Experiment set9IT078 for Ralstonia sp. UNC404CL21Col

Compare to:

Azelaic acid carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS16080 -6.7 -2.9 P-II family nitrogen regulator compare
ABZR87_RS00195 -6.6 -4.6 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS02155 -6.4 -4.4 anthranilate phosphoribosyltransferase compare
ABZR87_RS14950 -6.2 -3.5 acetolactate synthase small subunit compare
ABZR87_RS20875 -6.2 -4.3 LysR family transcriptional regulator compare
ABZR87_RS09450 -6.2 -4.3 prephenate dehydratase compare
ABZR87_RS13250 -6.1 -3.0 phosphoserine phosphatase SerB compare
ABZR87_RS02160 -6.1 -4.2 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS14995 -6.0 -2.6 diacylglycerol kinase compare
ABZR87_RS14540 -6.0 -4.2 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS14505 -6.0 -4.1 phosphoribosylanthranilate isomerase compare
ABZR87_RS01110 -5.9 -4.1 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS07360 -5.9 -12.1 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS02640 -5.9 -13.2 diaminopimelate decarboxylase compare
ABZR87_RS14535 -5.9 -5.7 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS02140 -5.8 -11.9 anthranilate synthase component I compare
ABZR87_RS00200 -5.8 -4.0 phosphoadenylyl-sulfate reductase compare
ABZR87_RS02565 -5.8 -4.0 glutamate synthase subunit beta compare
ABZR87_RS16270 -5.7 -1.4 cold-shock protein compare
ABZR87_RS06770 -5.7 -3.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS02570 -5.5 -21.7 glutamate synthase-related protein compare
ABZR87_RS09465 -5.5 -3.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS14790 -5.4 -8.2 acyl-CoA dehydrogenase compare
ABZR87_RS11625 -5.3 -10.9 malate synthase A compare
ABZR87_RS08630 -5.3 -7.3 dihydroorotase compare
ABZR87_RS10120 -5.3 -2.3 YceD family protein compare
ABZR87_RS16170 -5.1 -3.5 argininosuccinate lyase compare
ABZR87_RS14490 -5.1 -8.5 tryptophan synthase subunit alpha compare
ABZR87_RS13790 -5.1 -8.5 chorismate synthase compare
ABZR87_RS04785 -5.1 -9.2 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS23095 -5.0 -1.3 MarR family transcriptional regulator compare
ABZR87_RS14500 -5.0 -14.3 tryptophan synthase subunit beta compare
ABZR87_RS05200 -4.9 -15.7 homoserine O-acetyltransferase compare
ABZR87_RS12585 -4.9 -10.5 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein compare
ABZR87_RS20880 -4.9 -9.4 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS10820 -4.9 -6.6 LysR substrate-binding domain-containing protein compare
ABZR87_RS02145 -4.8 -2.4 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS02590 -4.8 -9.2 3-dehydroquinate synthase compare
ABZR87_RS13290 -4.7 -3.6 3-ketoacyl-ACP reductase compare
ABZR87_RS09200 -4.7 -17.2 long-chain fatty acid--CoA ligase compare
ABZR87_RS11940 -4.7 -3.2 SsrA-binding protein SmpB compare
ABZR87_RS04975 -4.7 -3.1 peptide deformylase compare
ABZR87_RS14530 -4.7 -9.9 3-isopropylmalate dehydrogenase compare
ABZR87_RS00190 -4.7 -12.0 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS09445 -4.7 -15.1 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS00205 -4.7 -4.0 DUF934 domain-containing protein compare
ABZR87_RS14800 -4.7 -3.5 DUF1178 family protein compare
ABZR87_RS00210 -4.6 -9.6 nitrite/sulfite reductase compare
ABZR87_RS11015 -4.6 -8.0 amino-acid N-acetyltransferase compare
ABZR87_RS09100 -4.6 -10.4 acyl-CoA dehydrogenase compare
ABZR87_RS00355 -4.5 -10.1 quinolinate synthase NadA compare
ABZR87_RS00835 -4.4 -3.1 argininosuccinate synthase compare
ABZR87_RS05130 -4.4 -1.1 CsbD family protein compare
ABZR87_RS02595 -4.4 -8.0 shikimate kinase compare
ABZR87_RS13415 -4.4 -3.0 IclR family transcriptional regulator compare
ABZR87_RS01760 -4.4 -1.1 PP0621 family protein compare
ABZR87_RS16660 -4.4 -4.3 helix-turn-helix domain-containing protein compare
ABZR87_RS00185 -4.3 -3.0 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS22340 -4.3 -1.5 hypothetical protein compare
ABZR87_RS13050 -4.3 -1.1 GpE family phage tail protein compare
ABZR87_RS07380 -4.3 -12.0 FAD/FMN-binding oxidoreductase compare
ABZR87_RS05170 -4.2 -2.9 acetylglutamate kinase compare
ABZR87_RS16180 -4.2 -2.9 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS05100 -4.2 -6.0 RNA polymerase-binding protein DksA compare
ABZR87_RS14380 -4.2 -4.9 glutamate racemase compare
ABZR87_RS17310 -4.1 -6.7 PadR family transcriptional regulator compare
ABZR87_RS22970 -4.1 -9.6 cystathionine gamma-synthase family protein compare
ABZR87_RS01615 -4.1 -1.3 RNB domain-containing ribonuclease compare
ABZR87_RS00285 -4.1 -2.8 acetylornithine transaminase compare
ABZR87_RS00220 -4.1 -9.0 CysB family HTH-type transcriptional regulator compare
ABZR87_RS10565 -4.1 -2.8 cupin domain-containing protein compare
ABZR87_RS01810 -4.0 -3.7 glutamate 5-kinase compare
ABZR87_RS14330 -4.0 -1.0 hypothetical protein compare
ABZR87_RS04865 -4.0 -2.8 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS14795 -4.0 -6.6 acyl-CoA dehydrogenase family protein compare
ABZR87_RS14115 -4.0 -3.9 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS11245 -3.9 -7.2 translational GTPase TypA compare
ABZR87_RS07625 -3.9 -3.9 Holliday junction branch migration protein RuvA compare
ABZR87_RS02380 -3.9 -15.4 cytochrome bc complex cytochrome b subunit compare
ABZR87_RS13285 -3.9 -11.2 polyhydroxyalkanoate synthesis repressor PhaR compare
ABZR87_RS18105 -3.8 -1.3 hypothetical protein compare
ABZR87_RS14955 -3.8 -6.8 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS06315 -3.8 -14.2 bifunctional isocitrate dehydrogenase kinase/phosphatase compare
ABZR87_RS04125 -3.7 -8.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS14675 -3.7 -0.9 glyoxalase compare
ABZR87_RS11760 -3.6 -0.9 membrane protein compare
ABZR87_RS05305 -3.6 -9.9 TetR family transcriptional regulator compare
ABZR87_RS02575 -3.6 -9.6 transposase compare
ABZR87_RS00435 -3.6 -8.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS11440 -3.6 -6.8 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS10610 -3.5 -1.7 inositol monophosphatase family protein compare
ABZR87_RS21815 -3.5 -0.9 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS10045 -3.5 -1.2 lactate utilization protein C compare
ABZR87_RS13300 -3.5 -10.4 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS00345 -3.5 -10.2 L-aspartate oxidase compare
ABZR87_RS01645 -3.4 -3.6 type II 3-dehydroquinate dehydratase compare
ABZR87_RS09635 -3.4 -2.0 ribosome small subunit-dependent GTPase A compare
ABZR87_RS09935 -3.3 -6.3 amino acid aminotransferase compare
ABZR87_RS16960 -3.3 -4.5 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS06645 -3.3 -2.1 TlpA disulfide reductase family protein compare
ABZR87_RS08625 -3.3 -2.2 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS10240 -3.2 -2.2 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS15405 -3.2 -2.9 YebC/PmpR family DNA-binding transcriptional regulator compare
ABZR87_RS02480 -3.2 -2.2 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS19485 -3.1 -1.5 H-NS histone family protein compare
ABZR87_RS13705 -3.1 -1.3 integration host factor subunit alpha compare
ABZR87_RS05590 -3.1 -3.0 orotate phosphoribosyltransferase compare
ABZR87_RS10620 -3.1 -3.5 serine O-acetyltransferase compare
ABZR87_RS04995 -3.1 -2.9 DNA topoisomerase III compare
ABZR87_RS01690 -3.0 -0.7 collagen-like triple helix repeat-containing protein compare
ABZR87_RS06845 -3.0 -7.9 heme o synthase compare
ABZR87_RS02445 -3.0 -4.2 Sec-independent protein translocase protein TatB compare
ABZR87_RS02440 -2.9 -9.4 twin-arginine translocase subunit TatC compare
ABZR87_RS08695 -2.9 -4.5 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS08665 -2.9 -7.2 GNAT family N-acetyltransferase compare
ABZR87_RS01675 -2.9 -2.0 carbohydrate kinase family protein compare
ABZR87_RS05350 -2.9 -6.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS12575 -2.9 -2.7 acetyl-CoA C-acyltransferase compare
ABZR87_RS07760 -2.9 -2.3 HlyC/CorC family transporter compare
ABZR87_RS08670 -2.8 -11.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
ABZR87_RS02485 -2.8 -0.7 MarC family protein compare
ABZR87_RS09615 -2.8 -1.2 50S ribosomal protein L19 compare
ABZR87_RS04245 -2.8 -9.5 OmpW family protein compare
ABZR87_RS08660 -2.8 -6.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS16125 -2.7 -4.2 heme biosynthesis protein HemY compare
ABZR87_RS05965 -2.7 -1.7 hemerythrin domain-containing protein compare
ABZR87_RS08795 -2.6 -3.7 undecaprenyl-diphosphate phosphatase compare
ABZR87_RS11735 -2.6 -1.4 chitin-binding domain-containing protein compare
ABZR87_RS12785 -2.6 -1.8 endopeptidase La compare
ABZR87_RS07050 -2.6 -1.1 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS00875 -2.6 -4.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS04295 -2.5 -4.6 HU family DNA-binding protein compare
ABZR87_RS18410 -2.5 -2.6 hypothetical protein compare
ABZR87_RS01035 -2.5 -3.0 histidine utilization repressor compare
ABZR87_RS13010 -2.5 -1.1 GPW/gp25 family protein compare
ABZR87_RS08505 -2.4 -1.7 CpaE family protein compare
ABZR87_RS08070 -2.4 -1.8 pyruvate kinase compare
ABZR87_RS09975 -2.4 -2.7 Fe-S cluster assembly transcriptional regulator IscR compare
ABZR87_RS08655 -2.4 -5.6 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS11815 -2.3 -6.5 [protein-PII] uridylyltransferase compare
ABZR87_RS17180 -2.2 -4.2 class I SAM-dependent methyltransferase compare
ABZR87_RS02235 -2.2 -4.5 response regulator compare
ABZR87_RS02020 -2.2 -6.6 long-chain fatty acid--CoA ligase compare
ABZR87_RS07620 -2.1 -3.2 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS02375 -2.1 -6.0 cytochrome c1 compare
ABZR87_RS15440 -2.1 -3.0 ribonuclease G compare
ABZR87_RS14235 -2.1 -4.9 formyltetrahydrofolate deformylase compare
ABZR87_RS01605 -2.1 -3.6 shikimate dehydrogenase compare
ABZR87_RS21795 -2.1 -3.0 NUDIX domain-containing protein compare
ABZR87_RS07635 -2.0 -2.3 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS13540 -2.0 -1.8 DUF1488 family protein compare
ABZR87_RS17115 -2.0 -2.5 phytanoyl-CoA dioxygenase family protein compare
ABZR87_RS05205 -2.0 -3.5 methionine biosynthesis protein MetW compare
ABZR87_RS22585 -2.0 -1.5 methyl-accepting chemotaxis protein compare
ABZR87_RS12795 -2.0 -4.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS00350 -2.0 -2.5 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS09710 -2.0 -2.7 tRNA-Arg compare
ABZR87_RS10930 -2.0 -1.7 outer membrane protein assembly factor BamB compare
ABZR87_RS02225 -2.0 -8.1 ATP-binding protein compare
ABZR87_RS00215 -1.9 -3.0 sulfite exporter TauE/SafE family protein compare
ABZR87_RS20665 -1.9 -2.2 IclR family transcriptional regulator compare
ABZR87_RS09460 -1.9 -2.4 prephenate dehydrogenase compare
ABZR87_RS01165 -1.9 -1.4 VOC family protein compare
ABZR87_RS11325 -1.9 -2.6 hypothetical protein compare
ABZR87_RS11390 -1.9 -6.8 PhoH family protein compare
ABZR87_RS09515 -1.8 -1.0 cysteine synthase CysM compare
ABZR87_RS11925 -1.8 -6.2 phosphoenolpyruvate synthase compare
ABZR87_RS14510 -1.8 -3.5 tRNA pseudouridine(38-40) synthase TruA compare
ABZR87_RS08680 -1.8 -5.5 glycosyltransferase compare
ABZR87_RS06745 -1.8 -5.1 S41 family peptidase compare
ABZR87_RS07675 -1.8 -4.1 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR87_RS01070 -1.8 -1.5 hypothetical protein compare
ABZR87_RS02630 -1.7 -4.2 iron donor protein CyaY compare
ABZR87_RS12790 -1.7 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS01910 -1.7 -1.8 peroxiredoxin compare
ABZR87_RS06715 -1.7 -2.0 PTS sugar transporter subunit IIA compare
ABZR87_RS13645 -1.7 -0.8 hypothetical protein compare
ABZR87_RS10980 -1.7 -0.7 tRNA-Leu compare
ABZR87_RS09075 -1.7 -3.6 DUF3318 domain-containing protein compare
ABZR87_RS18630 -1.7 -1.1 class II fumarate hydratase compare
ABZR87_RS00795 -1.6 -2.5 site-specific tyrosine recombinase XerD compare
ABZR87_RS13445 -1.6 -1.7 phasin family protein compare
ABZR87_RS11125 -1.6 -5.0 cell division protein ZapE compare
ABZR87_RS06385 -1.6 -5.1 CHASE3 domain-containing protein compare
ABZR87_RS02680 -1.6 -5.2 c-type cytochrome compare
ABZR87_RS07665 -1.6 -4.9 aminopeptidase P N-terminal domain-containing protein compare
ABZR87_RS08640 -1.6 -3.2 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABZR87_RS23250 -1.6 -1.5 hypothetical protein compare
ABZR87_RS16250 -1.5 -3.0 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS02850 -1.5 -1.7 elongation factor Tu compare
ABZR87_RS11065 -1.5 -4.0 nitrogen regulation protein NR(II) compare
ABZR87_RS04615 -1.5 -2.2 Rrf2 family transcriptional regulator compare
ABZR87_RS00970 -1.5 -0.8 molecular chaperone DnaJ compare
ABZR87_RS17315 -1.4 -2.6 MarR family transcriptional regulator compare
ABZR87_RS14575 -1.4 -2.5 GntR family transcriptional regulator compare
ABZR87_RS05990 -1.4 -2.9 AraC family transcriptional regulator compare
ABZR87_RS01685 -1.4 -3.0 histone H1-like DNA-binding protein compare
ABZR87_RS18445 -1.4 -1.9 MaoC family dehydratase compare
ABZR87_RS17650 -1.4 -3.7 TetR/AcrR family transcriptional regulator compare
ABZR87_RS04880 -1.4 -4.5 5-formyltetrahydrofolate cyclo-ligase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Azelaic acid in Ralstonia sp. UNC404CL21Col

For carbon source Azelaic acid across organisms