Experiment set9IT077 for Sinorhizobium meliloti 1021

Compare to:

L-Alanine carbon source

200 most important genes:

  gene name fitness t score description  
SMc02838 -6.5 -6.4 phosphoglyceromutase compare
SMc02569 -5.8 -5.5 imidazole glycerol phosphate synthase subunit HisF compare
SMc00235 -5.7 -9.5 anthranilate phosphoribosyltransferase compare
SMc00236 -5.5 -7.3 Indole-3-glycerol phosphate synthase compare
SMc00711 -5.3 -5.1 cyclohexadienyl dehydrogenase compare
SMc02766 -5.2 -17.1 tryptophan synthase subunit beta compare
SMc00640 -5.1 -9.2 phosphoserine aminotransferase compare
SMc00918 -5.1 -10.3 ATP phosphoribosyltransferase regulatory subunit compare
SMc00412 -5.0 -3.4 orotidine 5'-phosphate decarboxylase compare
SMc01843 -4.9 -12.4 5,10-methylenetetrahydrofolate reductase compare
SMc02717 -4.9 -16.4 2-isopropylmalate synthase compare
SMa1635 -4.8 -2.6 hypothetical protein compare
SMc01494 -4.8 -13.6 phosphoserine phosphatase compare
SMc03895 -4.8 -19.4 pyruvate carboxylase compare
SMc02725 -4.7 -13.6 anthranilate synthase compare
SMc04405 -4.7 -11.1 3-isopropylmalate dehydrogenase compare
SMc01028 -4.6 -16.1 phosphopyruvate hydratase compare
SMc01431 -4.6 -16.4 acetolactate synthase 3 catalytic subunit compare
SMc04001 -4.5 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00495 -4.5 -6.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00494 -4.5 -2.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02562 -4.4 -9.4 phosphoenolpyruvate carboxykinase compare
SMc02765 -4.3 -13.2 tryptophan synthase subunit alpha compare
SMc02767 -4.3 -12.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00131 -4.3 -16.8 transcriptional regulator compare
SMc03823 -4.3 -12.0 isopropylmalate isomerase large subunit compare
SMc03069 -4.3 -2.7 6-phosphogluconolactonase compare
SMc04026 -4.2 -9.1 glutamate synthase compare
SMc04088 -4.2 -12.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00293 -4.2 -12.4 homoserine dehydrogenase compare
SMc03112 -4.2 -14.8 B12-dependent methionine synthase compare
SMc04028 -4.1 -21.0 glutamate synthase compare
SMc02899 -4.0 -11.5 prephenate dehydratase compare
SMc00641 -4.0 -6.7 D-3-phosphoglycerate dehydrogenase compare
SMc03797 -3.9 -10.0 homoserine O-succinyltransferase compare
SMc04045 -3.9 -10.6 dihydroxy-acid dehydratase compare
SMc03795 -3.9 -2.0 isopropylmalate isomerase small subunit compare
SMc00614 -3.9 -8.9 phosphoribosylglycinamide formyltransferase compare
SMc00615 -3.8 -9.5 phosphoribosylaminoimidazole synthetase compare
SMc03981 -3.7 -4.2 phosphoglycerate kinase compare
SMc00488 -3.7 -18.9 phosphoribosylformylglycinamidine synthase II compare
SMc02137 -3.7 -4.3 ornithine carbamoyltransferase compare
SMc00993 -3.6 -12.2 phosphoribosylamine--glycine ligase compare
SMc02245 -3.6 -4.7 dihydroorotate dehydrogenase 2 compare
SMc03776 -3.6 -3.8 gamma-glutamyl kinase compare
SMc01726 -3.6 -8.6 acetylglutamate kinase compare
SMc02572 -3.6 -2.6 imidazole glycerol phosphate synthase subunit HisH compare
SMc00017 -3.5 -1.8 homoserine kinase compare
SMc01004 -3.5 -8.7 phosphoribosyl-AMP cyclohydrolase compare
SMc02121 -3.4 -1.7 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc03979 -3.4 -3.9 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02165 -3.3 -7.9 orotate phosphoribosyltransferase compare
SMc02753 -3.3 -1.2 PTS system transporter subunit IIA compare
SMc00554 -3.2 -9.4 amidophosphoribosyltransferase compare
SMc02166 -3.2 -11.0 dihydroorotase compare
SMc02246 -3.2 -1.2 hypothetical protein compare
SMc02570 -3.2 -4.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03777 -3.2 -6.1 gamma-glutamyl phosphate reductase compare
SMc02123 -3.2 -5.3 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc04002 -3.1 -5.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01770 -3.1 -2.1 serine hydroxymethyltransferase compare
SMc02707 -3.0 -6.0 hypothetical protein compare
SMc01881 -3.0 -2.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02755 -3.0 -6.5 S-adenosyl-L-homocysteine hydrolase compare
SMc02217 -2.9 -7.7 O-succinylhomoserine sulfhydrylase compare
SMc00917 -2.9 -5.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc01360 -2.9 -2.8 aspartate carbamoyltransferase catalytic subunit compare
SMc04346 -2.8 -5.6 ketol-acid reductoisomerase compare
SMc02641 -2.8 -1.9 UDP-glucose 6-dehydrogenase compare
SMc02124 -2.8 -15.1 nitrite reductase compare
SMc00092 -2.7 -12.2 phosphoadenosine phosphosulfate reductase compare
SMc02683 -2.7 -2.6 hypothetical protein compare
SMc00493 -2.7 -5.9 phosphoribosylformylglycinamidine synthase I compare
SMc00914 -2.7 -2.6 oxidoreductase compare
SMc00091 -2.5 -9.3 sulfate adenylyltransferase compare
SMc00090 -2.5 -8.6 sulfate adenylyltransferase compare
SMc01054 -2.4 -5.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00876 -2.3 -4.3 ATP-binding MRP protein compare
SMc02724 -2.3 -3.2 hypothetical protein compare
SMc03974 -2.3 -6.0 hypothetical protein compare
SMc01801 -2.3 -3.5 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00982 -2.3 -6.4 dioxygenase compare
SMc01950 -2.3 -13.2 high-affinity branched-chain amino acid ABC transporter permease conserved
SMc02975 -2.3 -9.3 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SMc02138 -2.2 -6.3 acetylornithine transaminase compare
SMc01949 -2.1 -7.3 high-affinity branched-chain amino acid ABC transporter ATP-binding protein conserved
SMc02172 -2.1 -9.3 transcriptional regulator compare
SMc01361 -2.1 -2.4 dihydroorotase compare
SMc01880 -2.1 -1.4 pantoate--beta-alanine ligase compare
SMc03978 -2.0 -1.4 transketolase compare
SMc02115 -2.0 -0.7 hypothetical protein compare
SMc02164 -2.0 -2.5 fructokinase compare
SMc02227 -1.9 -6.0 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc03229 -1.8 -2.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00010 -1.8 -1.2 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02112 -1.8 -7.4 hypothetical protein compare
SMc02308 -1.8 -4.1 hypothetical protein compare
SMc02640 -1.7 -4.3 UDP-glucuronic acid epimerase compare
SMc00414 -1.7 -9.3 hypothetical protein compare
SMc02234 -1.7 -1.9 hypothetical protein compare
SMc02118 -1.7 -7.8 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data) conserved
SMc01579 -1.6 -1.7 hypothetical protein compare
SMa2020 -1.6 -4.0 Transcriptional regulator compare
SMc01207 -1.6 -1.8 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01800 -1.6 -0.8 cytochrome C oxidase assembly transmembrane protein compare
SMc01053 -1.6 -4.0 siroheme synthase compare
SMc01858 -1.6 -1.4 S-adenosyl-methyltransferase MraW compare
SMc02435 -1.6 -1.1 methyltransferase compare
SMc01164 -1.6 -6.5 hypothetical protein compare
SM_b21598 -1.6 -4.7 transcriptional regulator compare
SMc02119 -1.5 -9.1 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 1 (from data) conserved
SMc04260 -1.5 -7.8 transcriptional regulator compare
SM_b21176 -1.5 -5.0 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc01948 -1.5 -4.5 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SMc02385 -1.5 -2.5 hypothetical protein compare
SMc04000 -1.5 -1.4 hypothetical protein compare
SMc00073 -1.5 -1.4 hypothetical protein compare
SMc02228 -1.5 -5.5 acetyl-CoA acetyltransferase compare
SMc00450 -1.5 -1.3 protoheme IX farnesyltransferase compare
SMc02266 -1.5 -2.0 hypothetical protein compare
SMc03801 -1.5 -2.7 thioredoxin protein compare
SMc01206 -1.4 -1.3 queuine tRNA-ribosyltransferase compare
SMc01495 -1.4 -4.0 transcriptional regulator compare
SMc00189 -1.4 -4.0 cytochrome C1 protein compare
SMc03070 -1.4 -5.4 glucose-6-phosphate 1-dehydrogenase compare
SM_b20509 -1.4 -2.0 transcriptional regulator compare
SMc01951 -1.4 -6.2 high-affinity branched-chain amino acid ABC transporter permease conserved
SMc01208 -1.4 -2.3 peptidyl-prolyl cis-trans isomerase B protein compare
SMa2289 -1.3 -1.5 hypothetical protein compare
SMc01845 -1.3 -1.6 transglycosylase transmembrane protein compare
SMc01169 -1.3 -7.9 alanine dehydrogenase oxidoreductase conserved
SMc02145 -1.3 -0.7 signal peptide protein compare
SMc00187 -1.3 -2.3 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00012 -1.3 -1.3 cytochrome C oxidase assembly protein compare
SMc01501 -1.3 -1.9 mannitol 2-dehydrogenase compare
SMc02844 -1.3 -1.8 transcriptional regulator compare
SMc02141 -1.3 -1.2 phosphate transporter PhoU compare
SMc02058 -1.3 -3.1 YAJC protein compare
SMa1118 -1.3 -1.7 HspC2 heat shock protein compare
SM_b21174 -1.2 -4.3 phosphate uptake ABC transporter permease compare
SM_b20897 -1.2 -1.8 hypothetical protein compare
SMc00963 -1.2 -1.7 hypothetical protein compare
SMc01947 -1.2 -2.4 hypothetical protein compare
SMc04052 -1.2 -1.5 transcriptional regulator compare
SMc02120 -1.2 -4.9 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 2 (from data) conserved
SMc01842 -1.2 -1.3 methyltransferase transcription regulator protein compare
SMc01368 -1.2 -4.6 transport transmembrane protein compare
SMc02858 -1.2 -0.6 chaperone protein DnaJ compare
SMc01220 -1.2 -2.6 lipopolysaccharide core biosynthesis glycosyl transferase compare
SM_b20312 -1.2 -5.4 dihydroxyacetone kinase compare
SMc02309 -1.2 -3.9 arsenate reductase compare
SMa0955 -1.2 -1.2 GntR family transcriptional regulator compare
SMc00815 -1.2 -0.7 inosine 5'-monophosphate dehydrogenase compare
SM_b20392 -1.1 -4.4 transcriptional regulator NanR compare
SM_b20746 -1.1 -1.2 hypothetical protein compare
SMc02451 -1.1 -1.3 hypothetical protein compare
SMc02460 -1.1 -5.4 hypothetical protein compare
SM_b21372 -1.1 -6.7 LacI family transcriptional regulator compare
SMc01505 -1.1 -1.3 hypothetical protein compare
SMc02362 -1.1 -1.2 cytochrome c-type biogenesis protein CcmE compare
SMc00072 -1.1 -1.4 peroxiredoxin protein compare
SMc00295 -1.1 -1.0 hypothetical protein compare
SMc01441 -1.1 -3.1 membrane bound protease compare
SM_b20148 -1.1 -2.9 transcriptional regulator compare
SMc02261 -1.1 -2.0 transcriptional regulator compare
SMc02425 -1.0 -2.2 transcriptional regulator compare
SMc01019 -1.0 -5.6 hypothetical protein compare
SMc04220 -1.0 -1.3 transcriptional regulator compare
SMa0846 -1.0 -1.2 transposase, fragment compare
SMc01933 -1.0 -1.2 hypothetical protein compare
SM_b20117 -1.0 -2.6 sugar transferase compare
SMa1639 -1.0 -1.3 hypothetical protein compare
SMc00791 -1.0 -1.6 hypothetical protein compare
SMc02232 -1.0 -1.7 hypothetical protein compare
SMc00356 -1.0 -3.8 lysyl-tRNA synthetase compare
SMc00355 -1.0 -2.3 hypothetical protein compare
SMc00353 -1.0 -1.2 transmembrane protein compare
SM_b21177 -1.0 -4.7 phosphate uptake ABC transporter ATP-binding protein compare
SMc00981 -1.0 -2.9 ferredoxin protein compare
SMc04174 -1.0 -1.2 signal peptide protein compare
SMc00025 -0.9 -2.9 pyruvate phosphate dikinase compare
SMc01168 -0.9 -5.3 transcriptional regulator compare
SMc02050 -0.9 -1.5 trigger factor compare
SMc02055 -0.9 -0.9 phytoene synthase compare
SMc00334 -0.9 -0.8 cytidylate kinase compare
SMc01568 -0.9 -0.9 hypothetical protein compare
SMc02685 -0.9 -1.8 hypothetical protein compare
SMa0050 -0.9 -1.3 hypothetical protein compare
SMc01522 -0.9 -1.2 hypothetical protein compare
SMc01440 -0.9 -3.3 hydrolase serine protease transmembrane protein compare
SMa0078 -0.9 -4.3 LacI family transcriptional regulator compare
SMc03763 -0.9 -1.0 cytosine-specific methyltransferase compare
SMa1201 -0.9 -2.2 hypothetical protein compare
SMc03100 -0.9 -0.8 hypothetical protein compare
SMc00565 -0.9 -1.1 50S ribosomal protein L9 compare
SMc03258 -0.9 -3.7 transcriptional regulator compare
SMc02144 -0.9 -1.6 phosphate ABC transporter permease compare
SMc01592 -0.9 -4.3 transcriptional regulator compare
SMc01430 -0.9 -2.3 acetolactate synthase 3 regulatory subunit compare
SMc02659 -0.9 -1.7 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source L-Alanine in Sinorhizobium meliloti 1021

For carbon source L-Alanine across organisms