Experiment set9IT072 for Sinorhizobium meliloti 1021

Compare to:

Potassium acetate carbon source

200 most important genes:

  gene name fitness t score description  
SMc00236 -7.8 -5.4 Indole-3-glycerol phosphate synthase compare
SMc01439 -7.4 -4.9 hypothetical protein compare
SMc02766 -6.8 -18.6 tryptophan synthase subunit beta compare
SMc02248 -6.7 -2.3 transcriptional regulator compare
SMc00235 -6.6 -6.5 anthranilate phosphoribosyltransferase compare
SMc00640 -6.4 -4.4 phosphoserine aminotransferase compare
SMc02245 -6.4 -4.4 dihydroorotate dehydrogenase 2 compare
SMc02838 -6.3 -6.9 phosphoglyceromutase compare
SMc00711 -6.3 -4.3 cyclohexadienyl dehydrogenase compare
SMc00918 -6.2 -6.1 ATP phosphoribosyltransferase regulatory subunit compare
SMa1635 -6.2 -2.2 hypothetical protein compare
SMc01726 -6.1 -5.1 acetylglutamate kinase compare
SMc02899 -6.1 -12.4 prephenate dehydratase compare
SMc02572 -6.1 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
SMc01028 -5.8 -14.1 phosphopyruvate hydratase compare
SMc03823 -5.8 -12.4 isopropylmalate isomerase large subunit compare
SMc02570 -5.7 -7.2 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00917 -5.7 -5.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02717 -5.6 -14.1 2-isopropylmalate synthase compare
SMc04405 -5.5 -5.8 3-isopropylmalate dehydrogenase compare
SMc02767 -5.5 -9.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00495 -5.3 -6.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01431 -5.2 -13.5 acetolactate synthase 3 catalytic subunit compare
SMc04045 -5.1 -10.2 dihydroxy-acid dehydratase compare
SMc02137 -5.1 -3.5 ornithine carbamoyltransferase compare
SMc02569 -5.1 -4.4 imidazole glycerol phosphate synthase subunit HisF compare
SM_b21176 -5.1 -4.9 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03979 -5.0 -3.4 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00131 -5.0 -15.9 transcriptional regulator compare
SMc02725 -5.0 -14.9 anthranilate synthase compare
SMc02765 -4.9 -11.9 tryptophan synthase subunit alpha compare
SMc00293 -4.9 -9.5 homoserine dehydrogenase compare
SMc03112 -4.9 -14.7 B12-dependent methionine synthase compare
SMc01494 -4.9 -8.2 phosphoserine phosphatase compare
SMc00025 -4.9 -8.7 pyruvate phosphate dikinase compare
SMc04093 -4.8 -19.2 acetyl-CoA synthetase conserved
SMc04028 -4.8 -18.6 glutamate synthase compare
SMc00092 -4.7 -10.8 phosphoadenosine phosphosulfate reductase compare
SMc02562 -4.7 -7.9 phosphoenolpyruvate carboxykinase compare
SMc01843 -4.6 -10.7 5,10-methylenetetrahydrofolate reductase compare
SMc00993 -4.6 -8.7 phosphoribosylamine--glycine ligase compare
SMc00294 -4.6 -13.3 aminotransferase compare
SMc04026 -4.6 -7.8 glutamate synthase compare
SMc02138 -4.6 -7.4 acetylornithine transaminase compare
SMc00412 -4.5 -4.4 orotidine 5'-phosphate decarboxylase compare
SMc04001 -4.5 -1.6 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01004 -4.5 -8.9 phosphoribosyl-AMP cyclohydrolase compare
SMc03777 -4.5 -8.0 gamma-glutamyl phosphate reductase compare
SMc00727 -4.4 -9.7 3-hydroxybutyryl-CoA dehydrogenase compare
SMc00090 -4.4 -9.1 sulfate adenylyltransferase compare
SMc03797 -4.4 -10.6 homoserine O-succinyltransferase compare
SMc00488 -4.4 -15.5 phosphoribosylformylglycinamidine synthase II compare
SMc00769 -4.4 -12.3 hypothetical protein compare
SMc03229 -4.4 -2.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc01801 -4.4 -3.4 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02165 -4.3 -5.9 orotate phosphoribosyltransferase compare
SMc02124 -4.3 -13.4 nitrite reductase compare
SM_b21174 -4.2 -5.4 phosphate uptake ABC transporter permease compare
SMc02217 -4.2 -5.7 O-succinylhomoserine sulfhydrylase compare
SMc00013 -4.1 -2.4 cytochrome C oxidase subunit III transmembrane protein compare
SMc02166 -4.1 -10.1 dihydroorotase compare
SMc00554 -4.1 -9.4 amidophosphoribosyltransferase compare
SMc00615 -4.0 -11.4 phosphoribosylaminoimidazole synthetase compare
SMc02249 -4.0 -16.1 sensory transduction histidine kinase transmembrane protein conserved
SMc02975 -4.0 -6.3 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SMc00768 -4.0 -7.3 isocitrate lyase conserved
SMc04088 -3.9 -8.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02308 -3.9 -5.2 hypothetical protein compare
SMc02123 -3.8 -4.5 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc01054 -3.8 -3.9 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00103 -3.6 -9.2 alpha-halocarboxylic acid dehalogenase compare
SMc03981 -3.6 -2.8 phosphoglycerate kinase compare
SMc04346 -3.6 -6.2 ketol-acid reductoisomerase compare
SMc04002 -3.6 -7.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01770 -3.6 -1.5 serine hydroxymethyltransferase compare
SMc00091 -3.5 -11.1 sulfate adenylyltransferase compare
SMc00017 -3.5 -1.6 homoserine kinase compare
SMc02307 -3.5 -7.4 histidinol dehydrogenase compare
SMc01360 -3.4 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc00614 -3.4 -8.1 phosphoribosylglycinamide formyltransferase compare
SMc03880 -3.4 -11.9 hypothetical protein compare
SMc01430 -3.3 -5.7 acetolactate synthase 3 regulatory subunit compare
SMc02753 -3.2 -1.1 PTS system transporter subunit IIA compare
SMc01053 -3.1 -4.6 siroheme synthase compare
SMc03776 -3.1 -3.5 gamma-glutamyl kinase compare
SMc02229 -3.1 -10.3 acyl-CoA dehydrogenase compare
SMc02246 -3.1 -1.1 hypothetical protein compare
SMc01220 -3.0 -4.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc03795 -3.0 -2.1 isopropylmalate isomerase small subunit compare
SMc02724 -3.0 -4.0 hypothetical protein compare
SMc01578 -3.0 -10.9 aspartate aminotransferase compare
SMc02581 -2.9 -9.3 malate synthase G compare
SMc00492 -2.9 -1.0 hypothetical protein compare
SMc00493 -2.8 -5.5 phosphoribosylformylglycinamidine synthase I compare
SMc02897 -2.8 -2.7 cytochrome C transmembrane protein compare
SM_b21177 -2.8 -6.7 phosphate uptake ABC transporter ATP-binding protein compare
SMc03974 -2.8 -5.5 hypothetical protein compare
SM_b21175 -2.8 -3.4 phosphate uptake ABC transporter permease compare
SMc01124 -2.7 -9.1 PII uridylyl-transferase compare
SMc01881 -2.7 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01454 -2.7 -8.9 hypothetical protein compare
SMc02755 -2.6 -6.3 S-adenosyl-L-homocysteine hydrolase compare
SMc00053 -2.6 -0.9 monovalent cation/H+ antiporter subunit C compare
SMc02478 -2.6 -11.1 hypothetical protein compare
SMc02707 -2.6 -3.9 hypothetical protein compare
SMc01939 -2.6 -1.7 urease subunit beta compare
SMc02844 -2.5 -2.1 transcriptional regulator compare
SM_b20758 -2.5 -2.9 ArsR family transcriptional regulator compare
SMc02450 -2.5 -2.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
SMc00513 -2.5 -7.2 amino acid-binding periplasmic protein compare
SMc02048 -2.4 -5.7 glycine cleavage system protein H compare
SMc00876 -2.4 -3.9 ATP-binding MRP protein compare
SMc00483 -2.4 -7.4 glutamate racemase compare
SMc00188 -2.3 -6.7 cytochrome B transmembrane protein compare
SMc02228 -2.3 -5.9 acetyl-CoA acetyltransferase compare
SMc00494 -2.3 -2.1 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00187 -2.3 -2.5 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMa1765 -2.3 -1.9 hypothetical protein compare
SMc00641 -2.3 -2.9 D-3-phosphoglycerate dehydrogenase compare
SMc00169 -2.3 -13.1 malic enzyme compare
SMc01852 -2.2 -7.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc00012 -2.2 -1.6 cytochrome C oxidase assembly protein compare
SMc02641 -2.2 -2.7 UDP-glucose 6-dehydrogenase compare
SMc03069 -2.2 -2.3 6-phosphogluconolactonase compare
SMc01361 -2.1 -2.8 dihydroorotase compare
SMc04005 -2.1 -7.7 pyruvate kinase compare
SM_b20312 -2.1 -7.0 dihydroxyacetone kinase compare
SMc02758 -2.1 -4.3 nucleotidyl transferase compare
SMc03978 -2.0 -1.4 transketolase compare
SMc02049 -2.0 -11.6 glycine dehydrogenase compare
SMc01043 -1.9 -9.1 nitrogen assimilation regulatory protein compare
SMc00522 -1.9 -10.2 ATP-dependent RNA helicase compare
SMc02172 -1.9 -7.2 transcriptional regulator compare
SMc02640 -1.9 -4.0 UDP-glucuronic acid epimerase compare
SMc02850 -1.9 -1.3 DNA polymerase I compare
SMc02227 -1.9 -4.6 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc00189 -1.9 -3.8 cytochrome C1 protein compare
SMc00334 -1.8 -1.0 cytidylate kinase compare
SMc00914 -1.8 -2.5 oxidoreductase compare
SMc00010 -1.8 -1.2 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02983 -1.8 -6.2 ornithine, DAP, or arginine decarboxylase compare
SMc02362 -1.8 -1.2 cytochrome c-type biogenesis protein CcmE compare
SMc03070 -1.8 -6.0 glucose-6-phosphate 1-dehydrogenase compare
SMc00761 -1.8 -6.8 oxidoreductase compare
SMc02071 -1.8 -2.9 hydrolase glycosidase compare
SMc02047 -1.7 -3.8 glycine cleavage system aminomethyltransferase T compare
SMc01495 -1.7 -3.8 transcriptional regulator compare
SMa1365 -1.7 -1.1 ATP-binding protein compare
SMc03835 -1.7 -3.5 2'-5' RNA ligase compare
SMc00565 -1.7 -1.4 50S ribosomal protein L9 compare
SMc00355 -1.7 -3.3 hypothetical protein compare
SMc02894 -1.7 -1.7 hypothetical protein compare
SMc01206 -1.6 -1.2 queuine tRNA-ribosyltransferase compare
SMc02827 -1.6 -3.0 hypothetical protein compare
SMc01800 -1.6 -0.7 cytochrome C oxidase assembly transmembrane protein compare
SMc01042 -1.6 -4.7 nitrogen regulation protein compare
SMc02460 -1.6 -8.2 hypothetical protein compare
SMa2289 -1.6 -1.4 hypothetical protein compare
SMc01768 -1.6 -3.5 transcriptional regulator compare
SMc02677 -1.6 -4.6 pyrroline-5-carboxylate reductase compare
SMc00427 -1.5 -1.4 peptide chain release factor RF-3 protein compare
SMc01880 -1.5 -1.9 pantoate--beta-alanine ligase compare
SMc00302 -1.5 -1.3 hypothetical protein compare
SMc02121 -1.5 -1.5 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02561 -1.5 -2.3 hypothetical protein compare
SMc02077 -1.5 -2.3 exodeoxyribonuclease III protein compare
SMc01613 -1.5 -3.9 ribose-5-phosphate isomerase B compare
SMc01842 -1.5 -2.2 methyltransferase transcription regulator protein compare
SM_b20307 -1.5 -1.1 dihydroxyacetone kinase compare
SMc03878 -1.5 -1.8 acetoacetyl-CoA reductase compare
SMc03943 -1.4 -4.4 hypothetical protein compare
SMc04043 -1.4 -4.7 hypothetical protein compare
SM_b21598 -1.4 -4.9 transcriptional regulator compare
SMc00450 -1.4 -1.3 protoheme IX farnesyltransferase compare
SMc03091 -1.4 -3.2 arginase compare
SM_b20313 -1.4 -4.6 glycerone kinase compare
SMc00451 -1.4 -4.0 processing protease compare
SMc02582 -1.4 -2.3 hypothetical protein compare
SMc00295 -1.4 -1.1 hypothetical protein compare
SMc00760 -1.4 -3.1 recombinase A compare
SMc01929 -1.4 -1.5 hypothetical protein compare
SM_b20942 -1.4 -4.4 UDP glucose 4-epimerase compare
SMc02141 -1.3 -0.9 phosphate transporter PhoU compare
SMc03949 -1.3 -3.6 nitrogen regulatory protein compare
SMc03993 -1.3 -3.7 hypothetical protein compare
SMc01041 -1.3 -2.8 NIFR3-like protein compare
SMc02361 -1.3 -3.0 cytochrome C-type biogenesis transmembrane protein compare
SMc03900 -1.3 -9.9 cyclic beta-1,2-glucan ABc transporter compare
SMc02783 -1.3 -2.8 hypothetical protein compare
SMc00009 -1.3 -4.0 cytochrome C oxidase subunit II protein compare
SMc00556 -1.3 -3.6 DNA repair protein RadA compare
SMc02574 -1.3 -2.3 imidazoleglycerol-phosphate dehydratase compare
SMc03763 -1.3 -0.8 cytosine-specific methyltransferase compare
SM_b21133 -1.2 -5.9 sulfate ABC transporter substrate-binding protein compare
SMc00600 -1.2 -2.4 molybdopterin MPT converting factor subunit 1 compare
SMc00762 -1.2 -6.0 glutamine synthetase compare
SMc03279 -1.2 -1.9 transposase number 2 for insertion sequence ISRM28 compare
SMc02785 -1.2 -4.5 lytic murein transglycosylase A protein compare
SMc01502 -1.2 -4.1 hydrolase phosphatase compare
SMc04260 -1.2 -6.3 transcriptional regulator compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source Potassium acetate in Sinorhizobium meliloti 1021

For carbon source Potassium acetate across organisms