Experiment set9IT074 for Sinorhizobium meliloti 1021

Compare to:

5-Aminovaleric acid carbon source

200 most important genes:

  gene name fitness t score description  
SMc02838 -7.0 -7.8 phosphoglyceromutase compare
SMc03776 -6.1 -4.2 gamma-glutamyl kinase compare
SMc00494 -6.0 -2.3 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02569 -5.9 -5.8 imidazole glycerol phosphate synthase subunit HisF compare
SMc00235 -5.3 -9.6 anthranilate phosphoribosyltransferase compare
SMc02137 -5.3 -3.7 ornithine carbamoyltransferase compare
SMc01726 -5.2 -6.6 acetylglutamate kinase compare
SMc03979 -5.2 -3.6 glyceraldehyde-3-phosphate dehydrogenase compare
SMc04045 -5.0 -10.7 dihydroxy-acid dehydratase compare
SMc00917 -5.0 -6.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMa1635 -5.0 -2.7 hypothetical protein compare
SMc04882 -4.9 -3.9 transcriptional regulator compare
SMc01028 -4.8 -15.9 phosphopyruvate hydratase compare
SMc02707 -4.8 -5.7 hypothetical protein compare
SMc01494 -4.8 -12.4 phosphoserine phosphatase compare
SMc00614 -4.8 -9.1 phosphoribosylglycinamide formyltransferase compare
SM_b21181 -4.8 -10.1 glutaryl-CoA dehydrogenase compare
SMc03797 -4.7 -11.4 homoserine O-succinyltransferase compare
SMc00493 -4.6 -8.7 phosphoribosylformylglycinamidine synthase I compare
SMc02766 -4.5 -18.4 tryptophan synthase subunit beta compare
SMc02899 -4.5 -13.1 prephenate dehydratase compare
SMc00640 -4.5 -10.8 phosphoserine aminotransferase compare
SMc00918 -4.5 -11.8 ATP phosphoribosyltransferase regulatory subunit compare
SMc03112 -4.4 -20.2 B12-dependent methionine synthase compare
SMc00768 -4.4 -13.1 isocitrate lyase compare
SMc04405 -4.3 -9.6 3-isopropylmalate dehydrogenase compare
SMc03981 -4.3 -5.4 phosphoglycerate kinase compare
SMc02767 -4.2 -11.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00293 -4.2 -13.4 homoserine dehydrogenase compare
SM_b21182 -4.2 -7.6 hypothetical protein compare
SMc00769 -4.2 -11.4 hypothetical protein compare
SMc01843 -4.1 -13.1 5,10-methylenetetrahydrofolate reductase compare
SMc02217 -4.1 -8.4 O-succinylhomoserine sulfhydrylase compare
SMc04088 -4.1 -8.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00236 -4.1 -6.8 Indole-3-glycerol phosphate synthase compare
SMc01431 -4.0 -16.8 acetolactate synthase 3 catalytic subunit compare
SMc02725 -4.0 -13.0 anthranilate synthase compare
SMc02765 -4.0 -11.8 tryptophan synthase subunit alpha compare
SMc00025 -4.0 -10.0 pyruvate phosphate dikinase compare
SMc02124 -4.0 -16.9 nitrite reductase compare
SMc01004 -3.9 -10.7 phosphoribosyl-AMP cyclohydrolase compare
SMc00131 -3.9 -14.7 transcriptional regulator compare
SMc03795 -3.9 -2.0 isopropylmalate isomerase small subunit compare
SMc02123 -3.9 -5.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00495 -3.8 -7.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02048 -3.8 -7.6 glycine cleavage system protein H compare
SMc00488 -3.8 -17.4 phosphoribosylformylglycinamidine synthase II compare
SMc01801 -3.8 -3.8 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc03823 -3.7 -11.0 isopropylmalate isomerase large subunit compare
SMc02055 -3.7 -2.5 phytoene synthase compare
SMc03777 -3.7 -9.5 gamma-glutamyl phosphate reductase compare
SMc02717 -3.6 -14.8 2-isopropylmalate synthase compare
SMc00017 -3.6 -1.8 homoserine kinase compare
SMc02049 -3.6 -19.3 glycine dehydrogenase compare
SMc02755 -3.5 -5.8 S-adenosyl-L-homocysteine hydrolase compare
SMc00615 -3.5 -12.0 phosphoribosylaminoimidazole synthetase compare
SMc04002 -3.5 -8.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01054 -3.5 -3.5 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00993 -3.5 -12.3 phosphoribosylamine--glycine ligase compare
SMc00090 -3.5 -10.1 sulfate adenylyltransferase compare
SMc02572 -3.4 -3.4 imidazole glycerol phosphate synthase subunit HisH compare
SMc03229 -3.4 -2.4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc03100 -3.3 -2.1 hypothetical protein compare
SMc02570 -3.3 -5.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc02308 -3.3 -3.9 hypothetical protein compare
SMc04001 -3.2 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00092 -3.2 -11.8 phosphoadenosine phosphosulfate reductase compare
SMc00412 -3.2 -6.0 orotidine 5'-phosphate decarboxylase compare
SMc02245 -3.2 -5.5 dihydroorotate dehydrogenase 2 compare
SMc00711 -3.1 -4.5 cyclohexadienyl dehydrogenase compare
SMc02047 -3.1 -7.4 glycine cleavage system aminomethyltransferase T compare
SMc02562 -3.0 -6.9 phosphoenolpyruvate carboxykinase compare
SMc00554 -2.8 -9.6 amidophosphoribosyltransferase compare
SMc01881 -2.8 -2.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01053 -2.8 -5.4 siroheme synthase compare
SMc02228 -2.8 -7.1 acetyl-CoA acetyltransferase compare
SMc04346 -2.8 -5.4 ketol-acid reductoisomerase compare
SMc00091 -2.7 -10.9 sulfate adenylyltransferase compare
SMc01360 -2.7 -3.1 aspartate carbamoyltransferase catalytic subunit compare
SMc03974 -2.7 -6.7 hypothetical protein compare
SMc01430 -2.6 -5.7 acetolactate synthase 3 regulatory subunit compare
SMc02641 -2.6 -2.5 UDP-glucose 6-dehydrogenase compare
SMc02165 -2.5 -7.6 orotate phosphoribosyltransferase compare
SMc02166 -2.5 -9.7 dihydroorotase compare
SMc01361 -2.5 -2.9 dihydroorotase compare
SMc02812 -2.4 -3.6 hypothetical protein compare
SMc02227 -2.2 -6.8 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc03879 -2.2 -7.6 Acetyl-CoA acetyltransferase (EC 2.3.1.9) (from data) compare
SMc01880 -2.2 -1.5 pantoate--beta-alanine ligase compare
SM_b20105 -2.2 -2.2 transcriptional regulator compare
SMc02307 -2.2 -6.8 histidinol dehydrogenase compare
SMc00619 -2.2 -1.4 hypothetical protein compare
SMc03978 -2.1 -1.4 transketolase compare
SMa0789 -2.1 -3.3 GntR family transcriptional regulator compare
SMc02280 -2.1 -2.3 hypothetical protein compare
SMc01206 -2.1 -1.2 queuine tRNA-ribosyltransferase compare
SMc00641 -2.1 -4.2 D-3-phosphoglycerate dehydrogenase compare
SMc02232 -2.1 -2.7 hypothetical protein compare
SMc01124 -2.0 -8.5 PII uridylyl-transferase compare
SMc02581 -2.0 -8.9 malate synthase G compare
SMc00450 -2.0 -1.3 protoheme IX farnesyltransferase compare
SMc02850 -2.0 -1.3 DNA polymerase I compare
SMc01951 -2.0 -8.2 high-affinity branched-chain amino acid ABC transporter permease compare
SMc02229 -1.9 -11.3 acyl-CoA dehydrogenase compare
SMa2020 -1.9 -6.7 Transcriptional regulator compare
SMc02753 -1.9 -1.0 PTS system transporter subunit IIA compare
SMc02172 -1.9 -8.4 transcriptional regulator compare
SMc01120 -1.9 -3.9 hypothetical protein compare
SMc02362 -1.8 -1.2 cytochrome c-type biogenesis protein CcmE compare
SMc00791 -1.8 -1.9 hypothetical protein compare
SMc00414 -1.8 -7.9 hypothetical protein compare
SMc01579 -1.8 -1.8 hypothetical protein compare
SMc00876 -1.7 -3.6 ATP-binding MRP protein compare
SMc01948 -1.7 -4.3 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SMc00726 -1.6 -0.8 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc00987 -1.6 -1.7 hypothetical protein compare
SMc02138 -1.6 -4.6 acetylornithine transaminase compare
SM_b20021 -1.6 -1.3 transcriptional regulator compare
SMc01505 -1.5 -1.9 hypothetical protein compare
SMc00189 -1.5 -3.5 cytochrome C1 protein compare
SMc02778 -1.5 -1.5 hydroxyacid aldolase compare
SMc04026 -1.5 -7.5 glutamate synthase compare
SMc00010 -1.4 -1.3 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00012 -1.4 -1.4 cytochrome C oxidase assembly protein compare
SMc04085 -1.4 -4.2 hypothetical protein compare
SMc02640 -1.4 -4.1 UDP-glucuronic acid epimerase compare
SMc02683 -1.4 -1.4 hypothetical protein compare
SMc03069 -1.4 -1.7 6-phosphogluconolactonase compare
SMc02112 -1.4 -6.1 hypothetical protein compare
SMc01842 -1.3 -1.4 methyltransferase transcription regulator protein compare
SMc01949 -1.3 -4.0 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SMc01950 -1.3 -8.2 high-affinity branched-chain amino acid ABC transporter permease compare
SMc02434 -1.3 -2.3 hypothetical protein compare
SMc02435 -1.3 -1.2 methyltransferase compare
SMc03158 -1.3 -1.5 ABC transporter permease compare
SMc00013 -1.3 -1.1 cytochrome C oxidase subunit III transmembrane protein compare
SMc04005 -1.2 -6.0 pyruvate kinase compare
SMc01946 -1.2 -4.3 leucine-specific binding protein compare
SMc02451 -1.2 -1.2 hypothetical protein compare
SMc04000 -1.2 -0.9 hypothetical protein compare
SMc04028 -1.2 -8.5 glutamate synthase compare
SMc03008 -1.1 -1.1 chemotaxis protein compare
SMc00928 -1.1 -1.0 signal peptide protein compare
SMc02144 -1.1 -2.0 phosphate ABC transporter permease compare
SMc04404 -1.1 -1.4 amino acid efflux transmembrane protein compare
SMc04174 -1.1 -1.4 signal peptide protein compare
SMc03763 -1.1 -1.0 cytosine-specific methyltransferase compare
SMc01845 -1.1 -1.4 transglycosylase transmembrane protein compare
SMc00087 -1.1 -6.9 hydrolase compare
SMc02860 -1.1 -1.7 hypothetical protein compare
SMc00302 -1.1 -1.3 hypothetical protein compare
SMc00982 -1.1 -4.2 dioxygenase compare
SMc02689 -1.1 -5.9 aldehyde dehydrogenase compare
SMc02141 -1.1 -1.2 phosphate transporter PhoU compare
SMc02476 -1.1 -3.5 hypothetical protein compare
SMc03895 -1.0 -8.3 pyruvate carboxylase compare
SMc00981 -1.0 -4.0 ferredoxin protein compare
SMa2215 -1.0 -2.6 GntR family transcriptional regulator compare
SMc00650 -1.0 -1.2 hypothetical protein compare
SMc03028 -1.0 -2.1 flagellar basal body rod protein FlgC compare
SM_b20258 -1.0 -2.8 transcriptional regulator compare
SM_b20312 -1.0 -5.4 dihydroxyacetone kinase compare
SMc02716 -1.0 -2.3 hypothetical protein compare
SMc01164 -1.0 -4.1 hypothetical protein compare
SMc00355 -0.9 -2.3 hypothetical protein compare
SM_b21598 -0.9 -2.9 transcriptional regulator compare
SMa2289 -0.9 -1.2 hypothetical protein compare
SMc04454 -0.9 -3.6 ABC transporter ATP-binding protein compare
SMa0874 -0.9 -2.0 NodN dehydratase compare
SMc01768 -0.9 -3.3 transcriptional regulator compare
SMc02225 -0.9 -3.1 hypothetical protein compare
SMa0659 -0.9 -1.4 cytochrome c binding protein, carboxyl terminus compare
SMc04348 -0.9 -1.4 transcriptional regulator compare
SMc00569 -0.9 -1.7 hypothetical protein compare
SMc02724 -0.9 -1.6 hypothetical protein compare
SMc02844 -0.9 -1.0 transcriptional regulator compare
SMc03242 -0.9 -1.5 GTP-binding protein compare
SMc01858 -0.9 -1.0 S-adenosyl-methyltransferase MraW compare
SMc01207 -0.9 -1.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SM_b20323 -0.9 -0.8 transcriptional regulator compare
SMc01770 -0.9 -1.5 serine hydroxymethyltransferase compare
SMc02354 -0.9 -2.2 hypothetical protein compare
SMc02714 -0.8 -1.1 hypothetical protein compare
SMc03175 -0.8 -2.0 nucleoside hydrolase compare
SMc02909 -0.8 -0.8 transglycosylase transmembrane protein compare
SM_b21687 -0.8 -2.3 hypothetical protein compare
SMc01220 -0.8 -2.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02250 -0.8 -2.0 large-conductance mechanosensitive channel compare
SMc00727 -0.8 -3.8 3-hydroxybutyryl-CoA dehydrogenase compare
SMc03801 -0.8 -1.5 thioredoxin protein compare
SM_b20314 -0.8 -3.8 glycerone kinase compare
SM_b20313 -0.8 -1.8 glycerone kinase compare
SMc04298 -0.8 -2.0 hypothetical protein compare
SM_b20555 -0.8 -2.1 hypothetical protein compare
SMc02975 -0.8 -3.8 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SM_b20930 -0.8 -2.1 sugar uptake ABC transporter ATP-binding protein compare
SMa0340 -0.8 -3.2 TrpR binding protein WrbA compare
SMc00405 -0.8 -3.9 hypothetical protein compare
SMa1442 -0.7 -3.6 GntR family transcriptional regulator compare
SMc01939 -0.7 -1.0 urease subunit beta compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source 5-Aminovaleric acid in Sinorhizobium meliloti 1021

For carbon source 5-Aminovaleric acid across organisms