Experiment set9IT076 for Sinorhizobium meliloti 1021

Compare to:

L-Alanine carbon source

200 most detrimental genes:

  gene name fitness t score description  
SM_b20258 +9.3 25.7 transcriptional regulator compare
SMa0789 +6.9 22.5 GntR family transcriptional regulator compare
SMc01506 +2.5 17.8 RNA polymerase sigma factor compare
SMc00794 +2.4 14.2 two-component response regulator compare
SMc01504 +2.4 15.0 two-component response regulator compare
SMc03140 +1.6 7.9 transcriptional regulator compare
SM_b21679 +1.6 2.3 hypothetical protein compare
SMa2215 +1.5 3.4 GntR family transcriptional regulator compare
SMa0748 +1.5 3.7 MucR family transcriptional regulator compare
SMc01418 +1.4 4.4 signal peptide protein compare
SMa0753 +1.3 1.5 hypothetical protein compare
SMc02161 +1.3 1.7 transport transmembrane protein compare
SMc02833 +1.2 1.4 penicillin-insensitive murein endopeptidase compare
SMc00053 +1.2 0.9 monovalent cation/H+ antiporter subunit C compare
SMa0113 +1.1 10.0 Sensor histidine kinase compare
SMa1894 +1.1 2.2 methionine sulfoxide reductase B compare
SMc03184 +1.1 1.7 PH adaptation potassium efflux system G transmembrane protein compare
SMc00854 +1.1 2.3 hypothetical protein compare
SMc01099 +1.1 2.8 tRNA pseudouridine synthase A compare
SMa1933 +1.0 1.7 LysR family transcriptional regulator compare
SMc04327 +1.0 1.2 hypothetical protein compare
SMc04008 +0.9 3.1 hypothetical protein compare
SM_b21633 +0.9 1.5 enoyl-CoA hydratase compare
SMc02505 +0.9 1.3 hypothetical protein compare
SMc01089 +0.9 1.6 hypothetical protein compare
SM_b20260 +0.9 2.9 hypothetical protein compare
SMc00976 +0.9 2.8 enoyl-CoA hydratase compare
SMa1174 +0.9 1.4 hypothetical protein compare
SMc02901 +0.9 1.2 hypothetical protein compare
SMa1770 +0.9 1.4 hypothetical protein compare
SM_b20293 +0.9 1.2 hypothetical protein compare
SMc00030 +0.8 3.5 hypothetical protein compare
SM_b22005 +0.8 1.6 hypothetical protein compare
SM_b20811 +0.8 2.4 hypothetical protein compare
SMc00796 +0.8 3.8 hypothetical protein compare
SM_b20031 +0.8 2.0 hypothetical protein compare
SMc01143 +0.8 4.5 heat-inducible transcription repressor compare
SMc01131 +0.8 2.1 hypothetical protein compare
SMc02983 +0.8 4.0 ornithine, DAP, or arginine decarboxylase compare
SMa1095 +0.8 1.1 hypothetical protein compare
SMc01275 +0.8 3.7 ribosomal large subunit pseudouridine synthase C protein compare
SMc01850 +0.8 2.0 hypothetical protein compare
SMc02379 +0.8 4.5 permease compare
SMc04439 +0.7 2.9 glycine betaine transport ATP-binding ABC transporter protein compare
SM_b21140 +0.7 4.4 transcriptional regulator compare
SMc00648 +0.7 1.9 hypothetical protein compare
SMa1243 +0.7 2.6 Azu1 pseudoazurin compare
SMc03235 +0.7 1.9 hypothetical protein compare
SM_b21296 +0.7 1.5 hypothetical protein compare
SMc02388 +0.7 2.4 hypothetical protein compare
SMc01176 +0.7 3.5 hypothetical protein compare
SMc02071 +0.7 2.4 hydrolase glycosidase compare
SM_b20302 +0.7 1.4 hypothetical protein compare
SMc00650 +0.7 0.7 hypothetical protein compare
SMc00241 +0.7 1.6 transcriptional regulator compare
SMc01259 +0.7 1.7 hypothetical protein compare
SMc01518 +0.7 2.0 hypothetical protein compare
SM_b20025 +0.7 2.6 hypothetical protein compare
SMc02117 +0.7 4.9 cystathionine beta-lyase compare
SMa1808 +0.7 1.7 hypothetical protein compare
SMc01404 +0.7 2.6 aspartate racemase compare
SMc02787 +0.7 1.2 hypothetical protein compare
SMc01183 +0.7 0.7 LexA repressor compare
SM_b20413 +0.7 1.0 hypothetical protein compare
SMc04242 +0.7 1.2 zinc uptake regulation protein compare
SMc00073 +0.7 1.0 hypothetical protein compare
SMc02115 +0.7 0.4 hypothetical protein compare
SMc01777 +0.7 1.9 6,7-dimethyl-8-ribityllumazine synthase compare
SMa1136 +0.7 1.7 hypothetical protein compare
SMc02617 +0.7 1.9 hypothetical protein compare
SM_b20075 +0.6 1.3 hypothetical protein compare
SMc00800 +0.6 1.3 hypothetical protein compare
SMa0887 +0.6 2.1 hypothetical protein compare
SMc04182 +0.6 1.4 hypothetical protein compare
SMa1201 +0.6 1.5 hypothetical protein compare
SMa0279 +0.6 2.0 hypothetical protein compare
SMc03930 +0.6 1.2 sarcosine oxidase subunit gamma compare
SMc04202 +0.6 2.4 transmembrane protein compare
SMc01764 +0.6 4.1 arginyl-tRNA-protein transferase compare
SM_b22001 +0.6 1.3 hypothetical protein compare
SMa0114 +0.6 4.7 two-component response regulator compare
SMc03878 +0.6 1.3 acetoacetyl-CoA reductase compare
SMc02865 +0.6 1.6 acetyltransferase compare
SMc00029 +0.6 1.3 hypothetical protein compare
SMa0433 +0.6 2.2 hypothetical protein compare
SMc02647 +0.6 1.4 transcriptional regulator compare
SM_b20050 +0.6 1.5 hypothetical protein compare
SMa5011 +0.6 1.4 oxidoreductase compare
SMc02084 +0.6 0.5 biopolymer transport transmembrane protein compare
SMa0776 +0.6 1.5 TRm23b IS ATP-binding protein compare
SMc03004 +0.6 2.9 chemoreceptor (methyl-accepting chemotaxis protein) compare
SM_b20011 +0.6 2.4 hypothetical protein compare
SMc02860 +0.6 0.9 hypothetical protein compare
SMa1100 +0.6 2.1 hypothetical protein compare
SMc01929 +0.6 1.4 hypothetical protein compare
SMc00191 +0.6 1.3 hypothetical protein compare
SM_b21029 +0.6 2.5 hypothetical protein compare
SMc00974 +0.6 1.3 RNA methyltransferase compare
SMc02108 +0.6 2.5 hypothetical protein compare
SMa2253 +0.6 0.9 hypothetical protein compare
SMc01577 +0.6 0.5 hypothetical protein compare
SM_b20540 +0.6 1.0 hypothetical protein compare
SM_b20806 +0.6 2.2 hypothetical protein compare
SMc00080 +0.6 0.8 hypothetical protein compare
SMc04092 +0.6 1.5 hypothetical protein compare
SMc02631 +0.6 1.2 hypothetical protein compare
SMc01459 +0.6 1.8 hypothetical protein compare
SMa1161 +0.6 1.5 hypothetical protein compare
SMa0850 +0.6 2.6 hypothetical protein compare
SMa1696 +0.6 4.2 Sensor histidine kinase compare
SMc04223 +0.6 1.5 hypothetical protein compare
SMa0750 +0.6 1.9 LysR family transcriptional regulator compare
SM_b20390 +0.6 2.9 hypothetical protein compare
SMa1160 +0.6 2.3 hypothetical protein compare
SM_b20375 +0.6 1.9 transcriptional regulator compare
SMc03863 +0.6 1.6 50S ribosomal protein L19 compare
SMc02593 +0.6 1.7 hypothetical protein compare
SMa0121 +0.5 0.9 hypothetical protein compare
SMa0636 +0.5 2.5 hypothetical protein compare
SMc00829 +0.5 1.4 transcriptional regulator compare
SMc03996 +0.5 1.5 thiamine-phosphate pyrophosphorylase compare
SMc02052 +0.5 0.7 hypothetical protein compare
SMc02267 +0.5 2.8 hypothetical protein compare
SMc01278 +0.5 1.5 chaperone-like protein compare
SMc01608 +0.5 2.2 ABC transporter ATP-binding protein compare
SMc02178 +0.5 2.4 hypothetical protein compare
SMa2201 +0.5 2.6 hypothetical protein compare
SM_b21669 +0.5 0.8 hypothetical protein compare
SMa1702 +0.5 2.2 hypothetical protein compare
SM_b20427 +0.5 1.2 amino acid ABC transporter ATP-binding protein compare
SM_b21224 +0.5 1.8 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase compare
SMc02474 +0.5 1.5 ABC transporter ATP-binding protein compare
SMa1276 +0.5 2.1 NorC nitric oxide reductase, small subunit compare
SMc01619 +0.5 0.9 hypothetical protein compare
SMa1002 +0.5 0.7 hypothetical protein compare
SMa0265 +0.5 1.4 dehydrogenase compare
SM_b20040 +0.5 1.6 hypothetical protein compare
SMc01508 +0.5 1.9 hypothetical protein compare
SMc01800 +0.5 0.4 cytochrome C oxidase assembly transmembrane protein compare
SMa1162 +0.5 2.8 hypothetical protein compare
SMa1960 +0.5 1.5 hypothetical protein compare
SMc00045 +0.5 1.4 cytochrome C signal peptide protein compare
SMc02449 +0.5 0.7 acetyltransferase compare
SM_b20547 +0.5 1.5 hypothetical protein compare
SMc02544 +0.5 0.6 hypothetical protein compare
SMa1198 +0.5 2.4 copper export protein compare
SMc03928 +0.5 2.1 hypothetical protein compare
SMc02698 +0.5 1.6 adenine phosphoribosyltransferase compare
SM_b20270 +0.5 1.5 proline racemase compare
SMa0947 +0.5 1.9 hypothetical protein compare
SMc01464 +0.5 2.6 hypothetical protein compare
SMc03141 +0.5 2.8 hypothetical protein compare
SMc02175 +0.5 1.9 transcriptional regulator compare
SMc01244 +0.5 1.3 tRNA-Ala compare
SMc01370 +0.5 1.2 response regulator PleD compare
SMc03781 +0.5 2.5 rRNA large subunit methyltransferase compare
SM_b21580 +0.5 0.9 hypothetical protein compare
SMc02485 +0.5 0.8 signal peptide protein compare
SMc00084 +0.5 2.2 hypothetical protein compare
SMa2281 +0.5 0.9 hypothetical protein compare
SM_b21258 +0.5 2.2 adenylate cyclase compare
SMc04271 +0.5 2.1 hypothetical protein compare
SMc02312 +0.5 1.7 zinc-binding protein compare
SM_b21187 +0.5 2.5 LacI family transcriptional regulator compare
SMc02893 +0.5 1.2 transcriptional regulator compare
SMc03130 +0.5 2.0 hypothetical protein compare
SM_b21438 +0.5 2.1 C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide compare
SMc01144 +0.5 1.4 ribonuclease PH compare
SMc00159 +0.5 2.3 signal peptide protein compare
SMc01975 +0.5 1.3 transcriptional regulator compare
SM_b21663 +0.5 1.1 hypothetical protein compare
SMa0095 +0.5 1.2 D-aminopeptidase compare
SMc03127 +0.5 0.5 ABC transporter permease compare
SMc00718 +0.5 1.6 hypothetical protein compare
SMc01229 +0.5 1.4 acetyltransferase compare
SMc02333 +0.4 1.7 hypothetical protein compare
SMc04866 +0.4 0.8 hypothetical protein compare
SMa1007 +0.4 1.6 copper protein compare
SMc02693 +0.4 0.6 peptidyl-tRNA hydrolase compare
SMc01052 +0.4 2.4 hypothetical protein compare
SMc00320 +0.4 2.1 ribosome-binding factor A compare
SMc01132 +0.4 1.2 hypothetical protein compare
SMa1793 +0.4 1.6 hypothetical protein compare
SMc00038 +0.4 1.1 hypothetical protein compare
SMc01232 +0.4 2.1 hypothetical protein compare
SM_b21421 +0.4 1.4 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc00487 +0.4 2.3 hypothetical protein compare
SMa2219 +0.4 1.3 decarboxylase compare
SM_b21201 +0.4 3.1 two-component sensor histidine kinase compare
SMc03035 +0.4 2.2 flagellar transmembrane protein compare
SMc02989 +0.4 1.2 hypothetical protein compare
SMc00540 +0.4 1.2 hypothetical protein compare
SM_b21212 +0.4 1.3 hypothetical protein compare
SMc03967 +0.4 0.3 Holliday junction resolvase compare
SMc00006 +0.4 1.0 hypothetical protein compare
SMc00431 +0.4 1.5 hypothetical protein compare
SMa0085 +0.4 1.1 dehydrogenase compare
SMc01330 +0.4 1.9 transcriptional regulator compare
SMc01775 +0.4 2.4 acetyltransferase compare
SMc02900 +0.4 2.0 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source L-Alanine in Sinorhizobium meliloti 1021

For carbon source L-Alanine across organisms