Experiment set9IT069 for Ralstonia sp. UNC404CL21Col

Compare to:

Hexanoic acid carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS14535 -6.4 -4.5 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS08630 -5.8 -6.9 dihydroorotase compare
ABZR87_RS02155 -5.7 -7.9 anthranilate phosphoribosyltransferase compare
ABZR87_RS02570 -5.5 -22.6 glutamate synthase-related protein compare
ABZR87_RS16170 -5.4 -3.7 argininosuccinate lyase compare
ABZR87_RS01810 -5.4 -3.7 glutamate 5-kinase compare
ABZR87_RS14505 -5.2 -6.2 phosphoribosylanthranilate isomerase compare
ABZR87_RS02160 -5.2 -7.1 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS02140 -5.2 -19.3 anthranilate synthase component I compare
ABZR87_RS05200 -5.1 -20.5 homoserine O-acetyltransferase compare
ABZR87_RS02145 -5.0 -3.4 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS00210 -4.9 -9.4 nitrite/sulfite reductase compare
ABZR87_RS06770 -4.9 -7.5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS05305 -4.9 -13.7 TetR family transcriptional regulator compare
ABZR87_RS20875 -4.8 -9.7 LysR family transcriptional regulator compare
ABZR87_RS14540 -4.8 -8.5 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS14530 -4.8 -10.1 3-isopropylmalate dehydrogenase compare
ABZR87_RS14500 -4.7 -16.4 tryptophan synthase subunit beta compare
ABZR87_RS09465 -4.6 -9.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS14490 -4.6 -11.5 tryptophan synthase subunit alpha compare
ABZR87_RS13790 -4.6 -11.8 chorismate synthase compare
ABZR87_RS02640 -4.6 -15.6 diaminopimelate decarboxylase compare
ABZR87_RS09445 -4.6 -14.8 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS00190 -4.6 -12.7 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS14950 -4.5 -3.9 acetolactate synthase small subunit compare
ABZR87_RS07360 -4.5 -16.5 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS21795 -4.5 -8.6 NUDIX domain-containing protein compare
ABZR87_RS20880 -4.4 -11.4 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS22970 -4.4 -15.2 cystathionine gamma-synthase family protein compare
ABZR87_RS11440 -4.4 -9.7 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS07380 -4.4 -14.7 FAD/FMN-binding oxidoreductase compare
ABZR87_RS00285 -4.3 -3.0 acetylornithine transaminase compare
ABZR87_RS16660 -4.3 -8.7 helix-turn-helix domain-containing protein compare
ABZR87_RS02595 -4.3 -13.1 shikimate kinase compare
ABZR87_RS11625 -4.3 -12.1 malate synthase A compare
ABZR87_RS00200 -4.3 -5.9 phosphoadenylyl-sulfate reductase compare
ABZR87_RS00185 -4.2 -4.1 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS01110 -4.2 -12.1 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS05170 -4.2 -4.1 acetylglutamate kinase compare
ABZR87_RS02590 -4.1 -11.7 3-dehydroquinate synthase compare
ABZR87_RS00835 -4.0 -8.4 argininosuccinate synthase compare
ABZR87_RS04865 -3.9 -4.7 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS13415 -3.9 -7.5 IclR family transcriptional regulator compare
ABZR87_RS09935 -3.9 -5.3 amino acid aminotransferase compare
ABZR87_RS00220 -3.8 -10.6 CysB family HTH-type transcriptional regulator compare
ABZR87_RS14955 -3.8 -8.0 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS05100 -3.7 -6.3 RNA polymerase-binding protein DksA compare
ABZR87_RS13250 -3.6 -3.8 phosphoserine phosphatase SerB compare
ABZR87_RS08625 -3.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS00195 -3.5 -5.4 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS02565 -3.4 -7.6 glutamate synthase subunit beta compare
ABZR87_RS00205 -3.4 -4.3 DUF934 domain-containing protein compare
ABZR87_RS09710 -3.3 -5.8 tRNA-Arg compare
ABZR87_RS00435 -3.3 -10.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS17145 -3.1 -15.2 AMP nucleosidase compare
ABZR87_RS01645 -3.0 -6.0 type II 3-dehydroquinate dehydratase compare
ABZR87_RS07050 -2.9 -1.9 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS13375 -2.8 -8.1 NUDIX hydrolase compare
ABZR87_RS14115 -2.8 -4.1 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS10565 -2.8 -6.1 cupin domain-containing protein compare
ABZR87_RS06705 -2.7 -14.3 glutamate--cysteine ligase compare
ABZR87_RS00355 -2.7 -11.9 quinolinate synthase NadA compare
ABZR87_RS10240 -2.7 -3.5 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS11815 -2.6 -10.2 [protein-PII] uridylyltransferase compare
ABZR87_RS10980 -2.6 -1.3 tRNA-Leu compare
ABZR87_RS01675 -2.6 -3.0 carbohydrate kinase family protein compare
ABZR87_RS01685 -2.6 -7.1 histone H1-like DNA-binding protein compare
ABZR87_RS08655 -2.6 -5.5 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS12785 -2.5 -3.8 endopeptidase La compare
ABZR87_RS12795 -2.5 -6.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS01615 -2.5 -3.7 RNB domain-containing ribonuclease compare
ABZR87_RS10400 -2.4 -5.9 hypothetical protein compare
ABZR87_RS11195 -2.4 -10.3 pseudouridine synthase compare
ABZR87_RS06845 -2.4 -9.4 heme o synthase compare
ABZR87_RS09555 -2.4 -7.0 acyl-CoA dehydrogenase compare
ABZR87_RS04975 -2.4 -3.5 peptide deformylase compare
ABZR87_RS10170 -2.3 -4.7 RseA family anti-sigma factor compare
ABZR87_RS20555 -2.3 -5.1 helix-turn-helix transcriptional regulator compare
ABZR87_RS05590 -2.3 -3.3 orotate phosphoribosyltransferase compare
ABZR87_RS04125 -2.3 -6.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS05350 -2.2 -7.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS16250 -2.2 -5.5 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS12790 -2.2 -5.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS06710 -2.2 -12.7 glutathione synthase compare
ABZR87_RS00350 -2.2 -5.9 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS09450 -2.1 -6.5 prephenate dehydratase compare
ABZR87_RS11125 -2.1 -8.1 cell division protein ZapE compare
ABZR87_RS06715 -2.0 -3.4 PTS sugar transporter subunit IIA compare
ABZR87_RS18165 -2.0 -2.9 hypothetical protein compare
ABZR87_RS06745 -1.9 -6.6 S41 family peptidase compare
ABZR87_RS06645 -1.9 -2.5 TlpA disulfide reductase family protein compare
ABZR87_RS10120 -1.9 -2.5 YceD family protein compare
ABZR87_RS13300 -1.9 -7.9 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS07760 -1.9 -4.1 HlyC/CorC family transporter compare
ABZR87_RS02235 -1.8 -5.5 response regulator compare
ABZR87_RS14380 -1.8 -5.1 glutamate racemase compare
ABZR87_RS17310 -1.8 -5.0 PadR family transcriptional regulator compare
ABZR87_RS01745 -1.7 -3.7 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
ABZR87_RS14890 -1.7 -1.4 preprotein translocase subunit SecG compare
ABZR87_RS08660 -1.7 -5.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS06395 -1.7 -4.5 response regulator compare
ABZR87_RS16180 -1.7 -5.3 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS00360 -1.7 -2.6 acyl-CoA desaturase compare
ABZR87_RS10175 -1.7 -4.4 MucB/RseB C-terminal domain-containing protein compare
ABZR87_RS11940 -1.7 -3.7 SsrA-binding protein SmpB compare
ABZR87_RS02480 -1.7 -3.4 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS05130 -1.7 -1.4 CsbD family protein compare
ABZR87_RS01605 -1.6 -8.1 shikimate dehydrogenase compare
ABZR87_RS10930 -1.6 -2.5 outer membrane protein assembly factor BamB compare
ABZR87_RS10780 -1.5 -5.0 PD-(D/E)XK nuclease family protein compare
ABZR87_RS04785 -1.5 -6.4 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS00345 -1.5 -9.5 L-aspartate oxidase compare
ABZR87_RS02445 -1.5 -4.0 Sec-independent protein translocase protein TatB compare
ABZR87_RS00605 -1.5 -5.9 hypothetical protein compare
ABZR87_RS10785 -1.5 -5.9 exodeoxyribonuclease V subunit beta compare
ABZR87_RS07605 -1.5 -3.5 D-aminoacyl-tRNA deacylase compare
ABZR87_RS16960 -1.5 -3.5 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS10085 -1.5 -1.6 Rne/Rng family ribonuclease compare
ABZR87_RS01035 -1.4 -6.0 histidine utilization repressor compare
ABZR87_RS05140 -1.4 -2.3 ATP-binding protein compare
ABZR87_RS06400 -1.4 -7.3 response regulator transcription factor compare
ABZR87_RS00970 -1.4 -1.3 molecular chaperone DnaJ compare
ABZR87_RS23035 -1.4 -1.4 PIG-L family deacetylase compare
ABZR87_RS08980 -1.4 -4.1 cell envelope integrity protein TolA compare
ABZR87_RS09200 -1.4 -10.6 long-chain fatty acid--CoA ligase compare
ABZR87_RS08695 -1.4 -7.5 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS09515 -1.4 -1.4 cysteine synthase CysM compare
ABZR87_RS16080 -1.4 -1.8 P-II family nitrogen regulator compare
ABZR87_RS10610 -1.3 -1.7 inositol monophosphatase family protein compare
ABZR87_RS13350 -1.3 -4.5 potassium transporter Kup compare
ABZR87_RS07625 -1.3 -3.4 Holliday junction branch migration protein RuvA compare
ABZR87_RS06030 -1.3 -1.4 AraC family transcriptional regulator compare
ABZR87_RS00215 -1.3 -3.4 sulfite exporter TauE/SafE family protein compare
ABZR87_RS00865 -1.3 -1.3 VTT domain-containing protein compare
ABZR87_RS20795 -1.2 -3.8 peptide chain release factor H compare
ABZR87_RS04940 -1.2 -5.5 PAS domain-containing sensor histidine kinase compare
ABZR87_RS15685 -1.2 -4.5 TIGR00730 family Rossman fold protein compare
ABZR87_RS02325 -1.2 -3.9 cytochrome o ubiquinol oxidase subunit III compare
ABZR87_RS02225 -1.2 -6.8 ATP-binding protein compare
ABZR87_RS00325 -1.2 -2.2 peptidylprolyl isomerase compare
ABZR87_RS18910 -1.2 -1.4 DUF2239 family protein compare
ABZR87_RS12780 -1.2 -1.4 HU family DNA-binding protein compare
ABZR87_RS02630 -1.2 -3.7 iron donor protein CyaY compare
ABZR87_RS23415 -1.2 -2.5 metalloregulator ArsR/SmtB family transcription factor compare
ABZR87_RS08670 -1.2 -6.4 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
ABZR87_RS07510 -1.1 -3.3 LysR family transcriptional regulator compare
ABZR87_RS17315 -1.1 -4.0 MarR family transcriptional regulator compare
ABZR87_RS20665 -1.1 -2.7 IclR family transcriptional regulator compare
ABZR87_RS06850 -1.1 -6.8 SCO family protein compare
ABZR87_RS11435 -1.1 -3.8 Mth938-like domain-containing protein compare
ABZR87_RS14575 -1.1 -4.7 GntR family transcriptional regulator compare
ABZR87_RS19010 -1.1 -2.4 acyloxyacyl hydrolase compare
ABZR87_RS08700 -1.1 -4.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS06385 -1.1 -7.1 CHASE3 domain-containing protein compare
ABZR87_RS05060 -1.1 -3.2 DUF484 family protein compare
ABZR87_RS08990 -1.1 -4.5 peptidoglycan-associated lipoprotein Pal compare
ABZR87_RS13645 -1.1 -0.9 hypothetical protein compare
ABZR87_RS16165 -1.1 -0.8 anti-sigma factor compare
ABZR87_RS02385 -1.1 -3.5 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS07700 -1.1 -1.8 peptidylprolyl isomerase compare
ABZR87_RS10820 -1.0 -5.0 LysR substrate-binding domain-containing protein compare
ABZR87_RS17485 -1.0 -3.0 enoyl-CoA hydratase/isomerase family protein compare
ABZR87_RS11015 -1.0 -4.2 amino-acid N-acetyltransferase compare
ABZR87_RS05145 -1.0 -1.4 copper chaperone PCu(A)C compare
ABZR87_RS02575 -1.0 -3.9 transposase compare
ABZR87_RS16185 -1.0 -1.8 dCTP deaminase compare
ABZR87_RS05000 -1.0 -7.2 LysR family transcriptional regulator compare
ABZR87_RS10985 -1.0 -6.9 ribonuclease R compare
ABZR87_RS11620 -1.0 -3.6 haloacid dehalogenase type II compare
ABZR87_RS02540 -1.0 -4.8 VacJ family lipoprotein compare
ABZR87_RS02020 -1.0 -6.0 long-chain fatty acid--CoA ligase compare
ABZR87_RS21285 -1.0 -1.8 TetR/AcrR family transcriptional regulator compare
ABZR87_RS18320 -1.0 -2.2 HEAT repeat domain-containing protein compare
ABZR87_RS06955 -1.0 -6.6 pitrilysin family protein compare
ABZR87_RS03180 -1.0 -2.1 hypothetical protein compare
ABZR87_RS02440 -1.0 -5.1 twin-arginine translocase subunit TatC compare
ABZR87_RS05005 -0.9 -6.6 AMP-binding protein compare
ABZR87_RS00875 -0.9 -2.4 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS07730 -0.9 -1.8 lysophospholipid acyltransferase family protein compare
ABZR87_RS20650 -0.9 -1.9 aspartate dehydrogenase compare
ABZR87_RS05205 -0.9 -2.1 methionine biosynthesis protein MetW compare
ABZR87_RS06950 -0.9 -5.4 pitrilysin family protein compare
ABZR87_RS11245 -0.9 -3.3 translational GTPase TypA compare
ABZR87_RS07635 -0.9 -2.2 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS04945 -0.9 -1.9 DUF4390 domain-containing protein compare
ABZR87_RS12800 -0.9 -3.2 trigger factor compare
ABZR87_RS20450 -0.9 -1.3 HAD family phosphatase compare
ABZR87_RS04105 -0.9 -2.3 ATP synthase subunit I compare
ABZR87_RS12965 -0.9 -1.6 tail protein X compare
ABZR87_RS08875 -0.9 -2.0 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II compare
ABZR87_RS21815 -0.9 -0.7 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS19035 -0.9 -2.1 response regulator compare
ABZR87_RS02150 -0.9 -1.6 lysozyme inhibitor LprI family protein compare
ABZR87_RS09105 -0.9 -5.5 IclR family transcriptional regulator compare
ABZR87_RS11010 -0.9 -2.0 oxidative damage protection protein compare
ABZR87_RS12735 -0.8 -5.6 winged helix DNA-binding protein compare
ABZR87_RS22325 -0.8 -3.4 H-NS histone family protein compare
ABZR87_RS17465 -0.8 -3.0 AMP-binding protein compare
ABZR87_RS09870 -0.8 -4.3 VWA domain-containing protein compare
ABZR87_RS13315 -0.8 -5.5 RluA family pseudouridine synthase compare


Specific Phenotypes

None in this experiment

For Ralstonia sp. UNC404CL21Col in carbon source experiments

For carbon source Hexanoic acid across organisms