Experiment set9IT074 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Palmatine chloride 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1373 -3.8 -4.5 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1544 -3.6 -6.0 SirA-like protein compare
Psyr_4341 -3.5 -8.9 thiamine-phosphate diphosphorylase compare
Psyr_0034 -3.4 -4.1 tryptophan synthase, beta chain compare
Psyr_4340 -3.4 -12.2 phosphomethylpyrimidine kinase, putative compare
Psyr_0951 -3.2 -4.9 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4740 -2.9 -7.1 thiazole-phosphate synthase compare
Psyr_2980 -2.7 -5.4 UDP-glucose pyrophosphorylase compare
Psyr_1378 -2.7 -4.0 RecA protein compare
Psyr_4091 -2.5 -5.7 8-oxo-dGTPase compare
Psyr_4115 -2.4 -3.1 phosphoheptose isomerase compare
Psyr_1613 -2.3 -5.8 septum site-determining protein MinC compare
Psyr_3193 -2.3 -4.5 Transcription factor jumonji, jmjC compare
Psyr_1419 -2.3 -4.8 preQ(0) biosynthesis protein QueC compare
Psyr_4687 -2.3 -10.2 biotin synthase compare
Psyr_0475 -2.2 -2.8 Protein of unknown function YGGT compare
Psyr_0033 -2.1 -3.6 tryptophan synthase, alpha chain compare
Psyr_0885 -2.1 -3.0 conserved hypothetical protein compare
Psyr_0835 -2.0 -6.2 transcriptional regulator, TraR/DksA family compare
Psyr_4362 -1.9 -3.4 Rare lipoprotein A compare
Psyr_5132 -1.9 -3.1 Glucose-inhibited division protein A subfamily compare
Psyr_0724 -1.9 -2.2 conserved hypothetical protein compare
Psyr_1408 -1.9 -3.6 Holliday junction endonuclease RuvC compare
Psyr_3287 -1.8 -2.2 DNA topoisomerase I compare
Psyr_0918 -1.8 -11.6 ABC transporter compare
Psyr_4627 -1.8 -3.3 dimethyladenosine transferase compare
Psyr_4684 -1.8 -3.1 biotin synthesis protein BioC compare
Psyr_0529 -1.8 -4.6 Glycosyl transferase, group 1 compare
Psyr_4203 -1.8 -2.7 SsrA-binding protein compare
Psyr_4519 -1.8 -7.1 General substrate transporter:Major facilitator superfamily compare
Psyr_0487 -1.7 -3.1 glutathione synthase compare
Psyr_1910 -1.7 -5.5 VacJ-like lipoprotein compare
Psyr_0917 -1.7 -9.7 ABC-2 compare
Psyr_1650 -1.7 -2.9 aminodeoxychorismate lyase apoprotein compare
Psyr_4683 -1.7 -6.1 dethiobiotin synthase compare
Psyr_3419 -1.7 -4.0 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_1663 -1.6 -4.6 phosphoribosylanthranilate isomerase compare
Psyr_4788 -1.6 -2.3 lipoprotein, putative compare
Psyr_5135 -1.6 -0.8 Protein of unknown function DUF37 compare
Psyr_5067 -1.6 -5.7 conserved hypothetical protein compare
Psyr_0574 -1.5 -5.0 protease FtsH subunit HflK compare
Psyr_1371 -1.5 -7.1 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_4686 -1.5 -6.0 8-amino-7-oxononanoate synthase compare
Psyr_1783 -1.5 -2.1 CDS compare
Psyr_4566 -1.5 -7.1 Peptidase M23B compare
Psyr_2143 -1.5 -2.5 delta1-piperideine 2-carboxylate reductase compare
Psyr_0849 -1.4 -7.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2590 -1.4 -2.5 Periplasmic binding protein compare
Psyr_4194 -1.4 -3.4 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_5133 -1.4 -3.4 tRNA modification GTPase trmE compare
Psyr_0571 -1.4 -3.9 tRNA isopentenyltransferase compare
Psyr_0454 -1.4 -4.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0549 -1.4 -1.5 Metallophosphoesterase compare
Psyr_1268 -1.4 -5.7 extracellular solute-binding protein, family 3:SLT compare
Psyr_0383 -1.4 -1.1 Twin-arginine translocation protein TatB compare
Psyr_4009 -1.4 -4.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_0044 -1.4 -2.0 transferase hexapeptide repeat protein compare
Psyr_4991 -1.3 -2.1 hypothetical protein compare
Psyr_3020 -1.3 -2.4 precorrin-4 C11-methyltransferase compare
Psyr_0535 -1.3 -3.4 toluene tolerance protein, putative compare
Psyr_0255 -1.3 -2.2 glutamate-cysteine ligase compare
Psyr_4512 -1.3 -5.4 putative phage-related protein compare
Psyr_0936 -1.3 -7.2 Glycosyl transferase, group 1 compare
Psyr_1907 -1.3 -2.1 GTP cyclohydrolase I compare
Psyr_1140 -1.3 -2.5 Disulfide bond formation protein DsbB compare
Psyr_0826 -1.3 -5.4 glucose-6-phosphate isomerase compare
Psyr_0014 -1.3 -0.9 lipid A biosynthesis acyltransferase compare
Psyr_2080 -1.3 -4.5 aminodeoxychorismate synthase, subunit I compare
Psyr_0914 -1.2 -6.0 Glycosyl transferase, group 1 compare
Psyr_0916 -1.2 -6.5 GDP-mannose 4,6-dehydratase compare
Psyr_4361 -1.2 -1.9 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_3637 -1.2 -6.9 Glycosyl transferase, family 4 compare
Psyr_4138 -1.2 -3.0 Toluene tolerance compare
Psyr_3013 -1.2 -1.1 magnesium chelatase subunit ChlD compare
Psyr_0565 -1.1 -4.0 Protein of unknown function UPF0126 compare
Psyr_2591 -1.1 -4.2 transport system permease protein compare
Psyr_1946 -1.1 -1.0 diaminobutyrate aminotransferase apoenzyme compare
Psyr_0270 -1.1 -3.8 DNA polymerase I compare
Psyr_3906 -1.1 -1.2 regulatory protein, DeoR compare
Psyr_3241 -1.1 -2.4 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_2543 -1.1 -2.3 conserved hypothetical protein compare
Psyr_1227 -1.1 -2.5 Queuosine biosynthesis protein compare
Psyr_2929 -1.1 -2.7 transcriptional regulator, LysR family compare
Psyr_0378 -1.1 -5.9 Glycosyl transferase, family 2 compare
Psyr_1094 -1.1 -3.6 cold-shock DNA-binding protein family compare
Psyr_1556 -1.1 -1.8 hypothetical protein compare
Psyr_4141 -1.1 -3.3 ABC transporter compare
Psyr_3796 -1.1 -1.9 transcriptional regulator, LysR family compare
Psyr_3636 -1.1 -6.9 Polysaccharide biosynthesis protein CapD compare
Psyr_3445 -1.1 -1.6 Flagellar biosynthesis protein, FliO compare
Psyr_3698 -1.1 -3.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_4754 -1.1 -1.5 16S rRNA m(2)G-966 methyltransferase compare
Psyr_4580 -1.1 -3.6 anthranilate phosphoribosyltransferase compare
Psyr_0830 -1.1 -3.9 Poly(A) polymerase compare
Psyr_4139 -1.0 -3.9 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_3202 -1.0 -1.7 NADH dehydrogenase subunit G compare
Psyr_3476 -1.0 -1.7 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3886 -1.0 -1.3 methionyl-tRNA synthetase compare
Psyr_2854 -1.0 -3.7 conserved hypothetical protein compare
Psyr_1410 -1.0 -3.4 Holliday junction DNA helicase RuvB compare
Psyr_2592 -1.0 -2.5 transport system permease protein compare
Psyr_0920 -1.0 -7.9 Glycosyl transferase, group 1 compare
Psyr_2311 -1.0 -4.4 conserved hypothetical protein compare
Psyr_3432 -1.0 -1.6 MotA/TolQ/ExbB proton channel compare
Psyr_2594 -1.0 -0.9 unknown conserved protein in bacilli compare
Psyr_4140 -1.0 -1.3 Protein of unknown function DUF140 compare
Psyr_3791 -1.0 -2.4 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_3290 -1.0 -2.1 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_2897 -0.9 -3.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_3842 -0.9 -3.3 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_2030 -0.9 -1.9 Calcium-binding EF-hand compare
Psyr_0176 -0.9 -1.6 conserved hypothetical protein compare
Psyr_4158 -0.9 -4.9 conserved hypothetical protein compare
Psyr_2419 -0.9 -2.6 Protein of unknown function DUF480 compare
Psyr_0377 -0.9 -3.9 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_3450 -0.9 -2.8 Hpt compare
Psyr_3947 -0.9 -2.3 Methyltransferase, putative compare
Psyr_3008 -0.9 -3.4 Undecaprenyl-diphosphatase compare
Psyr_3358 -0.9 -2.1 transmembrane pair compare
Psyr_1733 -0.9 -1.5 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_4622 -0.9 -3.1 Nucleotidyl transferase compare
Psyr_0303 -0.9 -2.6 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_2406 -0.9 -1.1 Flavin reductase-like protein compare
Psyr_3665 -0.9 -2.8 conserved hypothetical protein compare
Psyr_3841 -0.9 -1.5 conserved hypothetical protein compare
Psyr_0919 -0.9 -5.5 Chromosome segregation ATPase-like protein compare
Psyr_1751 -0.9 -2.7 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2733 -0.9 -1.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_2330 -0.9 -2.5 FAD dependent oxidoreductase compare
Psyr_3449 -0.9 -2.3 Flagellar hook-length control protein compare
Psyr_0579 -0.9 -5.0 RNAse R compare
Psyr_3055 -0.9 -1.1 Aminoglycoside phosphotransferase compare
Psyr_4830 -0.9 -2.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0372 -0.9 -1.9 CDS compare
Psyr_2383 -0.9 -2.0 Protein of unknown function DUF72 compare
Psyr_4316 -0.9 -2.0 conserved hypothetical protein compare
Psyr_0575 -0.8 -1.8 protease FtsH subunit HflC compare
Psyr_3462 -0.8 -1.7 conserved hypothetical protein compare
Psyr_3293 -0.8 -1.8 UspA compare
Psyr_4843 -0.8 -3.4 NUDIX hydrolase compare
Psyr_4100 -0.8 -3.5 D-alanine--D-alanine ligase compare
Psyr_3464 -0.8 -4.6 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN compare
Psyr_3199 -0.8 -1.8 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_1540 -0.8 -1.7 hypothetical protein compare
Psyr_4887 -0.8 -5.2 Peptidase S41A, C-terminal protease compare
Psyr_3952 -0.8 -1.6 conserved hypothetical protein compare
Psyr_3889 -0.8 -1.4 conserved hypothetical protein compare
Psyr_2899 -0.8 -3.2 conserved hypothetical protein compare
Psyr_1022 -0.8 -1.4 conserved hypothetical protein compare
Psyr_4822 -0.8 -1.8 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1236 -0.8 -2.3 transcriptional regulator, BadM/Rrf2 family compare
Psyr_0215 -0.8 -5.1 Exodeoxyribonuclease III xth compare
Psyr_4967 -0.8 -2.3 conserved hypothetical protein compare
Psyr_4464 -0.8 -1.0 lipoprotein, putative compare
Psyr_4144 -0.8 -1.0 Protein of unknown function DUF1239 compare
Psyr_3342 -0.8 -1.7 conserved hypothetical protein compare
Psyr_2869 -0.8 -3.4 xenobiotic compound monooxygenase, DszA family compare
Psyr_3473 -0.8 -2.0 Flagellar P-ring protein compare
Psyr_2137 -0.8 -1.6 molybdopterin molybdochelatase compare
Psyr_4490 -0.8 -1.1 transcriptional regulator, DeoR family compare
Psyr_1688 -0.8 -1.4 Protein of unknown function DUF1315 compare
Psyr_2531 -0.8 -2.3 transcriptional regulator, LysR family compare
Psyr_3900 -0.8 -1.6 conserved hypothetical protein compare
Psyr_4043 -0.8 -1.5 hypothetical protein compare
Psyr_0827 -0.8 -2.3 pantothenate synthetase compare
Psyr_1555 -0.8 -3.2 Cobyrinic acid a,c-diamide synthase compare
Psyr_1532 -0.8 -2.6 hypothetical protein compare
Psyr_2346 -0.7 -3.2 conserved hypothetical protein compare
Psyr_3485 -0.7 -2.9 MCP methyltransferase, CheR-type compare
Psyr_3427 -0.7 -1.5 conserved hypothetical protein compare
Psyr_1024 -0.7 -1.0 Flavodoxin/nitric oxide synthase compare
Psyr_4350 -0.7 -1.8 Protein of unknown function DUF218 compare
Psyr_1930 -0.7 -1.9 hypothetical protein compare
Psyr_3640 -0.7 -2.2 conserved hypothetical protein compare
Psyr_0282 -0.7 -2.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4386 -0.7 -1.6 conserved hypothetical protein compare
Psyr_2620 -0.7 -1.2 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3954 -0.7 -2.3 GTP-binding protein LepA compare
Psyr_1720 -0.7 -1.7 Protein of unknown function DUF58 compare
Psyr_0788 -0.7 -3.2 Response regulator receiver compare
Psyr_3644 -0.7 -1.5 prephenate dehydrogenase compare
Psyr_1765 -0.7 -2.3 GCN5-related N-acetyltransferase compare
Psyr_5065 -0.7 -3.7 ATP-dependent DNA helicase UvrD compare
Psyr_1855 -0.7 -2.4 methylthioribulose-1-phosphate dehydratase compare
Psyr_4089 -0.7 -3.0 PAS compare
Psyr_3525 -0.7 -2.0 3-hydroxyisobutyrate dehydrogenase compare
Psyr_3489 -0.7 -1.9 FlgN compare
Psyr_1966 -0.7 -1.6 Peptidase M19, renal dipeptidase compare
Psyr_3475 -0.7 -1.8 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3852 -0.7 -2.1 lipoprotein SlyB, putative compare
Psyr_4610 -0.7 -2.0 phosphoglycolate phosphatase compare
Psyr_0202 -0.7 -3.7 transcriptional regulator, LysR family compare
Psyr_3723 -0.7 -1.1 CDS compare
Psyr_4134 -0.7 -3.2 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_0391 -0.7 -2.7 Poly granule associated compare
Psyr_0219 -0.7 -3.1 phosphomannomutase compare
Psyr_3084 -0.7 -1.5 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3051 -0.7 -2.3 transcriptional regulator, LysR family compare
Psyr_0386 -0.7 -2.3 phosphoribosyl-AMP cyclohydrolase compare
Psyr_0831 -0.7 -1.6 Two-component response regulator CbrB compare


Specific Phenotypes

For 1 genes in this experiment

For stress Palmatine chloride in Pseudomonas syringae pv. syringae B728a

For stress Palmatine chloride across organisms