Experiment set9IT075 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Piperic acid 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -3.6 -5.9 SirA-like protein compare
Psyr_4740 -3.4 -8.9 thiazole-phosphate synthase compare
Psyr_4341 -3.4 -10.6 thiamine-phosphate diphosphorylase compare
Psyr_4683 -3.2 -6.2 dethiobiotin synthase compare
Psyr_0033 -2.9 -2.8 tryptophan synthase, alpha chain compare
Psyr_3208 -2.9 -4.3 NADH dehydrogenase subunit M compare
Psyr_4203 -2.8 -4.2 SsrA-binding protein compare
Psyr_4340 -2.8 -10.0 phosphomethylpyrimidine kinase, putative compare
Psyr_0034 -2.8 -4.6 tryptophan synthase, beta chain compare
Psyr_4687 -2.8 -10.7 biotin synthase compare
Psyr_4686 -2.7 -8.5 8-amino-7-oxononanoate synthase compare
Psyr_0951 -2.6 -4.8 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4091 -2.3 -5.6 8-oxo-dGTPase compare
Psyr_0487 -2.2 -3.3 glutathione synthase compare
Psyr_4808 -2.1 -2.4 conserved hypothetical protein compare
Psyr_4115 -2.1 -3.5 phosphoheptose isomerase compare
Psyr_3193 -2.1 -3.3 Transcription factor jumonji, jmjC compare
Psyr_0383 -2.0 -1.3 Twin-arginine translocation protein TatB compare
Psyr_0454 -1.9 -6.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3419 -1.8 -4.7 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_1747 -1.8 -5.7 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3698 -1.8 -4.3 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_4582 -1.8 -1.8 hypothetical protein compare
Psyr_4580 -1.7 -3.4 anthranilate phosphoribosyltransferase compare
Psyr_4362 -1.7 -2.8 Rare lipoprotein A compare
Psyr_4519 -1.7 -6.5 General substrate transporter:Major facilitator superfamily compare
Psyr_1953 -1.7 -2.7 conserved hypothetical protein compare
Psyr_4009 -1.7 -6.8 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_0393 -1.6 -4.0 Protein of unknown function DUF971 compare
Psyr_0835 -1.6 -6.1 transcriptional regulator, TraR/DksA family compare
Psyr_4684 -1.6 -3.1 biotin synthesis protein BioC compare
Psyr_2980 -1.5 -3.0 UDP-glucose pyrophosphorylase compare
Psyr_1613 -1.5 -5.4 septum site-determining protein MinC compare
Psyr_5135 -1.5 -0.9 Protein of unknown function DUF37 compare
Psyr_0255 -1.5 -2.5 glutamate-cysteine ligase compare
Psyr_3179 -1.4 -2.8 DNA translocase FtsK compare
Psyr_1408 -1.4 -2.2 Holliday junction endonuclease RuvC compare
Psyr_0281 -1.4 -3.0 ABC transporter compare
Psyr_3739 -1.4 -2.9 conserved hypothetical protein compare
Psyr_1373 -1.4 -3.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3673 -1.4 -2.3 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_3199 -1.4 -2.6 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2088 -1.4 -1.6 2-methylaconitate cis-trans isomerase compare
Psyr_3665 -1.3 -3.3 conserved hypothetical protein compare
Psyr_3425 -1.3 -3.4 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_0571 -1.3 -4.1 tRNA isopentenyltransferase compare
Psyr_0531 -1.3 -2.2 LmbE-like protein compare
Psyr_4139 -1.3 -4.9 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_4194 -1.3 -4.8 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_4566 -1.3 -6.7 Peptidase M23B compare
Psyr_2591 -1.2 -4.7 transport system permease protein compare
Psyr_3202 -1.2 -2.1 NADH dehydrogenase subunit G compare
Psyr_2733 -1.2 -2.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_0528 -1.2 -2.2 Carbamoyltransferase compare
Psyr_3013 -1.1 -1.1 magnesium chelatase subunit ChlD compare
Psyr_2143 -1.1 -2.3 delta1-piperideine 2-carboxylate reductase compare
Psyr_0576 -1.1 -2.0 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_1910 -1.1 -3.3 VacJ-like lipoprotein compare
Psyr_1247 -1.1 -2.0 conserved hypothetical protein compare
Psyr_3904 -1.1 -5.7 Major intrinsic protein compare
Psyr_0475 -1.1 -2.9 Protein of unknown function YGGT compare
Psyr_1419 -1.1 -3.1 preQ(0) biosynthesis protein QueC compare
Psyr_2030 -1.1 -2.2 Calcium-binding EF-hand compare
Psyr_1588 -1.1 -2.9 Putative exonuclease, RdgC compare
Psyr_4015 -1.1 -2.7 conserved domain protein compare
Psyr_3848 -1.1 -3.4 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein compare
Psyr_1663 -1.0 -3.3 phosphoribosylanthranilate isomerase compare
Psyr_0529 -1.0 -3.3 Glycosyl transferase, group 1 compare
Psyr_0916 -1.0 -6.7 GDP-mannose 4,6-dehydratase compare
Psyr_5133 -1.0 -3.0 tRNA modification GTPase trmE compare
Psyr_3450 -1.0 -3.0 Hpt compare
Psyr_4601 -1.0 -2.5 hypothetical protein compare
Psyr_3287 -1.0 -1.4 DNA topoisomerase I compare
Psyr_4051 -0.9 -1.9 transcriptional regulator, ArsR family compare
Psyr_0622 -0.9 -2.4 transcriptional regulator, XRE family compare
Psyr_3701 -0.9 -1.6 thioredoxin, putative compare
Psyr_4464 -0.9 -1.3 lipoprotein, putative compare
Psyr_0918 -0.9 -6.8 ABC transporter compare
Psyr_0917 -0.9 -5.9 ABC-2 compare
Psyr_1372 -0.9 -3.0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_3282 -0.9 -3.7 transcriptional regulator, TetR family compare
Psyr_3281 -0.9 -1.8 Glycoside hydrolase, family 3, N-terminal compare
Psyr_4158 -0.9 -5.3 conserved hypothetical protein compare
Psyr_5132 -0.9 -2.4 Glucose-inhibited division protein A subfamily compare
Psyr_2990 -0.9 -1.5 conserved hypothetical protein compare
Psyr_3005 -0.9 -2.0 3-oxoadipate enol-lactonase compare
Psyr_0936 -0.9 -6.1 Glycosyl transferase, group 1 compare
Psyr_2830 -0.9 -1.9 conserved hypothetical protein compare
Psyr_4418 -0.9 -2.3 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_3055 -0.9 -2.0 Aminoglycoside phosphotransferase compare
Psyr_1947 -0.9 -2.1 MbtH-like protein compare
Psyr_1418 -0.9 -1.9 Radical SAM compare
Psyr_0831 -0.8 -2.1 Two-component response regulator CbrB compare
Psyr_4089 -0.8 -3.9 PAS compare
Psyr_4752 -0.8 -3.2 Insulinase-like:Peptidase M16, C-terminal compare
Psyr_0372 -0.8 -1.7 CDS compare
Psyr_1158 -0.8 -2.5 Gluconate transporter compare
Psyr_0826 -0.8 -3.7 glucose-6-phosphate isomerase compare
Psyr_3967 -0.8 -2.8 membrane protein TctB, putative compare
Psyr_1688 -0.8 -1.6 Protein of unknown function DUF1315 compare
Psyr_0849 -0.8 -5.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0040 -0.8 -3.6 OsmC-like protein compare
Psyr_1751 -0.8 -2.3 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4512 -0.8 -4.2 putative phage-related protein compare
Psyr_4386 -0.8 -2.2 conserved hypothetical protein compare
Psyr_3755 -0.8 -1.6 conserved hypothetical protein compare
Psyr_0580 -0.8 -2.2 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_2897 -0.8 -3.0 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1864 -0.8 -2.0 spermidine synthase compare
Psyr_2582 -0.8 -3.9 TonB-dependent siderophore receptor compare
Psyr_3357 -0.8 -1.8 transcriptional regulator, LysR family compare
Psyr_3489 -0.8 -2.9 FlgN compare
Psyr_3031 -0.8 -2.5 Thiolase compare
Psyr_4754 -0.8 -1.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_4133 -0.8 -4.6 histidinol dehydrogenase compare
Psyr_3581 -0.8 -3.3 ribosomal large subunit pseudouridine synthase B compare
Psyr_4141 -0.8 -2.6 ABC transporter compare
Psyr_2456 -0.8 -1.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_3015 -0.8 -3.7 cobaltochelatase CobN subunit compare
Psyr_2635 -0.8 -3.0 conserved hypothetical protein compare
Psyr_1800 -0.8 -2.3 transcriptional regulator, LysR family compare
Psyr_0070 -0.8 -1.9 hypothetical protein compare
Psyr_3676 -0.8 -2.2 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_1748 -0.7 -2.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_2854 -0.7 -2.7 conserved hypothetical protein compare
Psyr_2266 -0.7 -1.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2227 -0.7 -1.7 conserved hypothetical protein compare
Psyr_1094 -0.7 -2.5 cold-shock DNA-binding protein family compare
Psyr_0920 -0.7 -6.4 Glycosyl transferase, group 1 compare
Psyr_0633 -0.7 -1.9 conserved hypothetical protein compare
Psyr_0574 -0.7 -3.2 protease FtsH subunit HflK compare
Psyr_2383 -0.7 -1.9 Protein of unknown function DUF72 compare
Psyr_2593 -0.7 -1.4 ABC transporter compare
Psyr_5065 -0.7 -3.8 ATP-dependent DNA helicase UvrD compare
Psyr_1225 -0.7 -2.6 hypothetical protein compare
Psyr_1371 -0.7 -3.0 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0982 -0.7 -2.1 conserved hypothetical protein compare
Psyr_2668 -0.7 -2.0 Helix-turn-helix, Fis-type compare
Psyr_2200 -0.7 -0.8 UreE urease accessory, N-terminal compare
Psyr_2840 -0.7 -2.7 hypothetical protein compare
Psyr_2921 -0.7 -1.4 ADP-ribosylglycohydrolase compare
Psyr_4043 -0.7 -1.2 hypothetical protein compare
Psyr_2847 -0.7 -1.6 hypothetical protein compare
Psyr_2065 -0.7 -2.5 transcription elongation factor GreB compare
Psyr_1594 -0.7 -2.0 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_3354 -0.7 -3.1 Ankyrin compare
Psyr_3116 -0.7 -1.6 transcriptional regulator, CdaR family compare
Psyr_2557 -0.7 -0.9 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_3636 -0.7 -4.8 Polysaccharide biosynthesis protein CapD compare
Psyr_3954 -0.7 -2.9 GTP-binding protein LepA compare
Psyr_3429 -0.7 -1.5 CheW-like protein compare
Psyr_3672 -0.7 -1.8 cobalamin-5'-phosphate synthase compare
Psyr_3644 -0.7 -1.6 prephenate dehydrogenase compare
Psyr_0914 -0.7 -4.2 Glycosyl transferase, group 1 compare
Psyr_0838 -0.7 -1.4 Rieske [2Fe-2S] region compare
Psyr_3397 -0.7 -2.1 transcriptional regulator, LysR family compare
Psyr_2507 -0.7 -1.5 Endoribonuclease L-PSP compare
Psyr_1458 -0.7 -2.3 hypothetical protein compare
Psyr_5102 -0.7 -1.2 ABC transporter compare
Psyr_0246 -0.7 -3.9 aminomethyltransferase compare
Psyr_3407 -0.6 -2.7 conserved hypothetical protein compare
Psyr_1795 -0.6 -2.1 Taurine dioxygenase compare
Psyr_2592 -0.6 -1.6 transport system permease protein compare
Psyr_4967 -0.6 -1.9 conserved hypothetical protein compare
Psyr_1121 -0.6 -1.2 6-phosphogluconolactonase compare
Psyr_3674 -0.6 -1.3 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_2029 -0.6 -2.0 Protein of unknown function UPF0118 compare
Psyr_3900 -0.6 -1.2 conserved hypothetical protein compare
Psyr_3821 -0.6 -2.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_3637 -0.6 -4.6 Glycosyl transferase, family 4 compare
Psyr_1868 -0.6 -2.5 hypothetical protein compare
Psyr_2223 -0.6 -1.2 sarcosine oxidase, delta subunit compare
Psyr_2095 -0.6 -2.5 Conserved TM helix compare
Psyr_4316 -0.6 -1.7 conserved hypothetical protein compare
Psyr_1687 -0.6 -1.8 Rhomboid-like protein compare
Psyr_2809 -0.6 -1.8 hypothetical protein compare
Psyr_3224 -0.6 -2.3 Low molecular weight phosphotyrosine protein phosphatase compare
Psyr_1530 -0.6 -1.2 hypothetical protein compare
Psyr_3459 -0.6 -1.0 Helix-turn-helix, Fis-type compare
Psyr_3258 -0.6 -1.8 conserved hypothetical protein compare
Psyr_4621 -0.6 -3.2 Heat shock protein DnaJ, N-terminal compare
Psyr_0170 -0.6 -1.5 heat shock protein Hsp15 compare
Psyr_3776 -0.6 -2.7 Cytosine deaminase compare
Psyr_2537 -0.6 -1.4 conserved hypothetical protein compare
Psyr_2348 -0.6 -1.9 hypothetical protein compare
Psyr_0312 -0.6 -2.5 hypothetical protein compare
Psyr_2084 -0.6 -2.0 transcriptional regulator, GntR family compare
Psyr_5072 -0.6 -0.9 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_1964 -0.6 -2.2 Protein of unknown function DUF323 compare
Psyr_4138 -0.6 -2.0 Toluene tolerance compare
Psyr_5067 -0.6 -2.5 conserved hypothetical protein compare
Psyr_3118 -0.6 -1.8 transcriptional regulator, GntR family compare
Psyr_1069 -0.6 -1.6 molybdopterin synthase subunit MoaE compare
Psyr_2636 -0.6 -1.7 TspO/MBR-related protein compare
Psyr_3007 -0.6 -1.5 Protein of unknown function DUF1294 compare
Psyr_4278 -0.6 -1.4 regulatory protein, LuxR compare
Psyr_1892 -0.6 -2.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_1163 -0.6 -1.4 Isochorismatase hydrolase compare
Psyr_3852 -0.6 -1.5 lipoprotein SlyB, putative compare
Psyr_1236 -0.6 -2.0 transcriptional regulator, BadM/Rrf2 family compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Piperic acid across organisms