Experiment set9IT077 for Sinorhizobium meliloti 1021

Compare to:

L-Alanine carbon source

200 most detrimental genes:

  gene name fitness t score description  
SM_b20258 +9.1 21.1 transcriptional regulator compare
SMa0789 +7.0 29.3 GntR family transcriptional regulator compare
SMc01506 +2.6 18.3 RNA polymerase sigma factor compare
SMc00794 +2.5 16.1 two-component response regulator compare
SMc01504 +2.4 14.1 two-component response regulator compare
SMc03140 +1.8 8.6 transcriptional regulator compare
SMc00053 +1.5 1.3 monovalent cation/H+ antiporter subunit C compare
SMa2215 +1.4 3.8 GntR family transcriptional regulator compare
SMc02084 +1.3 1.3 biopolymer transport transmembrane protein compare
SM_b21679 +1.3 1.7 hypothetical protein compare
SMc02140 +1.2 0.6 phosphate regulon transcriptional regulatory protein compare
SMc01364 +1.2 1.8 DNA topoisomerase I compare
SMc01337 +1.2 1.9 hypothetical protein compare
SMa0113 +1.2 10.7 Sensor histidine kinase compare
SMc02485 +1.2 2.3 signal peptide protein compare
SM_b21633 +1.1 1.9 enoyl-CoA hydratase compare
SMc04296 +1.1 0.7 cell division protein FtsZ compare
SMc00854 +1.1 1.2 hypothetical protein compare
SMc02505 +1.1 1.5 hypothetical protein compare
SMc01144 +1.0 2.7 ribonuclease PH compare
SMc00800 +1.0 1.4 hypothetical protein compare
SMc02983 +1.0 5.6 ornithine, DAP, or arginine decarboxylase compare
SMc02149 +1.0 1.5 hypothetical protein compare
SMa0326 +1.0 2.7 short chain alcohol dehydrogenase-related dehydrogenase compare
SMa1597 +1.0 2.8 Pilus assembly chaperone compare
SMa1770 +0.9 1.4 hypothetical protein compare
SMc04344 +0.9 2.3 signal peptide protein compare
SMc03800 +0.9 2.5 hypothetical protein compare
SMc01418 +0.9 3.0 signal peptide protein compare
SMc02718 +0.9 1.3 hypothetical protein compare
SMa1053 +0.9 1.0 hypothetical protein compare
SMc02161 +0.8 1.2 transport transmembrane protein compare
SMc02497 +0.8 1.7 hypothetical protein compare
SM_b21140 +0.8 4.7 transcriptional regulator compare
SMc02906 +0.8 1.0 hypothetical protein compare
SMc01346 +0.8 2.2 leucyl/phenylalanyl-tRNA--protein transferase compare
SMa1161 +0.8 2.2 hypothetical protein compare
SMc03092 +0.8 2.5 transcriptional regulator compare
SMa1095 +0.8 1.0 hypothetical protein compare
SMa0748 +0.8 1.6 MucR family transcriptional regulator compare
SMa0126 +0.8 1.1 CspA8 Cold shock family protein compare
SM_b20025 +0.7 1.9 hypothetical protein compare
SMc03236 +0.7 1.4 glutamine amidotransferase compare
SMc04327 +0.7 0.8 hypothetical protein compare
SMc02544 +0.7 0.9 hypothetical protein compare
SMc00470 +0.7 1.8 hypothetical protein compare
SMc00369 +0.7 1.2 oxidoreductase compare
SMa0753 +0.7 0.7 hypothetical protein compare
SMa1160 +0.7 3.0 hypothetical protein compare
SMc01099 +0.7 1.6 tRNA pseudouridine synthase A compare
SMc01765 +0.7 1.0 hypothetical protein compare
SMc00650 +0.7 1.1 hypothetical protein compare
SMc00812 +0.7 2.7 hypothetical protein compare
SM_b21296 +0.7 1.4 hypothetical protein compare
SMc01153 +0.7 1.2 enoyl-CoA hydratase compare
SMc03863 +0.7 2.0 50S ribosomal protein L19 compare
SMa0638 +0.7 1.8 hypothetical protein compare
SM_b20549 +0.7 1.9 hypothetical protein compare
SMa1243 +0.7 1.9 Azu1 pseudoazurin compare
SMc01471 +0.7 2.0 cytochrome C oxidase assembly factor transmembrane protein compare
SM_b20953 +0.7 1.0 hypothetical protein compare
SMc00351 +0.7 1.2 hypothetical protein compare
SM_b20075 +0.7 1.1 hypothetical protein compare
SM_b21153 +0.7 1.8 acetyltransferase compare
SMa1174 +0.7 1.3 hypothetical protein compare
SMa1365 +0.7 1.3 ATP-binding protein compare
SMa1002 +0.7 0.9 hypothetical protein compare
SMa0114 +0.7 3.9 two-component response regulator compare
SM_b21224 +0.7 2.0 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase compare
SMa1232 +0.6 2.3 NapC membrane-bound tetraheme cytochrome c subunit compare
SM_b21173 +0.6 0.9 hypothetical protein compare
SMc02617 +0.6 1.2 hypothetical protein compare
SMc01280 +0.6 1.3 protease compare
SMa5010 +0.6 1.1 hypothetical protein compare
SMc00576 +0.6 2.4 hypothetical protein compare
SMa1308 +0.6 3.0 VirB8 type IV secretion protein compare
SMc02631 +0.6 1.3 hypothetical protein compare
SMa1696 +0.6 4.2 Sensor histidine kinase compare
SMc03935 +0.6 4.4 hypothetical protein compare
SM_b20271 +0.6 1.6 hypothetical protein compare
SMc04233 +0.6 2.4 hypothetical protein compare
SMc01764 +0.6 4.5 arginyl-tRNA-protein transferase compare
SMc01315 +0.6 0.9 hypothetical protein compare
SM_b20725 +0.6 1.2 hypothetical protein compare
SM_b21170 +0.6 2.6 guanylate kinase compare
SMc02868 +0.6 2.2 multidrug efflux system protein compare
SMc02117 +0.6 4.0 cystathionine beta-lyase compare
SMc04202 +0.6 2.4 transmembrane protein compare
SMc02478 +0.6 3.6 hypothetical protein compare
SMa2201 +0.6 2.2 hypothetical protein compare
SMc01417 +0.6 2.7 hypothetical protein compare
SMc01508 +0.6 1.4 hypothetical protein compare
SMc03899 +0.6 0.7 hypothetical protein compare
SMc00588 +0.6 1.4 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SM_b20003 +0.6 1.8 pyrroline-5-carboxylate reductase compare
SM_b21087 +0.6 1.2 conjugal transfer protein compare
SMc01275 +0.6 2.7 ribosomal large subunit pseudouridine synthase C protein compare
SMa0149 +0.6 2.3 transcription elongation factor regulatory protein compare
SMa1780 +0.6 2.7 hypothetical protein compare
SMa0144 +0.5 0.6 hypothetical protein compare
SMc01232 +0.5 1.5 hypothetical protein compare
SMa1111 +0.5 1.5 hypothetical protein compare
SMc01850 +0.5 1.2 hypothetical protein compare
SMc02886 +0.5 0.9 signal peptide protein compare
SMa1456 +0.5 1.9 hypothetical protein compare
SMa1742 +0.5 3.4 Fe3+-siderophore ABC transporter permease compare
SMa1697 +0.5 1.1 hypothetical protein compare
SMc01241 +0.5 1.2 hypothetical protein compare
SMc01831 +0.5 0.9 urease accessory protein compare
SMa1188 +0.5 1.8 NosX accesory protein compare
SMa0346 +0.5 1.9 NAD(P)H dehydrogenase compare
SMc03773 +0.5 2.5 hypothetical protein compare
SMc04439 +0.5 2.0 glycine betaine transport ATP-binding ABC transporter protein compare
SMc02693 +0.5 0.8 peptidyl-tRNA hydrolase compare
SMa0699 +0.5 2.3 hypothetical protein compare
SM_b21489 +0.5 1.7 cytochrome O ubiquinol oxidase subunit III compare
SM_b20632 +0.5 2.1 sugar uptake ABC transporter permease compare
SM_b20540 +0.5 0.8 hypothetical protein compare
SM_b20040 +0.5 2.0 hypothetical protein compare
SM_b21001 +0.5 1.0 hypothetical protein compare
SMa5030 +0.5 2.2 TetR family transcriptional regulator compare
SMc02799 +0.5 1.4 16S rRNA methyltransferase GidB compare
SM_b21412 +0.5 1.0 hypothetical protein compare
SMa1643 +0.5 1.4 hypothetical protein compare
SM_b20050 +0.5 1.4 hypothetical protein compare
SMc03973 +0.5 3.4 hypothetical protein compare
SMa1171 +0.5 1.5 hypothetical protein compare
SM_b20081 +0.5 2.0 hypothetical protein compare
SMc01176 +0.5 1.4 hypothetical protein compare
SM_b20343 +0.5 1.5 isoquinoline 1-oxidoreductase compare
SMc04003 +0.5 0.8 50S ribosomal protein L36 compare
SMc01991 +0.5 0.9 short chain dehydrogenase compare
SM_b20760 +0.5 1.7 carbon-phosphorus lyase compare
SM_b21084 +0.5 1.1 hypothetical protein compare
SM_b21329 +0.5 1.0 hypothetical protein compare
SMa0816 +0.5 1.1 FixX ferredoxin-like protein compare
SMa5011 +0.5 1.3 oxidoreductase compare
SMc03781 +0.5 2.5 rRNA large subunit methyltransferase compare
SMa1158 +0.5 1.2 hypothetical protein compare
SMa1162 +0.5 3.0 hypothetical protein compare
SMc00736 +0.5 1.2 DNA-3-methyladenine DNA glycosylase compare
SM_b20218 +0.5 1.6 sensor histidine kinase compare
SMa0581 +0.5 1.7 nitrate ABC transporter ATP-binding protein compare
SMc01278 +0.5 1.5 chaperone-like protein compare
SMc00468 +0.5 2.5 hypothetical protein compare
SMc04428 +0.5 1.2 hypothetical protein compare
SMc00298 +0.4 1.1 methionine aminopeptidase compare
SMc03235 +0.4 1.0 hypothetical protein compare
SMc03141 +0.4 2.2 hypothetical protein compare
SMa0450 +0.4 0.9 hypothetical protein compare
SMa0349 +0.4 1.0 hypothetical protein compare
SMa0643 +0.4 0.9 transposase compare
SMc02338 +0.4 0.6 periplasmic binding ABC transporter protein compare
SMc03127 +0.4 0.6 ABC transporter permease compare
SMa2257 +0.4 1.7 integrase-like protein compare
SMc01186 +0.4 1.4 hypothetical protein compare
SMc01644 +0.4 1.8 ABC transporter permease compare
SMc03878 +0.4 0.9 acetoacetyl-CoA reductase compare
SMa1960 +0.4 1.2 hypothetical protein compare
SMa0360 +0.4 1.9 transposase compare
SM_b20133 +0.4 2.3 hypothetical protein compare
SMc02989 +0.4 1.3 hypothetical protein compare
SMa1124 +0.4 1.5 hypothetical protein compare
SMc01930 +0.4 0.9 hypothetical protein compare
SMc00792 +0.4 1.8 hypothetical protein compare
SMc02474 +0.4 1.0 ABC transporter ATP-binding protein compare
SMa1276 +0.4 1.9 NorC nitric oxide reductase, small subunit compare
SMc01595 +0.4 1.0 sensor histidine kinase transmembrane protein compare
SM_b20519 +0.4 1.4 hypothetical protein compare
SMc01178 +0.4 0.8 multidrug transmembrane resistance signal peptide protein compare
SMc01357 +0.4 2.3 hypothetical protein compare
SMa1672 +0.4 2.5 hypothetical protein compare
SMc00684 +0.4 1.5 hypothetical protein compare
SMa1757 +0.4 1.5 Short chain compare
SMa0575 +0.4 1.1 hypothetical protein compare
SM_b20806 +0.4 1.5 hypothetical protein compare
SM_b20883 +0.4 1.3 hypothetical protein compare
SMc01002 +0.4 2.4 hypothetical protein compare
SM_b20597 +0.4 1.6 hypothetical protein compare
SMc04016 +0.4 2.7 homospermidine synthase compare
SMc00603 +0.4 2.4 short chain dehydrogenase compare
SMc02267 +0.4 2.9 hypothetical protein compare
SMc01573 +0.4 0.9 hypothetical protein compare
SM_b20464 +0.4 1.8 hypothetical protein compare
SMc02449 +0.4 1.3 acetyltransferase compare
SMa1141 +0.4 1.9 FNR/CRP family transcriptional regulator compare
SMc03802 +0.4 1.7 hypothetical protein compare
SM_b22001 +0.4 0.8 hypothetical protein compare
SMc01717 +0.4 1.2 mercuric reductase compare
SMa0621 +0.4 1.8 FixI2 E1-E2 type cation ATPase compare
SMa1096 +0.4 2.4 hypothetical protein compare
SMc02226 +0.4 1.7 hypothetical protein compare
SMa1092 +0.4 1.0 hypothetical protein compare
SMc01763 +0.4 2.1 hypothetical protein compare
SM_b20011 +0.4 1.2 hypothetical protein compare
SMa2347 +0.4 1.1 hypothetical protein compare
SM_b21201 +0.4 2.9 two-component sensor histidine kinase compare
SMa1091 +0.4 1.7 hypothetical protein compare
SMc02318 +0.4 1.0 hypothetical protein compare
SMa1264 +0.4 1.3 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source L-Alanine in Sinorhizobium meliloti 1021

For carbon source L-Alanine across organisms