01207 -1.3 -1.9 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01441 -1.2 -3.5 membrane bound protease compare


Specific Phenotypes

For 27 genes in this experiment

For carbon source L-Pipecolic Acid in Sinorhizobium meliloti 1021

For carbon source L-Pipecolic Acid across organisms