Experiment set9IT071 for Sinorhizobium meliloti 1021

Compare to:

L-Lysine carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc03140 +3.4 15.3 transcriptional regulator compare
SMc02084 +1.9 2.1 biopolymer transport transmembrane protein compare
SMa0496 +1.4 10.6 hypothetical protein compare
SMc00794 +1.4 9.6 two-component response regulator compare
SMc00492 +1.4 1.3 hypothetical protein compare
SMc02693 +1.3 2.7 peptidyl-tRNA hydrolase compare
SMc01506 +1.3 8.8 RNA polymerase sigma factor compare
SMc00239 +1.2 1.7 hypothetical protein compare
SMc01504 +1.2 7.4 two-component response regulator compare
SMc00167 +1.2 7.6 signal peptide protein compare
SMa0748 +1.2 2.5 MucR family transcriptional regulator compare
SMc00856 +1.2 1.8 hypothetical protein compare
SMc04242 +1.1 2.3 zinc uptake regulation protein compare
SMc02261 +1.1 4.4 transcriptional regulator compare
SMa0753 +1.1 1.1 hypothetical protein compare
SMc01471 +1.0 2.6 cytochrome C oxidase assembly factor transmembrane protein compare
SMc02906 +1.0 1.3 hypothetical protein compare
SMc02718 +1.0 1.3 hypothetical protein compare
SM_b21084 +1.0 2.5 hypothetical protein compare
SMc02449 +0.9 2.2 acetyltransferase compare
SMa1759 +0.9 3.7 GntR family transcriptional regulator compare
SMc00334 +0.9 1.1 cytidylate kinase compare
SMa1153 +0.9 2.9 hypothetical protein compare
SMc00681 +0.9 5.5 leucine-responsive regulatory protein compare
SMc04008 +0.9 1.9 hypothetical protein compare
SMa5031 +0.9 2.4 hypothetical protein compare
SMa5011 +0.8 2.8 oxidoreductase compare
SMa0113 +0.8 7.5 Sensor histidine kinase compare
SMc04319 +0.8 1.8 hypothetical protein compare
SMc00854 +0.8 1.2 hypothetical protein compare
SM_b20547 +0.8 2.2 hypothetical protein compare
SMc02145 +0.8 0.8 signal peptide protein compare
SMc00682 +0.8 2.8 hippurate hydrolase compare
SMa0647 +0.8 2.4 hypothetical protein compare
SMa1240 +0.8 1.2 NapF ferredoxin component of periplasmic nitrate reductase compare
SMc03774 +0.8 2.8 hypothetical protein compare
SMc00006 +0.8 2.0 hypothetical protein compare
SMc02247 +0.8 1.2 signal peptide protein compare
SM_b20563 +0.8 2.7 hypothetical protein compare
SMa1973 +0.8 3.2 hypothetical protein compare
SM_b20897 +0.8 1.5 hypothetical protein compare
SMc03850 +0.8 0.7 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b20261 +0.8 3.2 malate dehydrogenase compare
SMc01144 +0.8 3.0 ribonuclease PH compare
SM_b21678 +0.8 1.9 hypothetical protein compare
SMc02306 +0.8 1.3 hypothetical protein compare
SMa0740 +0.8 2.0 hypothetical protein compare
SMa1161 +0.7 2.4 hypothetical protein compare
SMc00712 +0.7 1.2 hypothetical protein compare
SMc00589 +0.7 3.0 hypothetical protein compare
SM_b20862 +0.7 1.8 hypothetical protein compare
SM_b20021 +0.7 1.0 transcriptional regulator compare
SMc00352 +0.7 1.5 acetyltransferase compare
SMc04866 +0.7 1.7 hypothetical protein compare
SMc01595 +0.7 2.3 sensor histidine kinase transmembrane protein compare
SMc00029 +0.7 1.8 hypothetical protein compare
SMa0518 +0.7 2.3 hypothetical protein compare
SM_b21159 +0.7 1.3 short-chain dehydrogenase compare
SM_b20549 +0.6 2.4 hypothetical protein compare
SM_b21294 +0.6 3.4 Hsp20 family heat-shock protein compare
SMc04436 +0.6 2.4 hypothetical protein compare
SMc00801 +0.6 3.0 hypothetical protein compare
SMc02897 +0.6 1.0 cytochrome C transmembrane protein compare
SMa1099 +0.6 2.5 CycB1 cytochrome c-552 precursor compare
SMc01447 +0.6 0.9 hypothetical protein compare
SMc03184 +0.6 0.8 PH adaptation potassium efflux system G transmembrane protein compare
SM_b21633 +0.6 0.9 enoyl-CoA hydratase compare
SMc02647 +0.6 1.4 transcriptional regulator compare
SMc01089 +0.6 1.0 hypothetical protein compare
SMc01275 +0.6 3.3 ribosomal large subunit pseudouridine synthase C protein compare
SMa1960 +0.6 1.7 hypothetical protein compare
SMc00347 +0.6 1.2 nucleoside diphosphate kinase regulator compare
SMc00241 +0.6 1.8 transcriptional regulator compare
SMc02149 +0.6 0.9 hypothetical protein compare
SMc01428 +0.6 1.1 cold shock transcription regulator protein compare
SMa1232 +0.6 2.6 NapC membrane-bound tetraheme cytochrome c subunit compare
SM_b21170 +0.6 1.9 guanylate kinase compare
SMc00691 +0.6 1.4 site-specific tyrosine recombinase XerD compare
SMa1201 +0.6 1.6 hypothetical protein compare
SMc01160 +0.6 1.6 hypothetical protein compare
SMa1093 +0.6 2.5 hypothetical protein compare
SMa1160 +0.6 2.8 hypothetical protein compare
SMa5003 +0.6 2.6 hypothetical protein compare
SMc00820 +0.6 2.9 transcriptional regulator compare
SMc04456 +0.6 1.9 chaperone protein compare
SMa1149 +0.6 1.7 hypothetical protein compare
SMc02495 +0.6 0.8 translaldolase compare
SMc01262 +0.6 2.3 peptide deformylase compare
SMa0674 +0.6 1.1 hypothetical protein compare
SMa0838 +0.6 1.7 SyrA protein involved in EPS production compare
SMc04327 +0.6 0.6 hypothetical protein compare
SMa1780 +0.6 2.4 hypothetical protein compare
SMc01989 +0.6 2.5 hypothetical protein compare
SMc02866 +0.6 1.5 transcriptional regulator compare
SMc02827 +0.6 1.9 hypothetical protein compare
SMa0312 +0.6 2.0 hypothetical protein compare
SMc02859 +0.6 1.9 hypothetical protein compare
SMc00689 +0.6 2.2 lipoprotein compare
SMa2251 +0.6 1.7 hypothetical protein compare
SMa0114 +0.6 3.9 two-component response regulator compare
SMc02381 +0.5 1.3 hypothetical protein compare
SMc02071 +0.5 1.8 hydrolase glycosidase compare
SMa2219 +0.5 2.4 decarboxylase compare
SM_b21096 +0.5 0.8 amino acid transporter ABC transporter ATP-binding protein compare
SMa1063 +0.5 1.5 hypothetical protein compare
SMa0878 +0.5 1.7 glucosamine--fructose-6-phosphate aminotransferase compare
SMc02739 +0.5 1.2 glycine betaine transport ATP-binding ABC transporter protein compare
SMc04439 +0.5 1.6 glycine betaine transport ATP-binding ABC transporter protein compare
SMc01153 +0.5 0.8 enoyl-CoA hydratase compare
SMc01577 +0.5 1.1 hypothetical protein compare
SMa0081 +0.5 2.6 ABC transporter permease compare
SMc00496 +0.5 0.8 hypothetical protein compare
SMc01023 +0.5 2.2 triosephosphate isomerase compare
SMa1570 +0.5 0.8 PilA2 pilus assembly protein compare
SMa1200 +0.5 2.5 hypothetical protein compare
SM_b21679 +0.5 0.6 hypothetical protein compare
SMc00038 +0.5 0.9 hypothetical protein compare
SMc00588 +0.5 0.7 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SM_b20761 +0.5 2.9 carbon-phosphorus lyase compare
SM_b20690 +0.5 1.3 hypothetical protein compare
SMa1096 +0.5 2.9 hypothetical protein compare
SM_b20455 +0.5 2.8 transcriptional regulator compare
SMa0841 +0.5 1.6 transposase, fragment compare
SM_b21255 +0.5 2.5 hypothetical protein compare
SMa0543 +0.5 1.1 hypothetical protein compare
SMc01364 +0.5 0.7 DNA topoisomerase I compare
SMc01127 +0.5 1.7 hypothetical protein compare
SM_b21479 +0.5 1.2 hypothetical protein compare
SMa0736 +0.5 1.4 hypothetical protein compare
SMc02379 +0.5 2.6 permease compare
SMc00853 +0.5 1.8 hypothetical protein compare
SM_b21569 +0.5 1.2 transcriptional regulator compare
SMc02271 +0.5 3.5 ribitol type dehydrogenase compare
SMa0489 +0.5 2.2 ABC transporter ATP-binding protein compare
SMc03008 +0.5 0.7 chemotaxis protein compare
SMa0640 +0.5 2.2 hypothetical protein compare
SMc01796 +0.5 2.8 hypothetical protein compare
SMc03210 +0.5 0.9 transcriptional regulator compare
SMa1002 +0.5 0.8 hypothetical protein compare
SM_b20280 +0.5 1.9 hypothetical protein compare
SMc02593 +0.5 1.9 hypothetical protein compare
SMc01765 +0.5 0.7 hypothetical protein compare
SMc01178 +0.5 0.7 multidrug transmembrane resistance signal peptide protein compare
SMa1597 +0.5 1.4 Pilus assembly chaperone compare
SM_b20055 +0.5 0.9 transcriptional regulator compare
SMc02272 +0.5 3.8 acyl-transferase transferase compare
SMc01717 +0.5 1.8 mercuric reductase compare
SMc00340 +0.5 1.5 oxidoreductase compare
SMc00247 +0.5 2.8 phosphatidylcholine synthase compare
SMc01197 +0.5 2.2 hypothetical protein compare
SMc05015 +0.5 1.2 recombinase compare
SMc03889 +0.5 1.5 transporter compare
SMa1210 +0.5 1.8 nitrogen fixation protein FixH compare
SMc00516 +0.5 2.6 hypothetical protein compare
SMc03236 +0.5 1.4 glutamine amidotransferase compare
SMa1207 +0.5 1.8 Crp family transcriptional regulator compare
SMc00044 +0.5 1.9 amino acid efflux protein compare
SM_b20616 +0.5 1.1 thiamine biosynthesis oxidoreductase compare
SM_b21025 +0.5 2.4 hypothetical protein compare
SMc01015 +0.5 1.3 hypothetical protein compare
SMc01643 +0.5 2.3 ABC transporter permease compare
SMc01330 +0.5 1.5 transcriptional regulator compare
SMa1323 +0.5 1.2 Transcription regulator compare
SMc01834 +0.5 2.5 hypothetical protein compare
SM_b20666 +0.5 2.3 aldolase compare
SM_b20050 +0.5 0.8 hypothetical protein compare
SMc03843 +0.5 2.1 transcriptional regulator compare
SMa1630 +0.4 0.4 hypothetical protein compare
SM_b21577 +0.4 1.4 hypothetical protein compare
SMc01186 +0.4 1.1 hypothetical protein compare
SMc00665 +0.4 1.2 hypothetical protein compare
SMc00134 +0.4 2.2 hypothetical protein compare
SMc00395 +0.4 2.4 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase compare
SMc04344 +0.4 1.2 signal peptide protein compare
SM_b20419 +0.4 2.4 glycerol-3-phosphate ABC transporter ATP-binding protein compare
SMa1156 +0.4 2.1 alcohol dehydrogenase compare
SMa1465 +0.4 1.7 ABC transporter permease compare
SMc02323 +0.4 2.1 transcriptional regulator compare
SMc00045 +0.4 1.2 cytochrome C signal peptide protein compare
SMa5010 +0.4 0.8 hypothetical protein compare
SMc02893 +0.4 1.8 transcriptional regulator compare
SMc01143 +0.4 2.1 heat-inducible transcription repressor compare
SMa1995 +0.4 2.2 ABC transporter permease compare
SMc01464 +0.4 1.4 hypothetical protein compare
SM_b21087 +0.4 1.3 conjugal transfer protein compare
SM_b21192 +0.4 3.0 fructose-1,6-bisphosphate aldolase compare
SMc00560 +0.4 1.3 hypothetical protein compare
SM_b20806 +0.4 1.8 hypothetical protein compare
SMc02273 +0.4 4.0 fatty acid synthase transmembrane protein compare
SMc04435 +0.4 3.1 hypothetical protein compare
SMc01418 +0.4 1.5 signal peptide protein compare
SMc00739 +0.4 2.0 hypothetical protein compare
SMa0160 +0.4 2.2 GntR family transcriptional regulator compare
SMc01346 +0.4 1.8 leucyl/phenylalanyl-tRNA--protein transferase compare
SMc00976 +0.4 1.3 enoyl-CoA hydratase compare
SMa1111 +0.4 1.2 hypothetical protein compare
SMc02286 +0.4 1.9 hypothetical protein compare
SMa1840 +0.4 1.8 hypothetical protein compare
SMa1136 +0.4 1.0 hypothetical protein compare
SMa1198 +0.4 1.6 copper export protein compare


Specific Phenotypes

For 20 genes in this experiment

For carbon source L-Lysine in Sinorhizobium meliloti 1021

For carbon source L-Lysine across organisms