Experiment set9IT075 for Ralstonia sp. UNC404CL21Col

Compare to:

Sodium adipate carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS02160 -5.5 -6.6 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS13250 -5.2 -4.6 phosphoserine phosphatase SerB compare
ABZR87_RS14535 -4.6 -8.8 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS09450 -4.5 -11.1 prephenate dehydratase compare
ABZR87_RS07360 -4.4 -17.3 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS00285 -4.4 -3.0 acetylornithine transaminase compare
ABZR87_RS14500 -4.4 -17.9 tryptophan synthase subunit beta compare
ABZR87_RS02570 -4.4 -26.3 glutamate synthase-related protein compare
ABZR87_RS02565 -4.3 -7.2 glutamate synthase subunit beta compare
ABZR87_RS09465 -4.3 -9.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS14540 -4.3 -9.5 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS16170 -4.3 -6.5 argininosuccinate lyase compare
ABZR87_RS12585 -4.3 -12.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein compare
ABZR87_RS14115 -4.2 -5.0 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS02590 -4.2 -12.3 3-dehydroquinate synthase compare
ABZR87_RS02595 -4.2 -13.1 shikimate kinase compare
ABZR87_RS14950 -4.1 -5.5 acetolactate synthase small subunit compare
ABZR87_RS13790 -4.1 -11.8 chorismate synthase compare
ABZR87_RS00835 -4.1 -7.4 argininosuccinate synthase compare
ABZR87_RS09445 -4.1 -15.8 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS07380 -4.0 -16.8 FAD/FMN-binding oxidoreductase compare
ABZR87_RS14955 -4.0 -7.2 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS02145 -4.0 -3.8 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS05170 -3.9 -4.6 acetylglutamate kinase compare
ABZR87_RS20870 -3.9 -11.6 LysR family transcriptional regulator compare
ABZR87_RS02640 -3.9 -18.5 diaminopimelate decarboxylase compare
ABZR87_RS05305 -3.9 -15.1 TetR family transcriptional regulator compare
ABZR87_RS15790 -3.8 -6.2 3-oxoadipyl-CoA thiolase compare
ABZR87_RS16635 -3.8 -17.0 MFS family transporter conserved
ABZR87_RS14530 -3.7 -12.0 3-isopropylmalate dehydrogenase compare
ABZR87_RS12800 -3.6 -8.5 trigger factor compare
ABZR87_RS16660 -3.6 -9.6 helix-turn-helix domain-containing protein compare
ABZR87_RS14490 -3.5 -12.3 tryptophan synthase subunit alpha compare
ABZR87_RS14505 -3.5 -7.3 phosphoribosylanthranilate isomerase compare
ABZR87_RS08625 -3.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS05200 -3.5 -17.4 homoserine O-acetyltransferase compare
ABZR87_RS01810 -3.5 -4.7 glutamate 5-kinase compare
ABZR87_RS02155 -3.5 -7.3 anthranilate phosphoribosyltransferase compare
ABZR87_RS20880 -3.5 -10.3 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS20865 -3.4 -4.6 acyl-CoA dehydrogenase family protein compare
ABZR87_RS00185 -3.3 -5.5 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS22970 -3.3 -11.2 cystathionine gamma-synthase family protein compare
ABZR87_RS09935 -3.3 -6.1 amino acid aminotransferase compare
ABZR87_RS14655 -3.2 -9.1 3-hydroxyacyl-CoA dehydrogenase compare
ABZR87_RS00210 -3.0 -9.7 nitrite/sulfite reductase compare
ABZR87_RS02140 -3.0 -16.8 anthranilate synthase component I compare
ABZR87_RS20875 -2.8 -9.5 LysR family transcriptional regulator compare
ABZR87_RS04865 -2.7 -6.7 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS12790 -2.7 -5.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS21795 -2.7 -6.1 NUDIX domain-containing protein compare
ABZR87_RS11440 -2.6 -6.3 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS15440 -2.6 -5.1 ribonuclease G compare
ABZR87_RS00435 -2.6 -10.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS01615 -2.6 -4.3 RNB domain-containing ribonuclease compare
ABZR87_RS05100 -2.6 -4.6 RNA polymerase-binding protein DksA compare
ABZR87_RS07665 -2.5 -11.2 aminopeptidase P N-terminal domain-containing protein compare
ABZR87_RS05350 -2.4 -7.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS05590 -2.4 -3.2 orotate phosphoribosyltransferase compare
ABZR87_RS04125 -2.4 -9.2 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS10085 -2.3 -2.4 Rne/Rng family ribonuclease compare
ABZR87_RS12785 -2.3 -4.4 endopeptidase La compare
ABZR87_RS02445 -2.3 -5.9 Sec-independent protein translocase protein TatB compare
ABZR87_RS15800 -2.3 -7.8 3-oxoacid CoA-transferase subunit A compare
ABZR87_RS02385 -2.2 -7.4 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS13175 -2.2 -2.5 tRNA-Leu compare
ABZR87_RS07050 -2.2 -2.0 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS16185 -2.2 -3.3 dCTP deaminase compare
ABZR87_RS06770 -2.2 -8.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS13475 -2.1 -8.7 PAS domain S-box protein compare
ABZR87_RS08630 -2.1 -8.2 dihydroorotase compare
ABZR87_RS15795 -2.0 -9.9 CoA transferase subunit B compare
ABZR87_RS02480 -2.0 -3.3 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS16960 -2.0 -5.6 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS10565 -1.9 -5.4 cupin domain-containing protein compare
ABZR87_RS02225 -1.9 -11.9 ATP-binding protein compare
ABZR87_RS11925 -1.9 -11.8 phosphoenolpyruvate synthase compare
ABZR87_RS06395 -1.9 -4.2 response regulator compare
ABZR87_RS16080 -1.9 -4.0 P-II family nitrogen regulator compare
ABZR87_RS06845 -1.8 -8.7 heme o synthase compare
ABZR87_RS06645 -1.8 -2.3 TlpA disulfide reductase family protein compare
ABZR87_RS17215 -1.8 -8.2 1,4-alpha-glucan branching protein GlgB compare
ABZR87_RS02380 -1.8 -11.3 cytochrome bc complex cytochrome b subunit compare
ABZR87_RS15810 -1.8 -5.0 hypothetical protein compare
ABZR87_RS20690 -1.8 -2.6 recombinase-like helix-turn-helix domain-containing protein compare
ABZR87_RS08695 -1.7 -9.0 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS10120 -1.7 -1.8 YceD family protein compare
ABZR87_RS16180 -1.7 -5.8 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS02375 -1.7 -8.4 cytochrome c1 compare
ABZR87_RS00205 -1.7 -1.3 DUF934 domain-containing protein compare
ABZR87_RS08980 -1.7 -4.4 cell envelope integrity protein TolA compare
ABZR87_RS08970 -1.6 -7.1 protein TolQ compare
ABZR87_RS06495 -1.6 -3.4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS02655 -1.6 -8.7 anti-sigma factor compare
ABZR87_RS10930 -1.6 -2.6 outer membrane protein assembly factor BamB compare
ABZR87_RS02680 -1.6 -9.1 c-type cytochrome compare
ABZR87_RS00220 -1.6 -6.8 CysB family HTH-type transcriptional regulator compare
ABZR87_RS12795 -1.6 -4.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS02440 -1.5 -8.3 twin-arginine translocase subunit TatC compare
ABZR87_RS06810 -1.5 -7.0 cytochrome c oxidase assembly protein compare
ABZR87_RS14965 -1.5 -3.1 DUF3619 family protein compare
ABZR87_RS10525 -1.5 -1.8 L-threonylcarbamoyladenylate synthase compare
ABZR87_RS01645 -1.5 -5.7 type II 3-dehydroquinate dehydratase compare
ABZR87_RS13415 -1.5 -6.7 IclR family transcriptional regulator compare
ABZR87_RS07035 -1.5 -7.4 RNase adapter RapZ compare
ABZR87_RS04945 -1.5 -2.7 DUF4390 domain-containing protein compare
ABZR87_RS02235 -1.4 -5.1 response regulator compare
ABZR87_RS11940 -1.4 -3.6 SsrA-binding protein SmpB compare
ABZR87_RS17310 -1.4 -5.6 PadR family transcriptional regulator compare
ABZR87_RS21940 -1.4 -1.1 hypothetical protein compare
ABZR87_RS10240 -1.4 -2.6 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS08700 -1.4 -5.0 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS09515 -1.4 -1.4 cysteine synthase CysM compare
ABZR87_RS06840 -1.4 -7.2 COX15/CtaA family protein compare
ABZR87_RS08985 -1.3 -8.3 Tol-Pal system beta propeller repeat protein TolB compare
ABZR87_RS16250 -1.3 -4.2 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS07635 -1.3 -3.2 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS06800 -1.3 -10.4 cytochrome c oxidase subunit I compare
ABZR87_RS09710 -1.3 -3.2 tRNA-Arg compare
ABZR87_RS12600 -1.2 -4.3 ABC transporter ATP-binding protein compare
ABZR87_RS00200 -1.2 -4.1 phosphoadenylyl-sulfate reductase compare
ABZR87_RS08795 -1.2 -3.0 undecaprenyl-diphosphate phosphatase compare
ABZR87_RS23295 -1.2 -1.5 hypothetical protein compare
ABZR87_RS01110 -1.2 -7.1 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS13285 -1.2 -5.7 polyhydroxyalkanoate synthesis repressor PhaR compare
ABZR87_RS06745 -1.2 -4.9 S41 family peptidase compare
ABZR87_RS00195 -1.1 -3.7 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS08670 -1.1 -6.6 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
ABZR87_RS01035 -1.1 -5.0 histidine utilization repressor compare
ABZR87_RS07675 -1.1 -6.5 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR87_RS02230 -1.1 -4.3 response regulator compare
ABZR87_RS17145 -1.1 -7.8 AMP nucleosidase compare
ABZR87_RS05060 -1.1 -4.2 DUF484 family protein compare
ABZR87_RS00875 -1.1 -3.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS08990 -1.1 -4.6 peptidoglycan-associated lipoprotein Pal compare
ABZR87_RS12605 -1.1 -3.0 ABC transporter ATP-binding protein compare
ABZR87_RS19470 -1.0 -6.9 UDP-glucose 4-epimerase GalE compare
ABZR87_RS16125 -1.0 -3.3 heme biosynthesis protein HemY compare
ABZR87_RS03195 -1.0 -7.0 cation diffusion facilitator family transporter compare
ABZR87_RS09615 -1.0 -1.1 50S ribosomal protein L19 compare
ABZR87_RS21365 -1.0 -1.2 ligase-associated DNA damage response endonuclease PdeM compare
ABZR87_RS14575 -1.0 -4.2 GntR family transcriptional regulator compare
ABZR87_RS18630 -1.0 -1.4 class II fumarate hydratase compare
ABZR87_RS15685 -1.0 -4.5 TIGR00730 family Rossman fold protein compare
ABZR87_RS11125 -1.0 -3.7 cell division protein ZapE compare
ABZR87_RS06795 -1.0 -6.1 cytochrome c oxidase subunit II compare
ABZR87_RS20145 -1.0 -2.9 hypothetical protein compare
ABZR87_RS11195 -1.0 -6.1 pseudouridine synthase compare
ABZR87_RS00190 -1.0 -5.6 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS08400 -1.0 -2.5 glycine zipper 2TM domain-containing protein compare
ABZR87_RS00440 -0.9 -5.4 ATP-dependent Clp protease adapter ClpS compare
ABZR87_RS02020 -0.9 -6.7 long-chain fatty acid--CoA ligase compare
ABZR87_RS07355 -0.9 -5.1 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
ABZR87_RS12615 -0.9 -3.3 branched-chain amino acid ABC transporter permease compare
ABZR87_RS01780 -0.9 -1.5 MarC family protein compare
ABZR87_RS10950 -0.9 -4.7 FtsH protease activity modulator HflK compare
ABZR87_RS00580 -0.9 -3.5 hypothetical protein compare
ABZR87_RS04975 -0.9 -1.9 peptide deformylase compare
ABZR87_RS21815 -0.9 -0.8 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS13315 -0.9 -4.7 RluA family pseudouridine synthase compare
ABZR87_RS07705 -0.9 -2.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS23570 -0.9 -6.7 PAS domain-containing protein compare
ABZR87_RS13645 -0.9 -0.9 hypothetical protein compare
ABZR87_RS07020 -0.9 -6.4 dynamin-like GTPase family protein compare
ABZR87_RS09035 -0.9 -4.6 LacI family DNA-binding transcriptional regulator compare
ABZR87_RS02575 -0.9 -3.5 transposase compare
ABZR87_RS08655 -0.9 -3.1 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS15405 -0.9 -2.3 YebC/PmpR family DNA-binding transcriptional regulator compare
ABZR87_RS12620 -0.8 -6.3 branched-chain amino acid ABC transporter substrate-binding protein compare
ABZR87_RS12610 -0.8 -4.8 branched-chain amino acid ABC transporter permease compare
ABZR87_RS02035 -0.8 -3.5 substrate-binding domain-containing protein compare
ABZR87_RS06820 -0.8 -4.7 cytochrome c oxidase subunit 3 compare
ABZR87_RS01420 -0.8 -1.5 outer membrane protein assembly factor BamE compare
ABZR87_RS23180 -0.8 -1.6 ABC transporter ATP-binding protein compare
ABZR87_RS21925 -0.8 -1.9 hypothetical protein compare
ABZR87_RS04995 -0.8 -1.9 DNA topoisomerase III compare
ABZR87_RS00385 -0.8 -1.0 response regulator transcription factor compare
ABZR87_RS12625 -0.8 -5.8 3-(methylthio)propionyl-CoA ligase compare
ABZR87_RS08640 -0.8 -2.9 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABZR87_RS01640 -0.8 -2.3 TlpA disulfide reductase family protein compare
ABZR87_RS14615 -0.8 -4.5 DUF2863 family protein compare
ABZR87_RS11755 -0.8 -1.3 arsenate reductase compare
ABZR87_RS10570 -0.8 -4.6 peptidylprolyl isomerase compare
ABZR87_RS19435 -0.8 -1.6 trehalose-phosphatase compare
ABZR87_RS18695 -0.8 -5.1 sugar-binding transcriptional regulator compare
ABZR87_RS12300 -0.8 -3.2 muconolactone Delta-isomerase compare
ABZR87_RS05495 -0.8 -1.1 carboxymuconolactone decarboxylase family protein compare
ABZR87_RS18415 -0.8 -1.6 hypothetical protein compare
ABZR87_RS10955 -0.8 -4.0 protease modulator HflC compare
ABZR87_RS10780 -0.7 -3.1 PD-(D/E)XK nuclease family protein compare
ABZR87_RS14970 -0.7 -1.6 DUF3106 domain-containing protein compare
ABZR87_RS03565 -0.7 -3.9 TetR/AcrR family transcriptional regulator compare
ABZR87_RS22690 -0.7 -2.0 XRE family transcriptional regulator compare
ABZR87_RS16665 -0.7 -3.3 GNAT family N-acetyltransferase compare
ABZR87_RS01760 -0.7 -0.9 PP0621 family protein compare
ABZR87_RS18440 -0.7 -1.8 VOC family protein compare
ABZR87_RS10785 -0.7 -3.5 exodeoxyribonuclease V subunit beta compare
ABZR87_RS11245 -0.7 -2.5 translational GTPase TypA compare
ABZR87_RS03175 -0.7 -3.5 hypothetical protein compare
ABZR87_RS07645 -0.7 -3.1 Fis family transcriptional regulator compare
ABZR87_RS17525 -0.7 -5.0 helix-turn-helix domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium adipate in Ralstonia sp. UNC404CL21Col

For carbon source Sodium adipate across organisms