Experiment set9IT076 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Levodopa 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.9 -4.7 SirA-like protein compare
Psyr_4340 -4.0 -11.9 phosphomethylpyrimidine kinase, putative compare
Psyr_0034 -3.5 -3.4 tryptophan synthase, beta chain compare
Psyr_0951 -3.5 -4.5 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1373 -3.5 -5.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1404 -3.3 -10.8 Ferritin and Dps compare
Psyr_0033 -3.3 -3.2 tryptophan synthase, alpha chain compare
Psyr_4740 -3.2 -8.3 thiazole-phosphate synthase compare
Psyr_4341 -3.1 -8.9 thiamine-phosphate diphosphorylase compare
Psyr_4091 -3.0 -6.7 8-oxo-dGTPase compare
Psyr_0255 -3.0 -3.5 glutamate-cysteine ligase compare
Psyr_4684 -2.5 -3.9 biotin synthesis protein BioC compare
Psyr_4687 -2.2 -10.0 biotin synthase compare
Psyr_0835 -2.2 -6.5 transcriptional regulator, TraR/DksA family compare
Psyr_3419 -2.1 -5.6 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_0454 -2.0 -7.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0529 -2.0 -5.4 Glycosyl transferase, group 1 compare
Psyr_4627 -2.0 -3.8 dimethyladenosine transferase compare
Psyr_4203 -1.9 -2.3 SsrA-binding protein compare
Psyr_0571 -1.9 -3.7 tRNA isopentenyltransferase compare
Psyr_1663 -1.9 -4.2 phosphoribosylanthranilate isomerase compare
Psyr_3208 -1.9 -2.7 NADH dehydrogenase subunit M compare
Psyr_4683 -1.9 -5.4 dethiobiotin synthase compare
Psyr_0202 -1.8 -8.1 transcriptional regulator, LysR family compare
Psyr_3287 -1.8 -1.9 DNA topoisomerase I compare
Psyr_4362 -1.8 -3.0 Rare lipoprotein A compare
Psyr_4991 -1.8 -2.4 hypothetical protein compare
Psyr_2980 -1.7 -3.4 UDP-glucose pyrophosphorylase compare
Psyr_0531 -1.7 -3.1 LmbE-like protein compare
Psyr_1408 -1.7 -3.5 Holliday junction endonuclease RuvC compare
Psyr_3358 -1.7 -2.5 transmembrane pair compare
Psyr_4519 -1.6 -5.7 General substrate transporter:Major facilitator superfamily compare
Psyr_3193 -1.6 -2.8 Transcription factor jumonji, jmjC compare
Psyr_2591 -1.6 -5.4 transport system permease protein compare
Psyr_0383 -1.6 -1.4 Twin-arginine translocation protein TatB compare
Psyr_4686 -1.6 -5.0 8-amino-7-oxononanoate synthase compare
Psyr_5135 -1.6 -0.9 Protein of unknown function DUF37 compare
Psyr_2255 -1.5 -3.0 ABC transporter compare
Psyr_0917 -1.4 -8.6 ABC-2 compare
Psyr_1953 -1.4 -2.5 conserved hypothetical protein compare
Psyr_2593 -1.4 -3.1 ABC transporter compare
Psyr_0574 -1.4 -4.9 protease FtsH subunit HflK compare
Psyr_2897 -1.4 -5.7 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2151 -1.3 -2.0 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_4897 -1.3 -3.0 imidazoleglycerol-phosphate dehydratase compare
Psyr_0918 -1.3 -9.4 ABC transporter compare
Psyr_5133 -1.3 -4.3 tRNA modification GTPase trmE compare
Psyr_1371 -1.3 -6.2 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_1236 -1.3 -4.0 transcriptional regulator, BadM/Rrf2 family compare
Psyr_3289 -1.3 -3.7 3-ketoacyl-CoA thiolase compare
Psyr_1418 -1.3 -3.5 Radical SAM compare
Psyr_4151 -1.2 -1.6 Phosphocarrier HPr protein compare
Psyr_5132 -1.2 -3.2 Glucose-inhibited division protein A subfamily compare
Psyr_4580 -1.2 -3.9 anthranilate phosphoribosyltransferase compare
Psyr_2594 -1.2 -1.5 unknown conserved protein in bacilli compare
Psyr_3886 -1.2 -1.8 methionyl-tRNA synthetase compare
Psyr_1613 -1.2 -3.1 septum site-determining protein MinC compare
Psyr_0724 -1.2 -1.8 conserved hypothetical protein compare
Psyr_1410 -1.2 -3.8 Holliday junction DNA helicase RuvB compare
Psyr_4490 -1.1 -2.3 transcriptional regulator, DeoR family compare
Psyr_2582 -1.1 -6.4 TonB-dependent siderophore receptor compare
Psyr_4089 -1.1 -4.4 PAS compare
Psyr_1910 -1.1 -3.6 VacJ-like lipoprotein compare
Psyr_5067 -1.1 -3.5 conserved hypothetical protein compare
Psyr_2590 -1.1 -2.4 Periplasmic binding protein compare
Psyr_0849 -1.0 -6.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3776 -1.0 -3.2 Cytosine deaminase compare
Psyr_2150 -1.0 -2.8 protein of unknown function DUF903 compare
Psyr_0838 -1.0 -3.0 Rieske [2Fe-2S] region compare
Psyr_0528 -1.0 -2.0 Carbamoyltransferase compare
Psyr_0170 -1.0 -2.7 heat shock protein Hsp15 compare
Psyr_0784 -1.0 -2.3 CheW-like protein compare
Psyr_2854 -1.0 -3.1 conserved hypothetical protein compare
Psyr_1791 -1.0 -2.7 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_2973 -1.0 -1.3 Glyoxalase I compare
Psyr_0817 -1.0 -3.8 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_3199 -1.0 -2.2 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_4115 -1.0 -1.9 phosphoheptose isomerase compare
Psyr_1946 -1.0 -1.3 diaminobutyrate aminotransferase apoenzyme compare
Psyr_0826 -0.9 -4.6 glucose-6-phosphate isomerase compare
Psyr_4015 -0.9 -2.4 conserved domain protein compare
Psyr_2557 -0.9 -1.8 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_3681 -0.9 -2.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_3620 -0.9 -1.9 hypothetical protein compare
Psyr_1419 -0.9 -2.5 preQ(0) biosynthesis protein QueC compare
Psyr_1859 -0.9 -2.7 conserved hypothetical protein compare
Psyr_1372 -0.9 -3.4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_2779 -0.9 -2.0 Phage minor tail compare
Psyr_4896 -0.9 -3.4 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_4512 -0.9 -4.4 putative phage-related protein compare
Psyr_0014 -0.9 -0.8 lipid A biosynthesis acyltransferase compare
Psyr_4418 -0.9 -2.1 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_5065 -0.9 -4.5 ATP-dependent DNA helicase UvrD compare
Psyr_4754 -0.9 -1.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_2508 -0.9 -1.8 transcriptional regulator, IclR family compare
Psyr_0936 -0.9 -5.4 Glycosyl transferase, group 1 compare
Psyr_1405 -0.9 -3.3 hypothetical protein compare
Psyr_3462 -0.9 -1.3 conserved hypothetical protein compare
Psyr_0475 -0.9 -2.4 Protein of unknown function YGGT compare
Psyr_3525 -0.9 -1.8 3-hydroxyisobutyrate dehydrogenase compare
Psyr_4143 -0.9 -1.4 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_1670 -0.9 -2.5 Short-chain dehydrogenase/reductase SDR compare
Psyr_0303 -0.9 -2.5 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_3581 -0.9 -3.3 ribosomal large subunit pseudouridine synthase B compare
Psyr_3427 -0.9 -1.6 conserved hypothetical protein compare
Psyr_0268 -0.9 -1.0 DSBA oxidoreductase compare
Psyr_1588 -0.9 -1.9 Putative exonuclease, RdgC compare
Psyr_4566 -0.9 -4.7 Peptidase M23B compare
Psyr_5072 -0.8 -1.2 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4618 -0.8 -2.1 regulatory protein, LuxR:Response regulator receiver compare
Psyr_4407 -0.8 -1.7 phosphoribosylamine--glycine ligase compare
Psyr_2399 -0.8 -2.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2778 -0.8 -2.0 Phage minor tail protein L compare
Psyr_4138 -0.8 -1.8 Toluene tolerance compare
Psyr_1097 -0.8 -1.5 glycine cleavage system H protein compare
Psyr_4194 -0.8 -2.4 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0914 -0.8 -5.3 Glycosyl transferase, group 1 compare
Psyr_4582 -0.8 -1.1 hypothetical protein compare
Psyr_3667 -0.8 -1.1 conserved hypothetical protein compare
Psyr_4386 -0.8 -2.0 conserved hypothetical protein compare
Psyr_3637 -0.8 -5.8 Glycosyl transferase, family 4 compare
Psyr_0179 -0.8 -1.7 Protein of unknown function DUF1289 compare
Psyr_4822 -0.8 -2.1 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_4140 -0.8 -1.3 Protein of unknown function DUF140 compare
Psyr_3162 -0.8 -1.7 Metalloprotease inhibitor/calysin compare
Psyr_0746 -0.8 -2.6 IS66 Orf2 like protein compare
Psyr_1944 -0.8 -1.2 Thioesterase compare
Psyr_0215 -0.8 -4.9 Exodeoxyribonuclease III xth compare
Psyr_2595 -0.8 -2.9 Dimethylmenaquinone methyltransferase compare
Psyr_1378 -0.8 -1.2 RecA protein compare
Psyr_4470 -0.8 -1.7 ABC transporter compare
Psyr_0916 -0.8 -4.8 GDP-mannose 4,6-dehydratase compare
Psyr_1458 -0.8 -1.8 hypothetical protein compare
Psyr_3489 -0.8 -1.9 FlgN compare
Psyr_1610 -0.8 -2.3 ribosomal large subunit pseudouridine synthase A compare
Psyr_2566 -0.8 -2.5 dihydroxyacetone kinase DhaK subunit compare
Psyr_2231 -0.8 -3.0 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_0579 -0.8 -4.9 RNAse R compare
Psyr_4183 -0.8 -1.2 protein translocase subunit secG compare
Psyr_2344 -0.8 -2.5 CDS compare
Psyr_0169 -0.8 -2.8 Hsp33 protein compare
Psyr_2105 -0.7 -2.3 conserved hypothetical protein compare
Psyr_3677 -0.7 -1.3 Aminotransferase, class I and II compare
Psyr_3842 -0.7 -2.8 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_3739 -0.7 -1.6 conserved hypothetical protein compare
Psyr_1017 -0.7 -1.6 type III effector HopJ1 compare
Psyr_0081 -0.7 -1.2 ABC transporter compare
Psyr_0923 -0.7 -3.5 hypothetical protein compare
Psyr_3282 -0.7 -3.5 transcriptional regulator, TetR family compare
Psyr_3808 -0.7 -1.1 hypothetical protein compare
Psyr_1839 -0.7 -1.7 Benzoate membrane transport protein compare
Psyr_2137 -0.7 -1.3 molybdopterin molybdochelatase compare
Psyr_3665 -0.7 -2.4 conserved hypothetical protein compare
Psyr_1984 -0.7 -2.0 3-isopropylmalate dehydratase, small subunit compare
Psyr_2227 -0.7 -1.1 conserved hypothetical protein compare
Psyr_3005 -0.7 -1.8 3-oxoadipate enol-lactonase compare
Psyr_1317 -0.7 -0.9 conserved hypothetical protein compare
Psyr_2256 -0.7 -1.7 ABC transporter compare
Psyr_0378 -0.7 -4.2 Glycosyl transferase, family 2 compare
Psyr_4093 -0.7 -2.6 glutamate N-acetyltransferase compare
Psyr_0085 -0.7 -2.1 conserved hypothetical protein compare
Psyr_3933 -0.7 -1.8 conserved hypothetical protein compare
Psyr_3904 -0.7 -3.1 Major intrinsic protein compare
Psyr_2245 -0.7 -1.7 conserved domain protein compare
Psyr_2180 -0.7 -2.1 transcriptional regulator, LysR family compare
Psyr_0044 -0.7 -0.7 transferase hexapeptide repeat protein compare
Psyr_5089 -0.7 -3.6 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_1747 -0.7 -2.5 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_4408 -0.7 -3.3 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_3896 -0.7 -1.0 BFD-like [2Fe-2S]-binding region compare
Psyr_0320 -0.7 -2.1 Protein of unknown function UPF0149 compare
Psyr_1783 -0.7 -1.5 CDS compare
Psyr_1751 -0.7 -2.7 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0699 -0.7 -1.6 CDS compare
Psyr_1277 -0.7 -1.1 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_4139 -0.7 -2.6 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_4134 -0.7 -3.2 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_2804 -0.7 -2.0 hypothetical protein compare
Psyr_3202 -0.7 -0.9 NADH dehydrogenase subunit G compare
Psyr_2636 -0.7 -1.6 TspO/MBR-related protein compare
Psyr_2476 -0.7 -1.2 Exodeoxyribonuclease III compare
Psyr_3672 -0.7 -1.9 cobalamin-5'-phosphate synthase compare
Psyr_1899 -0.7 -2.5 General substrate transporter:Major facilitator superfamily compare
Psyr_0087 -0.7 -3.0 Fatty acid desaturase compare
Psyr_3039 -0.7 -1.4 protein of unknown function DUF883 compare
Psyr_2474 -0.7 -1.8 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_1614 -0.7 -0.7 lipid A biosynthesis acyltransferase compare
Psyr_1864 -0.7 -2.2 spermidine synthase compare
Psyr_2906 -0.7 -1.0 Pilus retraction protein PilT compare
Psyr_0533 -0.7 -3.0 conserved hypothetical protein compare
Psyr_2351 -0.7 -1.5 tRNA synthetase, class-II (G, H, P and S) compare
Psyr_4141 -0.7 -2.5 ABC transporter compare
Psyr_2095 -0.6 -2.5 Conserved TM helix compare
Psyr_0920 -0.6 -5.5 Glycosyl transferase, group 1 compare
Psyr_3954 -0.6 -2.4 GTP-binding protein LepA compare
Psyr_2211 -0.6 -2.0 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_0282 -0.6 -2.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2383 -0.6 -1.8 Protein of unknown function DUF72 compare
Psyr_2592 -0.6 -2.2 transport system permease protein compare
Psyr_1198 -0.6 -1.2 type III secretion protein HrpF compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Levodopa across organisms