Experiment set9IT070 for Paraburkholderia graminis OAS925

Compare to:

R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM

200 most important genes:

  gene name fitness t score description  
ABIE53_003525 -4.8 -16.1 LPS-assembly lipoprotein compare
ABIE53_000423 -4.6 -3.1 DnaK suppressor protein compare
ABIE53_003017 -4.6 -7.6 trehalose 6-phosphate phosphatase compare
ABIE53_000885 -4.5 -8.6 biopolymer transport protein TolQ compare
ABIE53_003712 -4.5 -7.5 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein compare
ABIE53_003160 -4.4 -4.3 hypothetical protein compare
ABIE53_000883 -4.4 -2.4 colicin import membrane protein compare
ABIE53_003710 -4.3 -7.3 phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein compare
ABIE53_002494 -4.3 -3.0 outer membrane protein compare
ABIE53_003711 -4.2 -5.7 phospholipid/cholesterol/gamma-HCH transport system permease protein compare
ABIE53_003708 -4.1 -7.4 phospholipid transport system substrate-binding protein compare
ABIE53_004645 -4.1 -3.9 hopanoid-associated phosphorylase compare
ABIE53_000453 -4.0 -1.6 hypothetical protein compare
ABIE53_003752 -4.0 -1.6 cytochrome c-type biogenesis protein CcsB compare
ABIE53_000798 -4.0 -2.7 peptidyl-prolyl cis-trans isomerase SurA compare
ABIE53_004106 -3.9 -9.2 multidrug efflux pump compare
ABIE53_001772 -3.9 -1.6 succinylglutamic semialdehyde dehydrogenase compare
ABIE53_003186 -3.8 -3.7 disulfide bond formation protein DsbB compare
ABIE53_004105 -3.7 -7.0 multidrug efflux system outer membrane protein compare
ABIE53_004646 -3.6 -10.2 squalene-hopene/tetraprenyl-beta-curcumene cyclase compare
ABIE53_001554 -3.5 -3.4 K+-transporting ATPase ATPase B chain compare
ABIE53_003707 -3.4 -4.5 phospholipid transport system transporter-binding protein compare
ABIE53_004858 -3.4 -2.4 farnesyl diphosphate synthase compare
ABIE53_004641 -3.4 -7.3 hopanoid biosynthesis associated radical SAM protein HpnH compare
ABIE53_002857 -3.3 -8.7 phosphomethylpyrimidine synthase compare
ABIE53_001667 -3.2 -4.3 hypothetical protein compare
ABIE53_004648 -3.2 -3.7 squalene synthase HpnD compare
ABIE53_004658 -3.2 -2.8 hypothetical protein compare
ABIE53_003517 -3.1 -3.0 phosphogluconate dehydratase compare
ABIE53_003565 -3.1 -3.6 thiol-disulfide isomerase/thioredoxin compare
ABIE53_000598 -3.0 -3.6 thiol:disulfide interchange protein DsbA compare
ABIE53_004107 -3.0 -2.9 multidrug efflux system membrane fusion protein compare
ABIE53_003531 -3.0 -2.8 Fur family ferric uptake transcriptional regulator compare
ABIE53_002546 -2.9 -2.0 cell wall-associated NlpC family hydrolase compare
ABIE53_005596 -2.9 -4.0 DNA-binding IclR family transcriptional regulator compare
ABIE53_004306 -2.9 -8.6 phosphatidylglycerophosphate synthase compare
ABIE53_000884 -2.9 -6.6 biopolymer transport protein TolR compare
ABIE53_000659 -2.9 -3.4 phosphocarrier protein HPr compare
ABIE53_003536 -2.9 -4.7 glyceraldehyde 3-phosphate dehydrogenase compare
ABIE53_005995 -2.9 -2.1 hypothetical protein compare
ABIE53_003162 -2.8 -4.7 OOP family OmpA-OmpF porin compare
ABIE53_000805 -2.8 -1.9 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABIE53_002862 -2.8 -12.3 outer membrane protein assembly factor BamC compare
ABIE53_003483 -2.8 -6.2 magnesium and cobalt transporter compare
ABIE53_000840 -2.8 -3.8 pyrroline-5-carboxylate reductase compare
ABIE53_003571 -2.8 -2.6 thiol peroxidase compare
ABIE53_002726 -2.8 -8.2 hypothetical protein compare
ABIE53_002077 -2.7 -1.8 phosphoserine phosphatase compare
ABIE53_005554 -2.7 -1.4 AcrR family transcriptional regulator compare
ABIE53_001598 -2.7 -1.5 NADH-quinone oxidoreductase subunit I compare
ABIE53_001588 -2.7 -4.0 triosephosphate isomerase compare
ABIE53_004160 -2.6 -16.4 putative porin compare
ABIE53_003146 -2.6 -5.8 ADP-L-glycero-D-manno-heptose 6-epimerase compare
ABIE53_002739 -2.6 -1.8 outer membrane protein assembly factor BamB compare
ABIE53_002004 -2.5 -7.3 anti-sigma factor RsiW compare
ABIE53_004109 -2.5 -7.6 LysR family transcriptional regulator for bpeEF and oprC compare
ABIE53_005782 -2.5 -1.2 hypothetical protein compare
ABIE53_000667 -2.5 -8.6 glycerol-3-phosphate dehydrogenase (NAD(P)+) compare
ABIE53_002134 -2.5 -8.7 peptidyl-prolyl cis-trans isomerase D compare
ABIE53_004637 -2.5 -8.9 dihydroflavonol-4-reductase compare
ABIE53_003543 -2.5 -14.9 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) compare
ABIE53_004642 -2.4 -13.4 phospholipid transport system substrate-binding protein compare
ABIE53_003043 -2.4 -13.2 RNA polymerase sigma-70 factor (ECF subfamily) compare
ABIE53_003674 -2.4 -4.5 AcrR family transcriptional regulator compare
ABIE53_005102 -2.3 -12.1 phosphoenolpyruvate phosphomutase compare
ABIE53_006272 -2.3 -4.9 AcrR family transcriptional regulator compare
ABIE53_000830 -2.3 -1.9 preprotein translocase subunit YajC compare
ABIE53_003749 -2.3 -4.6 diaminopimelate decarboxylase compare
ABIE53_003586 -2.3 -7.8 putative (di)nucleoside polyphosphate hydrolase compare
ABIE53_001273 -2.3 -9.3 glucokinase compare
ABIE53_003428 -2.3 -3.0 phosphoglycerate kinase compare
ABIE53_002815 -2.2 -3.2 Fe-S cluster biosynthesis and repair protein YggX compare
ABIE53_003434 -2.2 -8.5 heptosyltransferase-2 compare
ABIE53_000063 -2.2 -2.1 adenosylhomocysteinase compare
ABIE53_005104 -2.2 -11.3 2-aminoethylphosphonate-pyruvate transaminase compare
ABIE53_001416 -2.1 -7.1 transaldolase compare
ABIE53_004924 -2.1 -3.4 transcriptional regulator with XRE-family HTH domain compare
ABIE53_001140 -2.1 -2.0 dTDP-4-dehydrorhamnose reductase compare
ABIE53_001316 -2.1 -6.8 uroporphyrinogen III methyltransferase/synthase compare
ABIE53_004643 -2.1 -10.0 hopanoid biosynthesis associated RND transporter like protein HpnN compare
ABIE53_003407 -2.1 -4.4 outer membrane protein TolC compare
ABIE53_004644 -2.0 -12.2 phospholipid-binding lipoprotein MlaA compare
ABIE53_000118 -2.0 -3.5 two-component system chemotaxis response regulator CheY compare
ABIE53_004811 -2.0 -6.7 tryptophan synthase alpha chain compare
ABIE53_000666 -2.0 -4.1 preprotein translocase subunit SecB compare
ABIE53_005103 -2.0 -10.7 phosphonopyruvate decarboxylase compare
ABIE53_004303 -1.9 -5.3 choline kinase compare
ABIE53_001317 -1.9 -6.2 HemY protein compare
ABIE53_000650 -1.9 -8.5 thiol-disulfide isomerase/thioredoxin compare
ABIE53_003588 -1.9 -3.0 glutamate 5-kinase compare
ABIE53_003572 -1.9 -9.2 adenosine kinase compare
ABIE53_001770 -1.9 -4.5 arginine N-succinyltransferase compare
ABIE53_000682 -1.9 -8.9 cytochrome c oxidase assembly protein subunit 15 compare
ABIE53_000875 -1.8 -4.7 tRNA dimethylallyltransferase compare
ABIE53_003843 -1.8 -1.2 tRNA-Gly compare
ABIE53_004181 -1.8 -3.1 sarcosine oxidase subunit beta compare
ABIE53_003511 -1.8 -1.7 glutamate dehydrogenase (NAD(P)+) compare
ABIE53_002496 -1.8 -9.2 regulator of sigma E protease compare
ABIE53_003580 -1.8 -2.4 uncharacterized protein compare
ABIE53_003123 -1.8 -11.0 adenosylcobinamide-phosphate synthase compare
ABIE53_002024 -1.8 -5.3 uncharacterized protein compare
ABIE53_002788 -1.8 -7.0 IclR family KDG regulon transcriptional repressor compare
ABIE53_001644 -1.8 -3.6 aromatic-amino-acid transaminase compare
ABIE53_000663 -1.8 -10.2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE53_000464 -1.8 -4.5 DNA-binding protein H-NS compare
ABIE53_004304 -1.7 -7.2 putative membrane protein compare
ABIE53_004395 -1.7 -2.0 hypothetical protein compare
ABIE53_005514 -1.7 -1.4 putative ATP-grasp superfamily ATP-dependent carboligase compare
ABIE53_005230 -1.7 -1.5 homoprotocatechuate degradation regulator HpaR compare
ABIE53_002117 -1.7 -3.8 ATP-dependent Lon protease compare
ABIE53_003320 -1.7 -4.9 uncharacterized membrane protein (UPF0127 family) compare
ABIE53_003579 -1.7 -5.1 AmpD protein compare
ABIE53_001538 -1.7 -5.4 ribonuclease G compare
ABIE53_002104 -1.7 -5.6 phytoene synthase compare
ABIE53_003875 -1.7 -8.1 DeoR family glycerol-3-phosphate regulon repressor compare
ABIE53_002101 -1.6 -6.4 two-component system phosphate regulon response regulator OmpR compare
ABIE53_000654 -1.6 -5.9 nitrogen regulatory protein P-II 2 compare
ABIE53_000680 -1.6 -7.3 surfeit locus 1 family protein compare
ABIE53_003748 -1.6 -4.9 putative small lipoprotein YifL compare
ABIE53_002485 -1.6 -9.1 pyruvate,water dikinase compare
ABIE53_000649 -1.6 -3.0 peroxiredoxin compare
ABIE53_004701 -1.5 -10.2 membrane protein DedA with SNARE-associated domain/rhodanese-related sulfurtransferase compare
ABIE53_001575 -1.5 -2.3 acetolactate synthase-1/3 small subunit compare
ABIE53_005874 -1.5 -2.0 protease I compare
ABIE53_002066 -1.5 -6.6 acetoacetyl-CoA reductase compare
ABIE53_000795 -1.5 -5.1 MurNAc alpha-1-phosphate uridylyltransferase compare
ABIE53_003019 -1.5 -1.7 copper(I)-binding protein compare
ABIE53_005545 -1.5 -2.8 trans-feruloyl-CoA hydratase/vanillin synthase compare
ABIE53_002782 -1.5 -5.0 Rrf2 family iron-sulfur cluster assembly transcriptional regulator compare
ABIE53_000683 -1.5 -6.7 protoheme IX farnesyltransferase compare
ABIE53_001544 -1.5 -1.7 coproporphyrinogen III oxidase compare
ABIE53_003815 -1.4 -2.8 tRNA-Arg compare
ABIE53_000674 -1.4 -6.3 cytochrome c oxidase subunit 1 compare
ABIE53_003374 -1.4 -8.8 cyclopropane-fatty-acyl-phospholipid synthase compare
ABIE53_003512 -1.4 -2.2 DNA-binding transcriptional LysR family regulator compare
ABIE53_001757 -1.4 -1.6 ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase compare
ABIE53_003305 -1.4 -5.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE53_003288 -1.4 -3.8 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA compare
ABIE53_004435 -1.4 -2.2 hypothetical protein compare
ABIE53_005295 -1.4 -1.2 putative FmdB family regulatory protein compare
ABIE53_002116 -1.4 -2.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABIE53_004866 -1.4 -10.4 RNA polymerase primary sigma factor compare
ABIE53_000614 -1.4 -3.4 rubrerythrin compare
ABIE53_005402 -1.4 -3.3 hypothetical protein compare
ABIE53_001846 -1.4 -3.9 TetR/AcrR family transcriptional repressor of nem operon compare
ABIE53_002450 -1.4 -5.1 cell division protein ZapE compare
ABIE53_001232 -1.4 -1.2 sirohydrochlorin cobaltochelatase compare
ABIE53_004245 -1.4 -1.9 FMN-dependent NADH-azoreductase compare
ABIE53_006154 -1.4 -2.6 DNA-binding transcriptional LysR family regulator compare
ABIE53_002242 -1.4 -1.6 hypothetical protein compare
ABIE53_001421 -1.4 -0.9 cytochrome c553 compare
ABIE53_003409 -1.4 -10.9 membrane fusion protein (multidrug efflux system) compare
ABIE53_003040 -1.4 -6.9 serine protease Do compare
ABIE53_000678 -1.3 -4.8 cytochrome c oxidase subunit 3 compare
ABIE53_003408 -1.3 -11.8 multidrug efflux pump compare
ABIE53_000403 -1.3 -1.7 rod shape-determining protein MreD compare
ABIE53_003406 -1.3 -9.1 NodT family efflux transporter outer membrane factor (OMF) lipoprotein compare
ABIE53_000681 -1.3 -9.2 cytochrome oxidase Cu insertion factor (SCO1/SenC/PrrC family) compare
ABIE53_001228 -1.3 -3.3 phosphoadenosine phosphosulfate reductase compare
ABIE53_001135 -1.3 -1.6 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
ABIE53_002762 -1.3 -2.5 enolase compare
ABIE53_005279 -1.3 -3.6 cytochrome c oxidase subunit 3 compare
ABIE53_001420 -1.3 -3.4 cytochrome c553 compare
ABIE53_006508 -1.3 -2.1 GntR family transcriptional repressor for pyruvate dehydrogenase complex compare
ABIE53_003148 -1.3 -3.7 UDPglucose 6-dehydrogenase compare
ABIE53_001695 -1.3 -3.0 ABC-type Fe3+-hydroxamate transport system substrate-binding protein compare
ABIE53_001216 -1.3 -3.5 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABIE53_004640 -1.3 -7.9 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
ABIE53_002748 -1.3 -6.0 outer membrane protein assembly factor BamC compare
ABIE53_005283 -1.3 -0.8 hypothetical protein compare
ABIE53_004203 -1.3 -2.5 uncharacterized protein (DUF488 family) compare
ABIE53_002114 -1.3 -5.3 trigger factor compare
ABIE53_001229 -1.3 -5.6 sulfate adenylyltransferase subunit 2 compare
ABIE53_002427 -1.2 -5.9 host factor-I protein compare
ABIE53_000684 -1.2 -7.5 protein SCO1/2 compare
ABIE53_006122 -1.2 -2.8 nucleotide-binding universal stress UspA family protein compare
ABIE53_000396 -1.2 -3.4 7-cyano-7-deazaguanine synthase compare
ABIE53_001226 -1.2 -5.8 sulfite reductase (NADPH) hemoprotein beta-component compare
ABIE53_004000 -1.2 -1.3 hypothetical protein compare
ABIE53_004040 -1.2 -3.7 putative iron-regulated membrane protein compare
ABIE53_001485 -1.2 -4.2 TetR/AcrR family tetracycline transcriptional repressor compare
ABIE53_004344 -1.2 -1.9 peptide/nickel transport system permease protein compare
ABIE53_006302 -1.2 -2.1 putative dinucleotide-binding enzyme compare
ABIE53_005936 -1.2 -3.4 precorrin-4/cobalt-precorrin-4 C11-methyltransferase compare
ABIE53_003044 -1.2 -2.4 hypothetical protein compare
ABIE53_001686 -1.2 -2.7 putative ATP-binding cassette transporter compare
ABIE53_000695 -1.2 -4.4 lipid A 3-O-deacylase compare
ABIE53_002010 -1.2 -2.4 putative phosphate transport protein (TIGR00153 family) compare
ABIE53_003460 -1.2 -5.0 mono/diheme cytochrome c family protein compare
ABIE53_004960 -1.2 -4.6 RNA polymerase primary sigma factor compare
ABIE53_004934 -1.2 -2.7 isoquinoline 1-oxidoreductase alpha subunit compare
ABIE53_001272 -1.2 -2.5 putative membrane protein compare
ABIE53_005042 -1.2 -2.1 2-methylcitrate synthase compare
ABIE53_004437 -1.1 -3.4 CitMHS family citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter compare
ABIE53_002794 -1.1 -2.1 PAS domain S-box-containing protein compare
ABIE53_003717 -1.1 -8.4 putative ATP-binding cassette transporter compare
ABIE53_003709 -1.1 -9.2 phospholipid-binding lipoprotein MlaA compare
ABIE53_003976 -1.1 -1.3 NitT/TauT family transport system ATP-binding protein compare
ABIE53_002535 -1.1 -2.1 superfamily II DNA/RNA helicase compare
ABIE53_002168 -1.1 -4.0 hypothetical protein compare


Specific Phenotypes

For 14 genes in this experiment

For stress (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone in Paraburkholderia graminis OAS925

For stress (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone across organisms