Experiment set9IT073 for Sinorhizobium meliloti 1021

Compare to:

Potassium acetate carbon source

200 most important genes:

  gene name fitness t score description  
SMc02838 -7.4 -7.2 phosphoglyceromutase compare
SMc03797 -7.2 -7.1 homoserine O-succinyltransferase compare
SMc04045 -6.8 -6.6 dihydroxy-acid dehydratase compare
SMc02766 -6.7 -17.5 tryptophan synthase subunit beta compare
SMc00236 -6.7 -6.5 Indole-3-glycerol phosphate synthase compare
SMc02767 -6.6 -9.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02899 -6.4 -11.5 prephenate dehydratase compare
SMc00293 -6.4 -10.6 homoserine dehydrogenase compare
SMc00235 -6.3 -7.5 anthranilate phosphoribosyltransferase compare
SMc01028 -6.2 -12.0 phosphopyruvate hydratase compare
SMa1635 -6.2 -2.2 hypothetical protein compare
SMc04405 -6.2 -10.4 3-isopropylmalate dehydrogenase compare
SMc02765 -6.2 -16.9 tryptophan synthase subunit alpha compare
SMc02725 -6.1 -11.6 anthranilate synthase compare
SMc01494 -5.9 -10.3 phosphoserine phosphatase compare
SMc01801 -5.8 -3.5 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02717 -5.7 -15.1 2-isopropylmalate synthase compare
SMc04002 -5.6 -8.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00918 -5.5 -9.2 ATP phosphoribosyltransferase regulatory subunit compare
SMc02123 -5.5 -3.9 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc01843 -5.5 -12.4 5,10-methylenetetrahydrofolate reductase compare
SMc01004 -5.5 -12.1 phosphoribosyl-AMP cyclohydrolase compare
SMc00615 -5.4 -14.4 phosphoribosylaminoimidazole synthetase compare
SMc02138 -5.4 -8.3 acetylornithine transaminase compare
SMc01726 -5.4 -4.7 acetylglutamate kinase compare
SMc01439 -5.3 -3.1 hypothetical protein compare
SMc03823 -5.3 -11.1 isopropylmalate isomerase large subunit compare
SMc02975 -5.3 -8.8 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SMc01054 -5.2 -4.6 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc02137 -5.2 -3.6 ornithine carbamoyltransferase compare
SMc00495 -5.2 -4.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00025 -5.1 -7.8 pyruvate phosphate dikinase compare
SMc00640 -5.1 -9.8 phosphoserine aminotransferase compare
SMc04093 -5.1 -19.1 acetyl-CoA synthetase conserved
SMc02569 -5.1 -4.4 imidazole glycerol phosphate synthase subunit HisF compare
SMc00768 -5.1 -11.8 isocitrate lyase conserved
SMc00554 -5.1 -6.9 amidophosphoribosyltransferase compare
SMc03979 -5.1 -3.5 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00488 -5.0 -17.2 phosphoribosylformylglycinamidine synthase II compare
SMc00769 -5.0 -11.5 hypothetical protein compare
SMc00993 -5.0 -11.9 phosphoribosylamine--glycine ligase compare
SMc03112 -4.9 -14.2 B12-dependent methionine synthase compare
SMc02217 -4.9 -7.5 O-succinylhomoserine sulfhydrylase compare
SMc04028 -4.8 -19.5 glutamate synthase compare
SMc00090 -4.8 -11.9 sulfate adenylyltransferase compare
SMc04088 -4.8 -10.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02562 -4.7 -9.1 phosphoenolpyruvate carboxykinase compare
SMc00727 -4.7 -12.0 3-hydroxybutyryl-CoA dehydrogenase compare
SMc01431 -4.7 -14.8 acetolactate synthase 3 catalytic subunit compare
SMc00917 -4.7 -4.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02249 -4.7 -16.9 sensory transduction histidine kinase transmembrane protein conserved
SMc00711 -4.6 -4.8 cyclohexadienyl dehydrogenase compare
SMc00131 -4.5 -15.3 transcriptional regulator compare
SMc04001 -4.5 -1.6 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc03776 -4.5 -4.4 gamma-glutamyl kinase compare
SMc02245 -4.4 -4.9 dihydroorotate dehydrogenase 2 compare
SMc00494 -4.4 -2.2 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02572 -4.4 -3.2 imidazole glycerol phosphate synthase subunit HisH compare
SMc03777 -4.4 -8.2 gamma-glutamyl phosphate reductase compare
SMc04026 -4.4 -9.4 glutamate synthase compare
SMc02166 -4.3 -11.1 dihydroorotase compare
SMc00614 -4.3 -7.1 phosphoribosylglycinamide formyltransferase compare
SMc02570 -4.2 -6.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc02229 -4.2 -13.3 acyl-CoA dehydrogenase compare
SMc00092 -4.2 -12.4 phosphoadenosine phosphosulfate reductase compare
SMc02124 -4.1 -14.1 nitrite reductase compare
SMc00412 -4.1 -4.8 orotidine 5'-phosphate decarboxylase compare
SMc01845 -4.0 -2.4 transglycosylase transmembrane protein compare
SMc02308 -3.9 -4.3 hypothetical protein compare
SMc00493 -3.9 -5.8 phosphoribosylformylglycinamidine synthase I compare
SMc03795 -3.8 -1.9 isopropylmalate isomerase small subunit compare
SMc03880 -3.8 -12.0 hypothetical protein compare
SMa0144 -3.8 -1.3 hypothetical protein compare
SMc03981 -3.8 -4.2 phosphoglycerate kinase compare
SM_b21177 -3.7 -6.9 phosphate uptake ABC transporter ATP-binding protein compare
SMc02581 -3.6 -10.6 malate synthase G compare
SMc01770 -3.6 -1.5 serine hydroxymethyltransferase compare
SMc00294 -3.6 -9.5 aminotransferase compare
SMc00091 -3.6 -12.9 sulfate adenylyltransferase compare
SMc00017 -3.5 -1.7 homoserine kinase compare
SMc02755 -3.5 -4.8 S-adenosyl-L-homocysteine hydrolase compare
SMc01360 -3.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc02307 -3.4 -8.5 histidinol dehydrogenase compare
SMc01881 -3.4 -2.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01053 -3.4 -5.1 siroheme synthase compare
SMc03069 -3.4 -2.9 6-phosphogluconolactonase compare
SMc01430 -3.3 -2.2 acetolactate synthase 3 regulatory subunit compare
SMc03100 -3.2 -1.9 hypothetical protein compare
SMc01578 -3.2 -9.7 aspartate aminotransferase compare
SMc02753 -3.2 -1.1 PTS system transporter subunit IIA compare
SMc02248 -3.2 -2.9 transcriptional regulator compare
SMc00012 -3.2 -1.9 cytochrome C oxidase assembly protein compare
SMc02165 -3.2 -8.1 orotate phosphoribosyltransferase compare
SMc02228 -3.1 -6.9 acetyl-CoA acetyltransferase compare
SMc02640 -3.1 -5.1 UDP-glucuronic acid epimerase compare
SMc01206 -3.1 -1.4 queuine tRNA-ribosyltransferase compare
SM_b21174 -3.0 -3.9 phosphate uptake ABC transporter permease compare
SMc00726 -3.0 -1.0 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01124 -3.0 -8.6 PII uridylyl-transferase compare
SMc02724 -3.0 -3.5 hypothetical protein compare
SMc02574 -3.0 -4.4 imidazoleglycerol-phosphate dehydratase compare
SMc04330 -2.9 -2.6 trimethylamine methyltransferase compare
SMc00876 -2.9 -3.5 ATP-binding MRP protein compare
SM_b21176 -2.9 -5.0 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00009 -2.9 -6.3 cytochrome C oxidase subunit II protein compare
SMc00513 -2.8 -6.9 amino acid-binding periplasmic protein compare
SMc00103 -2.8 -5.7 alpha-halocarboxylic acid dehalogenase compare
SMc01768 -2.8 -4.7 transcriptional regulator compare
SMc02478 -2.8 -9.7 hypothetical protein compare
SMc00013 -2.7 -2.1 cytochrome C oxidase subunit III transmembrane protein compare
SMc04346 -2.7 -4.1 ketol-acid reductoisomerase compare
SM_b20313 -2.7 -6.3 glycerone kinase compare
SMc02172 -2.7 -10.9 transcriptional regulator compare
SMc02707 -2.6 -4.0 hypothetical protein compare
SMc01361 -2.6 -1.8 dihydroorotase compare
SMc01454 -2.6 -9.2 hypothetical protein compare
SMc01842 -2.6 -2.8 methyltransferase transcription regulator protein compare
SMc01852 -2.6 -8.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SM_b20312 -2.5 -8.1 dihydroxyacetone kinase compare
SMc03229 -2.5 -2.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02047 -2.4 -6.1 glycine cleavage system aminomethyltransferase T compare
SMc00088 -2.3 -1.5 hypothetical protein compare
SMc00188 -2.3 -7.6 cytochrome B transmembrane protein compare
SMc02048 -2.2 -8.6 glycine cleavage system protein H compare
SMc00189 -2.2 -5.1 cytochrome C1 protein compare
SMc02227 -2.2 -5.6 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc02385 -2.2 -2.6 hypothetical protein compare
SMa0955 -2.2 -1.7 GntR family transcriptional regulator compare
SMc00169 -2.2 -13.0 malic enzyme compare
SMc01041 -2.1 -2.1 NIFR3-like protein compare
SMc00522 -2.1 -10.3 ATP-dependent RNA helicase compare
SMc04043 -2.1 -6.1 hypothetical protein compare
SMc01880 -2.1 -1.4 pantoate--beta-alanine ligase compare
SMc02049 -2.1 -13.3 glycine dehydrogenase compare
SMc04005 -2.1 -4.9 pyruvate kinase compare
SMc03978 -2.0 -1.4 transketolase compare
SMc02641 -2.0 -2.3 UDP-glucose 6-dehydrogenase compare
SM_b21175 -2.0 -3.1 phosphate uptake ABC transporter permease compare
SMc02115 -2.0 -0.7 hypothetical protein compare
SMc00483 -2.0 -7.6 glutamate racemase compare
SMc00451 -2.0 -6.2 processing protease compare
SMc03993 -2.0 -4.6 hypothetical protein compare
SMc02758 -2.0 -3.4 nucleotidyl transferase compare
SMc01220 -1.9 -3.6 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00334 -1.9 -1.1 cytidylate kinase compare
SMc00761 -1.9 -8.9 oxidoreductase compare
SMc01043 -1.9 -6.5 nitrogen assimilation regulatory protein compare
SMc00010 -1.8 -1.2 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02362 -1.8 -1.2 cytochrome c-type biogenesis protein CcmE compare
SM_b21598 -1.8 -5.5 transcriptional regulator compare
SMc01929 -1.8 -2.6 hypothetical protein compare
SMc02897 -1.8 -2.3 cytochrome C transmembrane protein compare
SMc04092 -1.7 -2.5 hypothetical protein compare
SM_b21132 -1.7 -3.6 sulfate ABC transporter permease compare
SMc03878 -1.7 -2.9 acetoacetyl-CoA reductase compare
SMc03873 -1.7 -3.8 RNA polymerase factor sigma-32 compare
SMa0848 -1.7 -4.6 hypothetical protein compare
SMc02142 -1.7 -3.0 phosphate transporter ATP-binding protein compare
SMc01800 -1.6 -0.8 cytochrome C oxidase assembly transmembrane protein compare
SMc02909 -1.6 -1.5 transglycosylase transmembrane protein compare
SMa0211 -1.6 -1.3 hypothetical protein compare
SMc02544 -1.6 -1.1 hypothetical protein compare
SM_b20773 -1.6 -3.2 GntR family transcriptional regulator compare
SMc00760 -1.6 -3.9 recombinase A compare
SMc02561 -1.6 -2.8 hypothetical protein compare
SMc03900 -1.6 -10.2 cyclic beta-1,2-glucan ABc transporter compare
SMc02844 -1.6 -1.8 transcriptional regulator compare
SMc02361 -1.6 -4.0 cytochrome C-type biogenesis transmembrane protein compare
SMc02460 -1.5 -9.5 hypothetical protein compare
SMc03974 -1.5 -5.7 hypothetical protein compare
SMc00085 -1.5 -3.1 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMa5033 -1.5 -1.2 hypothetical protein compare
SM_b20307 -1.5 -1.1 dihydroxyacetone kinase compare
SMc00565 -1.5 -1.0 50S ribosomal protein L9 compare
SMc00067 -1.5 -5.2 outer-membranne lipoprotein compare
SMc00187 -1.5 -2.0 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00641 -1.5 -1.8 D-3-phosphoglycerate dehydrogenase compare
SMa0882 -1.5 -1.7 hypothetical protein compare
SMc04224 -1.5 -1.7 hypothetical protein compare
SMc03070 -1.5 -3.8 glucose-6-phosphate 1-dehydrogenase compare
SM_b21374 -1.4 -2.9 tagatose kinase (EC 2.7.1.101) (from data) compare
SMa1442 -1.4 -3.7 GntR family transcriptional regulator compare
SMc03127 -1.4 -1.2 ABC transporter permease compare
SMc01501 -1.4 -2.0 mannitol 2-dehydrogenase compare
SMc02677 -1.4 -5.9 pyrroline-5-carboxylate reductase compare
SMc01471 -1.4 -2.6 cytochrome C oxidase assembly factor transmembrane protein compare
SM_b20392 -1.4 -5.1 transcriptional regulator NanR compare
SM_b20314 -1.4 -4.6 glycerone kinase compare
SM_b20323 -1.3 -1.0 transcriptional regulator compare
SMc02850 -1.3 -1.5 DNA polymerase I compare
SMc03763 -1.3 -0.9 cytosine-specific methyltransferase compare
SMc02450 -1.3 -1.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
SMc00458 -1.3 -9.9 transcriptional regulator compare
SMc00998 -1.3 -6.8 signal peptide protein compare
SMc01260 -1.3 -3.8 transcriptional regulator compare
SMc01042 -1.3 -3.7 nitrogen regulation protein compare
SMc03850 -1.3 -0.6 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b20921 -1.3 -2.4 hypothetical protein compare
SMc02435 -1.3 -1.1 methyltransferase compare
SMc03949 -1.2 -2.8 nitrogen regulatory protein compare


Specific Phenotypes

For 9 genes in this experiment

For carbon source Potassium acetate in Sinorhizobium meliloti 1021

For carbon source Potassium acetate across organisms