Experiment set9IT070 for Ralstonia sp. UNC404CL21Col

Compare to:

Heptanoic acid carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS00205 -6.6 -4.5 DUF934 domain-containing protein compare
ABZR87_RS16080 -6.6 -4.0 P-II family nitrogen regulator compare
ABZR87_RS16735 -6.2 -17.3 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
ABZR87_RS20875 -6.1 -4.2 LysR family transcriptional regulator compare
ABZR87_RS14535 -6.1 -4.2 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS16660 -6.1 -4.2 helix-turn-helix domain-containing protein compare
ABZR87_RS14950 -6.1 -4.2 acetolactate synthase small subunit compare
ABZR87_RS07360 -6.1 -9.3 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS16730 -6.0 -4.2 2-methylaconitate cis-trans isomerase PrpF compare
ABZR87_RS13250 -6.0 -4.1 phosphoserine phosphatase SerB compare
ABZR87_RS00200 -5.8 -4.0 phosphoadenylyl-sulfate reductase compare
ABZR87_RS02155 -5.8 -6.9 anthranilate phosphoribosyltransferase compare
ABZR87_RS16140 -5.8 -10.4 phosphoenolpyruvate carboxylase compare
ABZR87_RS02565 -5.8 -4.0 glutamate synthase subunit beta compare
ABZR87_RS22970 -5.7 -10.2 cystathionine gamma-synthase family protein compare
ABZR87_RS21795 -5.6 -7.7 NUDIX domain-containing protein compare
ABZR87_RS02640 -5.6 -15.3 diaminopimelate decarboxylase compare
ABZR87_RS08630 -5.6 -5.4 dihydroorotase compare
ABZR87_RS05200 -5.5 -16.3 homoserine O-acetyltransferase compare
ABZR87_RS14540 -5.5 -5.4 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS14500 -5.5 -12.2 tryptophan synthase subunit beta compare
ABZR87_RS11440 -5.5 -3.8 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS17145 -5.4 -14.1 AMP nucleosidase compare
ABZR87_RS01110 -5.4 -7.5 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS17310 -5.4 -7.4 PadR family transcriptional regulator compare
ABZR87_RS02655 -5.4 -9.7 anti-sigma factor compare
ABZR87_RS09445 -5.3 -8.9 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS02570 -5.3 -20.2 glutamate synthase-related protein compare
ABZR87_RS14530 -5.3 -5.2 3-isopropylmalate dehydrogenase compare
ABZR87_RS02020 -5.3 -11.8 long-chain fatty acid--CoA ligase compare
ABZR87_RS14505 -5.3 -5.1 phosphoribosylanthranilate isomerase compare
ABZR87_RS14490 -5.2 -6.2 tryptophan synthase subunit alpha compare
ABZR87_RS13790 -5.2 -6.2 chorismate synthase compare
ABZR87_RS11925 -5.1 -11.0 phosphoenolpyruvate synthase compare
ABZR87_RS00190 -5.1 -10.4 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS13285 -5.1 -11.5 polyhydroxyalkanoate synthesis repressor PhaR compare
ABZR87_RS07060 -5.1 -14.8 RNA polymerase factor sigma-54 compare
ABZR87_RS00220 -5.1 -14.4 CysB family HTH-type transcriptional regulator compare
ABZR87_RS16740 -5.1 -7.0 2-methylcitrate synthase compare
ABZR87_RS01645 -5.1 -6.0 type II 3-dehydroquinate dehydratase compare
ABZR87_RS02160 -5.0 -6.0 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS14380 -5.0 -8.3 glutamate racemase compare
ABZR87_RS09465 -5.0 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS20880 -5.0 -8.9 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS02140 -4.9 -17.6 anthranilate synthase component I compare
ABZR87_RS06845 -4.9 -8.2 heme o synthase compare
ABZR87_RS14115 -4.8 -3.3 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS02535 -4.7 -5.6 phospholipid-binding protein MlaC compare
ABZR87_RS02145 -4.7 -3.2 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS04975 -4.7 -3.2 peptide deformylase compare
ABZR87_RS11245 -4.6 -7.6 translational GTPase TypA compare
ABZR87_RS06770 -4.6 -7.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS05305 -4.5 -13.4 TetR family transcriptional regulator compare
ABZR87_RS16745 -4.5 -9.7 methylisocitrate lyase compare
ABZR87_RS05100 -4.5 -6.8 RNA polymerase-binding protein DksA compare
ABZR87_RS06810 -4.5 -9.5 cytochrome c oxidase assembly protein compare
ABZR87_RS02545 -4.4 -8.5 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR87_RS02595 -4.4 -10.0 shikimate kinase compare
ABZR87_RS16170 -4.4 -5.2 argininosuccinate lyase compare
ABZR87_RS04785 -4.4 -9.0 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS07380 -4.4 -11.3 FAD/FMN-binding oxidoreductase compare
ABZR87_RS04125 -4.3 -5.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS00350 -4.3 -6.2 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS02375 -4.3 -13.9 cytochrome c1 compare
ABZR87_RS00195 -4.3 -5.4 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS10170 -4.2 -5.0 RseA family anti-sigma factor compare
ABZR87_RS02590 -4.2 -10.2 3-dehydroquinate synthase compare
ABZR87_RS02540 -4.2 -6.4 VacJ family lipoprotein compare
ABZR87_RS08660 -4.2 -7.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS05350 -4.2 -6.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS05635 -4.2 -21.0 muropeptide transporter compare
ABZR87_RS11195 -4.2 -13.3 pseudouridine synthase compare
ABZR87_RS09710 -4.2 -4.9 tRNA-Arg compare
ABZR87_RS05170 -4.2 -2.9 acetylglutamate kinase compare
ABZR87_RS06800 -4.2 -19.1 cytochrome c oxidase subunit I compare
ABZR87_RS02555 -4.1 -8.8 ABC transporter ATP-binding protein compare
ABZR87_RS02445 -4.1 -6.3 Sec-independent protein translocase protein TatB compare
ABZR87_RS00355 -4.1 -13.0 quinolinate synthase NadA compare
ABZR87_RS02440 -4.1 -9.1 twin-arginine translocase subunit TatC compare
ABZR87_RS00210 -4.1 -10.7 nitrite/sulfite reductase compare
ABZR87_RS00435 -4.1 -7.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS02380 -4.0 -15.4 cytochrome bc complex cytochrome b subunit compare
ABZR87_RS14955 -4.0 -3.9 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS00185 -4.0 -3.8 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS01615 -3.9 -1.6 RNB domain-containing ribonuclease compare
ABZR87_RS10565 -3.9 -2.7 cupin domain-containing protein compare
ABZR87_RS06710 -3.9 -17.9 glutathione synthase compare
ABZR87_RS06705 -3.9 -13.7 glutamate--cysteine ligase compare
ABZR87_RS01810 -3.9 -4.4 glutamate 5-kinase compare
ABZR87_RS02630 -3.9 -2.7 iron donor protein CyaY compare
ABZR87_RS11390 -3.9 -14.2 PhoH family protein compare
ABZR87_RS00875 -3.9 -5.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS00835 -3.8 -6.8 argininosuccinate synthase compare
ABZR87_RS06400 -3.8 -8.1 response regulator transcription factor compare
ABZR87_RS06840 -3.7 -9.0 COX15/CtaA family protein compare
ABZR87_RS04865 -3.7 -4.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS11940 -3.7 -4.6 SsrA-binding protein SmpB compare
ABZR87_RS01035 -3.7 -6.2 histidine utilization repressor compare
ABZR87_RS11010 -3.7 -3.5 oxidative damage protection protein compare
ABZR87_RS00285 -3.6 -3.5 acetylornithine transaminase compare
ABZR87_RS09935 -3.6 -4.2 amino acid aminotransferase compare
ABZR87_RS02680 -3.6 -12.2 c-type cytochrome compare
ABZR87_RS11435 -3.5 -5.3 Mth938-like domain-containing protein compare
ABZR87_RS11815 -3.5 -11.7 [protein-PII] uridylyltransferase compare
ABZR87_RS10120 -3.5 -2.6 YceD family protein compare
ABZR87_RS14510 -3.5 -6.1 tRNA pseudouridine(38-40) synthase TruA compare
ABZR87_RS15440 -3.4 -2.4 ribonuclease G compare
ABZR87_RS00325 -3.4 -2.3 peptidylprolyl isomerase compare
ABZR87_RS02385 -3.4 -5.6 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS03420 -3.4 -1.2 type II secretion system minor pseudopilin GspI compare
ABZR87_RS02550 -3.4 -7.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR87_RS19010 -3.4 -3.9 acyloxyacyl hydrolase compare
ABZR87_RS16960 -3.4 -4.0 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS06385 -3.4 -11.4 CHASE3 domain-containing protein compare
ABZR87_RS00345 -3.4 -13.4 L-aspartate oxidase compare
ABZR87_RS15685 -3.3 -7.7 TIGR00730 family Rossman fold protein compare
ABZR87_RS09700 -3.3 -6.1 DEAD/DEAH box helicase compare
ABZR87_RS05000 -3.3 -14.9 LysR family transcriptional regulator compare
ABZR87_RS06950 -3.3 -11.0 pitrilysin family protein compare
ABZR87_RS01640 -3.3 -4.1 TlpA disulfide reductase family protein compare
ABZR87_RS09635 -3.3 -2.2 ribosome small subunit-dependent GTPase A compare
ABZR87_RS10175 -3.3 -6.5 MucB/RseB C-terminal domain-containing protein compare
ABZR87_RS13300 -3.2 -10.6 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS08625 -3.2 -2.2 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS10240 -3.2 -2.2 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS11125 -3.2 -7.0 cell division protein ZapE compare
ABZR87_RS21285 -3.1 -2.6 TetR/AcrR family transcriptional regulator compare
ABZR87_RS06795 -3.1 -12.5 cytochrome c oxidase subunit II compare
ABZR87_RS02480 -3.1 -2.1 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS10780 -3.1 -7.3 PD-(D/E)XK nuclease family protein compare
ABZR87_RS01745 -3.1 -4.5 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
ABZR87_RS09450 -3.1 -7.5 prephenate dehydratase compare
ABZR87_RS04940 -3.0 -2.9 PAS domain-containing sensor histidine kinase compare
ABZR87_RS15405 -3.0 -3.0 YebC/PmpR family DNA-binding transcriptional regulator compare
ABZR87_RS12345 -2.9 -1.5 dethiobiotin synthase compare
ABZR87_RS13445 -2.9 -6.8 phasin family protein compare
ABZR87_RS00215 -2.9 -4.9 sulfite exporter TauE/SafE family protein compare
ABZR87_RS06495 -2.9 -2.0 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS10610 -2.8 -2.7 inositol monophosphatase family protein compare
ABZR87_RS01675 -2.8 -1.9 carbohydrate kinase family protein compare
ABZR87_RS07700 -2.8 -1.9 peptidylprolyl isomerase compare
ABZR87_RS18910 -2.8 -1.9 DUF2239 family protein compare
ABZR87_RS16180 -2.8 -6.3 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS09615 -2.8 -1.6 50S ribosomal protein L19 compare
ABZR87_RS16250 -2.8 -4.1 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS10400 -2.7 -4.5 hypothetical protein compare
ABZR87_RS04295 -2.7 -3.3 HU family DNA-binding protein compare
ABZR87_RS05060 -2.7 -5.2 DUF484 family protein compare
ABZR87_RS08110 -2.7 -8.5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
ABZR87_RS06645 -2.7 -2.6 TlpA disulfide reductase family protein compare
ABZR87_RS09895 -2.7 -2.1 DUF1841 family protein compare
ABZR87_RS08655 -2.6 -4.3 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS17315 -2.6 -5.4 MarR family transcriptional regulator compare
ABZR87_RS02150 -2.6 -2.6 lysozyme inhibitor LprI family protein compare
ABZR87_RS12790 -2.6 -4.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS06820 -2.6 -6.9 cytochrome c oxidase subunit 3 compare
ABZR87_RS07050 -2.6 -1.5 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS00605 -2.5 -7.7 hypothetical protein compare
ABZR87_RS04945 -2.5 -3.4 DUF4390 domain-containing protein compare
ABZR87_RS11230 -2.5 -8.7 HlyD family secretion protein compare
ABZR87_RS01980 -2.5 -2.5 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS08680 -2.5 -8.8 glycosyltransferase compare
ABZR87_RS10980 -2.5 -1.1 tRNA-Leu compare
ABZR87_RS11625 -2.5 -9.8 malate synthase A compare
ABZR87_RS17650 -2.4 -7.8 TetR/AcrR family transcriptional regulator compare
ABZR87_RS16185 -2.4 -3.1 dCTP deaminase compare
ABZR87_RS06745 -2.4 -5.5 S41 family peptidase compare
ABZR87_RS11235 -2.4 -8.1 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor compare
ABZR87_RS08775 -2.3 -9.2 protein-L-isoaspartate O-methyltransferase compare
ABZR87_RS12785 -2.3 -3.2 endopeptidase La compare
ABZR87_RS07035 -2.3 -8.0 RNase adapter RapZ compare
ABZR87_RS06835 -2.3 -6.6 cytochrome c oxidase subunit I compare
ABZR87_RS00935 -2.3 -9.5 polynucleotide adenylyltransferase PcnB compare
ABZR87_RS15605 -2.3 -2.6 hypothetical protein compare
ABZR87_RS09200 -2.3 -14.3 long-chain fatty acid--CoA ligase compare
ABZR87_RS11015 -2.3 -5.0 amino-acid N-acetyltransferase compare
ABZR87_RS16270 -2.2 -2.1 cold-shock protein compare
ABZR87_RS03565 -2.2 -7.1 TetR/AcrR family transcriptional regulator compare
ABZR87_RS10870 -2.2 -6.9 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR87_RS10800 -2.2 -4.1 YbaB/EbfC family nucleoid-associated protein compare
ABZR87_RS12795 -2.2 -5.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS06715 -2.2 -3.2 PTS sugar transporter subunit IIA compare
ABZR87_RS14375 -2.2 -3.5 fumarate hydratase compare
ABZR87_RS05590 -2.2 -2.9 orotate phosphoribosyltransferase compare
ABZR87_RS19035 -2.1 -3.8 response regulator compare
ABZR87_RS16125 -2.1 -4.9 heme biosynthesis protein HemY compare
ABZR87_RS14495 -2.1 -4.7 site-specific DNA-methyltransferase compare
ABZR87_RS04995 -2.1 -2.8 DNA topoisomerase III compare
ABZR87_RS04190 -2.1 -1.5 hypothetical protein compare
ABZR87_RS08650 -2.1 -11.8 dTDP-4-dehydrorhamnose reductase compare
ABZR87_RS04880 -2.1 -8.6 5-formyltetrahydrofolate cyclo-ligase compare
ABZR87_RS16750 -2.1 -5.9 propionate catabolism operon regulatory protein PrpR compare
ABZR87_RS07005 -2.1 -3.4 lipoprotein insertase outer membrane protein LolB compare
ABZR87_RS10785 -2.0 -6.3 exodeoxyribonuclease V subunit beta compare
ABZR87_RS01055 -2.0 -7.3 heat-inducible transcriptional repressor HrcA compare
ABZR87_RS11240 -2.0 -4.8 MarR family transcriptional regulator compare
ABZR87_RS06955 -2.0 -8.9 pitrilysin family protein compare
ABZR87_RS00280 -2.0 -8.2 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
ABZR87_RS02235 -2.0 -5.4 response regulator compare
ABZR87_RS02575 -1.9 -6.8 transposase compare


Specific Phenotypes

For 17 genes in this experiment

For carbon source Heptanoic acid in Ralstonia sp. UNC404CL21Col

For carbon source Heptanoic acid across organisms