Experiment set9IT068 for Sinorhizobium meliloti 1021

Compare to:

D-Mannose carbon source

200 most important genes:

  gene name fitness t score description  
SMc01494 -8.4 -5.8 phosphoserine phosphatase compare
SMc02123 -8.1 -3.3 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02766 -7.6 -15.5 tryptophan synthase subunit beta compare
SMc01726 -7.3 -5.1 acetylglutamate kinase compare
SMc02767 -7.3 -7.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00614 -7.2 -5.0 phosphoribosylglycinamide formyltransferase compare
SMc01054 -7.0 -4.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc02572 -6.9 -5.5 imidazole glycerol phosphate synthase subunit HisH compare
SMc02899 -6.9 -9.4 prephenate dehydratase compare
SMc03797 -6.9 -8.2 homoserine O-succinyltransferase compare
SMc02569 -6.8 -4.7 imidazole glycerol phosphate synthase subunit HisF compare
SMc00236 -6.7 -6.5 Indole-3-glycerol phosphate synthase compare
SMc04045 -6.6 -6.4 dihydroxy-acid dehydratase compare
SMc04405 -6.6 -7.8 3-isopropylmalate dehydrogenase compare
SMc00993 -6.6 -6.4 phosphoribosylamine--glycine ligase compare
SMc00918 -6.5 -6.3 ATP phosphoribosyltransferase regulatory subunit compare
SMc02725 -6.3 -10.6 anthranilate synthase compare
SMc00488 -6.3 -15.2 phosphoribosylformylglycinamidine synthase II compare
SMc00711 -6.3 -4.3 cyclohexadienyl dehydrogenase compare
SMc01431 -6.2 -8.5 acetolactate synthase 3 catalytic subunit compare
SMa1635 -6.2 -2.5 hypothetical protein compare
SMc04002 -6.1 -10.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc04028 -6.1 -11.1 glutamate synthase compare
SMc01843 -6.1 -11.8 5,10-methylenetetrahydrofolate reductase compare
SMc00640 -6.1 -5.9 phosphoserine aminotransferase compare
SMc03112 -6.1 -14.7 B12-dependent methionine synthase compare
SMc02765 -6.0 -11.4 tryptophan synthase subunit alpha compare
SMc02717 -6.0 -11.6 2-isopropylmalate synthase compare
SMc00495 -6.0 -5.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00131 -6.0 -14.0 transcriptional regulator compare
SMc00235 -5.9 -8.1 anthranilate phosphoribosyltransferase compare
SMc03776 -5.9 -4.1 gamma-glutamyl kinase compare
SMc00615 -5.9 -10.2 phosphoribosylaminoimidazole synthetase compare
SMc03111 -5.8 -6.9 mannose 6-phosphate isomerase (EC 5.3.1.8) (from data) compare
SMc01801 -5.8 -4.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00917 -5.7 -5.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00092 -5.6 -10.8 phosphoadenosine phosphosulfate reductase compare
SMc03823 -5.6 -9.8 isopropylmalate isomerase large subunit compare
SMc03895 -5.6 -15.6 pyruvate carboxylase compare
SMc01004 -5.5 -9.4 phosphoribosyl-AMP cyclohydrolase compare
SMc00554 -5.5 -3.8 amidophosphoribosyltransferase compare
SMc02978 -5.4 -5.3 hypothetical protein compare
SMc02124 -5.4 -12.1 nitrite reductase compare
SMc00493 -5.4 -7.3 phosphoribosylformylglycinamidine synthase I compare
SMc00090 -5.4 -9.7 sulfate adenylyltransferase compare
SMc03109 -5.3 -10.1 Mannokinase (EC 2.7.1.7) (from data) conserved
SMc00293 -5.2 -9.6 homoserine dehydrogenase compare
SMc02137 -5.2 -3.5 ornithine carbamoyltransferase compare
SMc02217 -5.1 -6.9 O-succinylhomoserine sulfhydrylase compare
SMc04026 -5.0 -8.0 glutamate synthase compare
SM_b21175 -5.0 -4.9 phosphate uptake ABC transporter permease compare
SMc02245 -4.8 -4.9 dihydroorotate dehydrogenase 2 compare
SM_b21177 -4.8 -9.2 phosphate uptake ABC transporter ATP-binding protein compare
SMc04088 -4.8 -7.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03981 -4.7 -5.7 phosphoglycerate kinase compare
SMc03777 -4.6 -7.6 gamma-glutamyl phosphate reductase compare
SMc04001 -4.5 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02307 -4.4 -6.8 histidinol dehydrogenase compare
SM_b21176 -4.4 -5.2 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00494 -4.4 -2.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02755 -4.4 -3.0 S-adenosyl-L-homocysteine hydrolase compare
SMc03229 -4.4 -3.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02165 -4.4 -5.2 orotate phosphoribosyltransferase compare
SMc03070 -4.2 -5.0 glucose-6-phosphate 1-dehydrogenase compare
SMc00641 -4.2 -7.0 D-3-phosphoglycerate dehydrogenase compare
SMc02983 -4.2 -8.0 ornithine, DAP, or arginine decarboxylase compare
SMc02570 -4.1 -4.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00294 -4.1 -11.1 aminotransferase compare
SMc00091 -4.0 -12.1 sulfate adenylyltransferase compare
SMc03979 -4.0 -3.2 glyceraldehyde-3-phosphate dehydrogenase compare
SM_b21174 -3.8 -4.4 phosphate uptake ABC transporter permease compare
SMc01053 -3.8 -4.7 siroheme synthase compare
SMc03795 -3.8 -2.1 isopropylmalate isomerase small subunit compare
SMc02166 -3.7 -9.1 dihydroorotase compare
SMc00412 -3.6 -5.0 orotidine 5'-phosphate decarboxylase compare
SMc01770 -3.5 -1.7 serine hydroxymethyltransferase compare
SMc00017 -3.5 -1.8 homoserine kinase compare
SMc00876 -3.5 -2.4 ATP-binding MRP protein compare
SMc04005 -3.5 -7.6 pyruvate kinase compare
SMc00882 -3.4 -4.4 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMc01360 -3.4 -2.3 aspartate carbamoyltransferase catalytic subunit compare
SMc03068 -3.4 -12.9 phosphogluconate dehydratase compare
SMc02138 -3.4 -5.4 acetylornithine transaminase compare
SMc02574 -3.4 -5.9 imidazoleglycerol-phosphate dehydratase compare
SMc02640 -3.4 -4.6 UDP-glucuronic acid epimerase compare
SMc01124 -3.3 -9.7 PII uridylyl-transferase compare
SMc00302 -3.3 -1.8 hypothetical protein compare
SMc04346 -3.2 -5.2 ketol-acid reductoisomerase compare
SMc01430 -3.2 -4.7 acetolactate synthase 3 regulatory subunit compare
SMc02246 -3.1 -1.2 hypothetical protein compare
SMc01220 -3.0 -4.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02707 -2.9 -3.1 hypothetical protein compare
SMc03153 -2.9 -3.9 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc01028 -2.7 -12.0 phosphopyruvate hydratase compare
SMc02979 -2.6 -7.9 hypothetical protein compare
SMc02058 -2.6 -3.5 YAJC protein compare
SMc02858 -2.5 -1.0 chaperone protein DnaJ compare
SMc01881 -2.5 -2.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01440 -2.3 -4.9 hydrolase serine protease transmembrane protein compare
SMc02641 -2.3 -2.1 UDP-glucose 6-dehydrogenase compare
SMc00982 -2.3 -6.2 dioxygenase compare
SMc01613 -2.3 -4.9 ribose-5-phosphate isomerase B compare
SMc00414 -2.2 -9.2 hypothetical protein compare
SMc02055 -2.1 -2.4 phytoene synthase compare
SMc01880 -2.1 -1.4 pantoate--beta-alanine ligase compare
SMc02838 -2.1 -6.9 phosphoglyceromutase compare
SMc03069 -2.1 -2.2 6-phosphogluconolactonase compare
SMc03978 -2.0 -1.4 transketolase compare
SMc01578 -2.0 -8.1 aspartate aminotransferase compare
SMc00450 -2.0 -1.3 protoheme IX farnesyltransferase compare
SMc02172 -1.9 -8.3 transcriptional regulator compare
SMc02724 -1.9 -3.4 hypothetical protein compare
SMc02112 -1.9 -4.5 hypothetical protein compare
SMc01119 -1.8 -2.4 hypothetical protein compare
SM_b20994 -1.8 -3.7 hypothetical protein compare
SMc00010 -1.8 -1.2 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03924 -1.8 -9.1 glycogen synthase compare
SMc01368 -1.7 -5.2 transport transmembrane protein compare
SMc03110 -1.7 -3.9 hypothetical protein compare
SMc00580 -1.7 -2.4 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc01361 -1.7 -2.3 dihydroorotase compare
SMc01206 -1.6 -1.3 queuine tRNA-ribosyltransferase compare
SMc02451 -1.6 -1.7 hypothetical protein compare
SMc01939 -1.6 -1.6 urease subunit beta compare
SMc01852 -1.5 -8.1 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc02897 -1.5 -2.4 cytochrome C transmembrane protein compare
SM_b20902 -1.5 -8.5 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc01842 -1.4 -1.6 methyltransferase transcription regulator protein compare
SMc02362 -1.4 -1.3 cytochrome c-type biogenesis protein CcmE compare
SM_b20904 -1.4 -3.7 sugar uptake ABC transporter ATP-binding protein compare
SMc02141 -1.4 -0.9 phosphate transporter PhoU compare
SMc00981 -1.4 -4.4 ferredoxin protein compare
SMc02434 -1.3 -2.5 hypothetical protein compare
SMc02510 -1.3 -0.7 ferric uptake regulation protein compare
SM_b20105 -1.3 -1.5 transcriptional regulator compare
SM_b20903 -1.3 -5.3 sugar uptake ABC transporter permease compare
SMc01207 -1.3 -1.7 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SM_b20452 -1.3 -2.4 hypothetical protein compare
SMc03763 -1.3 -0.9 cytosine-specific methyltransferase compare
SMc01024 -1.2 -1.3 preprotein translocase subunit SecG compare
SMc04245 -1.2 -8.0 high-affinity zinc uptake system ABC transporter protein compare
SMc02659 -1.2 -3.9 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc00760 -1.2 -3.1 recombinase A compare
SMc00815 -1.2 -0.7 inosine 5'-monophosphate dehydrogenase compare
SMc00067 -1.2 -5.3 outer-membranne lipoprotein compare
SMc04348 -1.2 -1.1 transcriptional regulator compare
SMc02143 -1.1 -2.3 phosphate ABC transporter permease compare
SMc01041 -1.1 -3.7 NIFR3-like protein compare
SM_b20948 -1.1 -1.3 glucosyltransferase compare
SMc02631 -1.1 -1.3 hypothetical protein compare
SMc00513 -1.1 -4.3 amino acid-binding periplasmic protein compare
SMc02812 -1.1 -2.3 hypothetical protein compare
SMc03899 -1.1 -0.9 hypothetical protein compare
SMc02234 -1.1 -1.6 hypothetical protein compare
SM_b20148 -1.1 -3.5 transcriptional regulator compare
SMa5023 -1.1 -1.6 hypothetical protein compare
SM_b20258 -1.1 -2.2 transcriptional regulator compare
SMc01441 -1.1 -3.1 membrane bound protease compare
SMc01454 -1.0 -7.3 hypothetical protein compare
SMc02121 -1.0 -1.1 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02107 -1.0 -1.1 hypothetical protein compare
SMc00928 -1.0 -0.9 signal peptide protein compare
SM_b21130 -1.0 -5.3 sulfate ABC transporter ATP-binding protein compare
SMc01261 -1.0 -4.4 transporter transmembrane protein compare
SMc01505 -1.0 -1.4 hypothetical protein compare
SMc02485 -1.0 -1.4 signal peptide protein compare
SM_b21132 -1.0 -2.7 sulfate ABC transporter permease compare
SMa0050 -1.0 -2.9 hypothetical protein compare
SMc02561 -1.0 -1.8 hypothetical protein compare
SMc02407 -1.0 -5.1 hypothetical protein compare
SMc00188 -1.0 -4.5 cytochrome B transmembrane protein compare
SMc00189 -1.0 -3.4 cytochrome C1 protein compare
SM_b21133 -1.0 -5.5 sulfate ABC transporter substrate-binding protein compare
SMa2020 -0.9 -3.5 Transcriptional regulator compare
SMc02683 -0.9 -1.6 hypothetical protein compare
SMc00405 -0.9 -4.1 hypothetical protein compare
SM_b20294 -0.9 -0.6 transcriptional regulator NanR compare
SMc04454 -0.9 -3.6 ABC transporter ATP-binding protein compare
SMc01174 -0.9 -5.1 cysteine synthase A compare
SM_b21674 -0.9 -2.7 hypothetical protein compare
SM_b21395 -0.9 -1.7 hypothetical protein compare
SMc02758 -0.9 -2.8 nucleotidyl transferase compare
SMc02142 -0.9 -2.0 phosphate transporter ATP-binding protein compare
SMc02261 -0.9 -2.4 transcriptional regulator compare
SM_b20647 -0.9 -2.7 hypothetical protein compare
SMc01651 -0.9 -2.5 transcriptional regulator compare
SMa2289 -0.9 -1.1 hypothetical protein compare
SM_b20398 -0.9 -2.6 hypothetical protein compare
SMc02695 -0.9 -2.5 GTP-dependent nucleic acid-binding protein EngD compare
SMc04014 -0.9 -3.0 hypothetical protein compare
SMc01043 -0.9 -4.6 nitrogen assimilation regulatory protein compare
SMc02227 -0.9 -2.7 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc01540 -0.8 -1.8 hypothetical protein compare
SMc01222 -0.8 -3.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01153 -0.8 -0.8 enoyl-CoA hydratase compare
SMc00667 -0.8 -1.3 hypothetical protein compare
SMc02232 -0.8 -1.3 hypothetical protein compare
SMc00727 -0.8 -4.1 3-hydroxybutyryl-CoA dehydrogenase compare
SMc02850 -0.8 -1.1 DNA polymerase I compare
SMc02048 -0.8 -3.1 glycine cleavage system protein H compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Mannose in Sinorhizobium meliloti 1021

For carbon source D-Mannose across organisms