Experiment set9IT067 for Ralstonia solanacearum IBSBF1503

Compare to:

Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted

200 most important genes:

  gene name fitness t score description  
RALBFv3_RS14010 -4.3 -4.0 tRNA-Arg compare
RALBFv3_RS10690 -4.0 -4.2 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
RALBFv3_RS12475 -3.8 -11.2 MFS transporter compare
RALBFv3_RS11420 -3.8 -14.9 FAD-linked oxidase compare
RALBFv3_RS16275 -3.6 -17.0 hypothetical protein compare
RALBFv3_RS13755 -3.6 -8.3 3-phosphoserine/phosphohydroxythreonine transaminase compare
RALBFv3_RS22185 -3.5 -14.0 glucan biosynthesis protein D compare
RALBFv3_RS10920 -3.4 -0.9 glycerol-3-phosphate dehydrogenase compare
RALBFv3_RS06785 -3.4 -2.3 twin-arginine translocase subunit TatC compare
RALBFv3_RS22965 -3.4 -16.7 hypothetical protein compare
RALBFv3_RS01300 -3.3 -1.4 glucose-6-phosphate isomerase compare
RALBFv3_RS12700 -3.1 -1.3 lipopolysaccharide heptosyltransferase I compare
RALBFv3_RS19100 -3.1 -6.2 multidrug MFS transporter compare
RALBFv3_RS18660 -3.0 -11.1 fructosidase compare
RALBFv3_RS09535 -2.9 -14.8 homoserine O-acetyltransferase compare
RALBFv3_RS13815 -2.9 -4.4 ADP-glyceromanno-heptose 6-epimerase compare
RALBFv3_RS16385 -2.8 -5.7 phosphogluconate dehydratase compare
RALBFv3_RS23150 -2.7 -1.0 hypothetical protein compare
RALBFv3_RS04610 -2.7 -3.2 CysB family HTH-type transcriptional regulator compare
RALBFv3_RS19165 -2.7 -0.9 hypothetical protein compare
RALBFv3_RS01490 -2.7 -6.4 polyhydroxyalkanoate synthesis repressor PhaR compare
RALBFv3_RS07425 -2.6 -2.5 N-acylglucosamine 2-epimerase compare
RALBFv3_RS12670 -2.5 -3.4 glycosyltransferase family 2 protein compare
RALBFv3_RS04190 -2.5 -8.4 NAD+ synthase compare
RALBFv3_RS13810 -2.5 -1.0 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
RALBFv3_RS01615 -2.4 -1.4 IclR family transcriptional regulator compare
RALBFv3_RS20565 -2.4 -1.0 cysteine dioxygenase compare
RALBFv3_RS06615 -2.4 -1.6 glucan biosynthesis protein D compare
RALBFv3_RS24480 -2.4 -1.2 hypothetical protein compare
RALBFv3_RS04505 -2.4 -0.8 cell division protein ZapA compare
RALBFv3_RS10055 -2.4 -2.4 lauroyl acyltransferase compare
RALBFv3_RS10905 -2.3 -2.4 rhodanese-like domain-containing protein compare
RALBFv3_RS05210 -2.3 -3.6 membrane protein compare
RALBFv3_RS06595 -2.3 -0.6 peptide chain release factor N(5)-glutamine methyltransferase compare
RALBFv3_RS14895 -2.2 -0.5 outer membrane protein assembly factor BamC compare
RALBFv3_RS24555 -2.2 -1.9 metal-binding protein compare
RALBFv3_RS19140 -2.2 -7.0 acetyltransferase compare
RALBFv3_RS00770 -2.2 -1.1 muconolactone delta-isomerase compare
RALBFv3_RS19145 -2.2 -3.3 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
RALBFv3_RS15310 -2.2 -2.1 FtsH protease activity modulator HflK compare
RALBFv3_RS01700 -2.2 -1.3 exodeoxyribonuclease III compare
RALBFv3_RS05685 -2.2 -1.1 tRNA guanosine(34) transglycosylase Tgt compare
RALBFv3_RS08675 -2.2 -11.8 hypothetical protein compare
RALBFv3_RS00200 -2.2 -2.9 lysophospholipid transporter LplT compare
RALBFv3_RS11780 -2.1 -0.5 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RALBFv3_RS01320 -2.1 -2.4 peptidylprolyl isomerase compare
RALBFv3_RS10990 -2.1 -1.9 protoheme IX farnesyltransferase compare
RALBFv3_RS12685 -2.1 -8.8 glycosyl transferase compare
RALBFv3_RS07005 -2.0 -1.9 membrane protein compare
RALBFv3_RS19110 -2.0 -4.1 transferase compare
RALBFv3_RS02875 -2.0 -1.1 MaoC family dehydratase compare
RALBFv3_RS09875 -2.0 -3.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
RALBFv3_RS06490 -2.0 -0.5 type 1 glutamine amidotransferase compare
RALBFv3_RS06620 -1.9 -2.9 glucans biosynthesis glucosyltransferase MdoH compare
RALBFv3_RS01305 -1.9 -2.0 ABC transporter ATP-binding protein compare
RALBFv3_RS15230 -1.9 -0.8 hypothetical protein compare
RALBFv3_RS06135 -1.9 -0.9 RNA pyrophosphohydrolase compare
RALBFv3_RS05690 -1.9 -0.8 preprotein translocase subunit YajC compare
RALBFv3_RS10770 -1.8 -3.7 D-alanyl-D-alanine carboxypeptidase compare
RALBFv3_RS20705 -1.8 -0.7 cytochrome c compare
RALBFv3_RS03470 -1.8 -1.4 hypothetical protein compare
RALBFv3_RS18655 -1.8 -4.4 PTS sugar transporter compare
RALBFv3_RS01505 -1.7 -4.1 class I poly(R)-hydroxyalkanoic acid synthase compare
RALBFv3_RS01455 -1.7 -0.8 phosphoserine phosphatase SerB compare
RALBFv3_RS24585 -1.7 -0.6 hypothetical protein compare
RALBFv3_RS15870 -1.7 -2.2 pyridoxal phosphate-dependent aminotransferase compare
RALBFv3_RS15415 -1.7 -0.8 putative addiction module antidote protein compare
RALBFv3_RS24495 -1.7 -0.7 hypothetical protein compare
RALBFv3_RS01560 -1.7 -1.0 potassium transporter Kup compare
RALBFv3_RS18670 -1.7 -3.4 phosphoenolpyruvate--protein phosphotransferase compare
RALBFv3_RS16865 -1.6 -1.8 DUF802 domain-containing protein compare
RALBFv3_RS14455 -1.6 -0.8 sugar dehydratase compare
RALBFv3_RS10435 -1.6 -3.5 hydroxymethylglutaryl-CoA lyase compare
RALBFv3_RS20605 -1.6 -0.8 PaaI family thioesterase compare
RALBFv3_RS10895 -1.6 -2.3 S41 family peptidase compare
RALBFv3_RS07730 -1.6 -0.9 general secretion pathway protein GspM compare
RALBFv3_RS19810 -1.6 -1.7 TetR/AcrR family transcriptional regulator compare
RALBFv3_RS16390 -1.6 -7.6 glucose-6-phosphate dehydrogenase compare
RALBFv3_RS19665 -1.5 -2.2 leucine-rich repeat domain-containing protein compare
RALBFv3_RS03605 -1.5 -4.3 glycosyltransferase family 2 protein compare
RALBFv3_RS19125 -1.5 -4.3 threonine dehydrogenase-zn-dependent dehydrogenase compare
RALBFv3_RS03555 -1.5 -4.2 nicotinate-nucleotide adenylyltransferase compare
RALBFv3_RS22005 -1.5 -0.3 hypothetical protein compare
RALBFv3_RS02025 -1.5 -0.7 hypothetical protein compare
RALBFv3_RS08715 -1.5 -7.9 potassium transporter Kef compare
RALBFv3_RS21245 -1.4 -3.7 efflux RND transporter periplasmic adaptor subunit compare
RALBFv3_RS03110 -1.4 -0.5 DUF924 domain-containing protein compare
RALBFv3_RS03755 -1.4 -1.5 TIGR00730 family Rossman fold protein compare
RALBFv3_RS14400 -1.4 -1.0 septum formation protein Maf compare
RALBFv3_RS11720 -1.4 -3.0 nucleotidyltransferase family protein compare
RALBFv3_RS09940 -1.4 -7.6 phosphomethylpyrimidine synthase ThiC compare
RALBFv3_RS02305 -1.4 -3.7 formyltetrahydrofolate deformylase compare
RALBFv3_RS22270 -1.4 -5.4 peroxiredoxin compare
RALBFv3_RS13965 -1.4 -5.6 metalloprotease PmbA compare
RALBFv3_RS02125 -1.4 -2.8 phosphate regulon transcriptional regulatory protein PhoB compare
RALBFv3_RS09195 -1.4 -0.9 Rrf2 family transcriptional regulator compare
RALBFv3_RS11130 -1.4 -5.3 GTPase compare
RALBFv3_RS01865 -1.4 -3.1 CBS domain-containing protein compare
RALBFv3_RS21255 -1.4 -3.6 hypothetical protein compare
RALBFv3_RS10430 -1.3 -0.7 YbaK/EbsC family protein compare
RALBFv3_RS04600 -1.3 -1.9 sulfite reductase compare
RALBFv3_RS03615 -1.3 -2.3 ligase compare
RALBFv3_RS24605 -1.3 -1.5 hypothetical protein compare
RALBFv3_RS10210 -1.3 -1.6 GtrA family protein compare
RALBFv3_RS17525 -1.3 -2.7 hypothetical protein compare
RALBFv3_RS14445 -1.3 -1.0 RNA polymerase sigma factor RpoE compare
RALBFv3_RS13760 -1.3 -2.7 chorismate mutase compare
RALBFv3_RS06230 -1.3 -0.6 M23 family peptidase compare
RALBFv3_RS02465 -1.3 -2.0 glutamate racemase compare
RALBFv3_RS16290 -1.3 -1.3 hypothetical protein compare
RALBFv3_RS05680 -1.3 -1.2 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
RALBFv3_RS20525 -1.3 -2.0 cobalamin biosynthesis protein CbiG compare
RALBFv3_RS13675 -1.3 -2.4 PAAR domain-containing protein compare
RALBFv3_RS00640 -1.3 -0.3 hypothetical protein compare
RALBFv3_RS12015 -1.3 -1.6 recombination regulator RecX compare
RALBFv3_RS06120 -1.3 -3.5 2-oxoglutarate-dependent dioxygenase compare
RALBFv3_RS02235 -1.3 -0.7 conjugal transfer protein TraR compare
RALBFv3_RS12910 -1.3 -1.4 protein TolQ compare
RALBFv3_RS10595 -1.2 -1.1 response regulator compare
RALBFv3_RS10865 -1.2 -0.5 PTS fructose transporter subunit IIA compare
RALBFv3_RS03650 -1.2 -2.1 ATP-dependent helicase compare
RALBFv3_RS24180 -1.2 -3.4 hypothetical protein compare
RALBFv3_RS18665 -1.2 -7.5 porin LamB compare
RALBFv3_RS18435 -1.2 -0.7 UDP-glucose 4-epimerase GalE compare
RALBFv3_RS19565 -1.2 -0.7 type III secretion protein HpaP compare
RALBFv3_RS15035 -1.2 -2.0 ABC transporter substrate-binding protein compare
RALBFv3_RS24305 -1.2 -0.7 hypothetical protein compare
RALBFv3_RS19635 -1.2 -4.1 hypothetical protein compare
RALBFv3_RS06915 -1.2 -6.6 glutamate synthase subunit alpha compare
RALBFv3_RS08900 -1.2 -1.5 phosphohydrolase compare
RALBFv3_RS13725 -1.2 -5.4 phosphoglycolate phosphatase compare
RALBFv3_RS02685 -1.2 -2.2 bifunctional 2-methylcitrate dehydratase/aconitate hydratase compare
RALBFv3_RS14870 -1.2 -0.6 threonylcarbamoyl-AMP synthase compare
RALBFv3_RS05445 -1.2 -3.3 TIGR02099 family protein compare
RALBFv3_RS05915 -1.1 -1.5 CinA family protein compare
RALBFv3_RS19515 -1.1 -1.0 EscT/YscT/HrcT family type III secretion system export apparatus protein compare
RALBFv3_RS12145 -1.1 -0.8 lipopolysaccharide heptosyltransferase II compare
RALBFv3_RS03900 -1.1 -2.5 amino acid ABC transporter ATP-binding protein compare
RALBFv3_RS23215 -1.1 -1.9 hypothetical protein compare
RALBFv3_RS21495 -1.1 -1.5 hypothetical protein compare
RALBFv3_RS08765 -1.1 -3.7 LysR family transcriptional regulator compare
RALBFv3_RS03610 -1.1 -4.9 glycosyl transferase compare
RALBFv3_RS23080 -1.1 -2.4 DUF2249 domain-containing protein compare
RALBFv3_RS00175 -1.1 -0.7 DUF1857 domain-containing protein compare
RALBFv3_RS10795 -1.1 -1.1 sigma-54-dependent Fis family transcriptional regulator compare
RALBFv3_RS00365 -1.1 -1.7 [protein-PII] uridylyltransferase compare
RALBFv3_RS02720 -1.1 -0.6 peroxide stress protein YaaA compare
RALBFv3_RS14565 -1.1 -1.8 DNA-binding response regulator compare
RALBFv3_RS17895 -1.1 -3.5 TetR/AcrR family transcriptional regulator compare
RALBFv3_RS07745 -1.1 -4.6 type II secretion system protein GspE compare
RALBFv3_RS11725 -1.1 -2.4 branched-chain amino acid transporter compare
RALBFv3_RS13005 -1.1 -4.2 membrane protein compare
RALBFv3_RS05140 -1.1 -2.2 site-specific tyrosine recombinase XerD compare
RALBFv3_RS03320 -1.1 -1.8 DNA-directed RNA polymerase subunit omega compare
RALBFv3_RS21240 -1.0 -6.4 CusA/CzcA family heavy metal efflux RND transporter compare
RALBFv3_RS02610 -1.0 -0.5 3-isopropylmalate dehydrogenase compare
RALBFv3_RS23410 -1.0 -0.9 MarR family transcriptional regulator compare
RALBFv3_RS11170 -1.0 -4.7 RNA polymerase sigma-54 factor compare
RALBFv3_RS21360 -1.0 -6.3 MFS transporter compare
RALBFv3_RS17865 -1.0 -1.8 DeoR/GlpR transcriptional regulator compare
RALBFv3_RS24510 -1.0 -0.6 hypothetical protein compare
RALBFv3_RS03070 -1.0 -3.1 RDD family protein compare
RALBFv3_RS13775 -1.0 -0.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
RALBFv3_RS21715 -1.0 -2.5 flagellar basal-body rod protein FlgG compare
RALBFv3_RS19890 -1.0 -1.4 Crp/Fnr family transcriptional regulator compare
RALBFv3_RS05175 -1.0 -1.2 DUF1255 domain-containing protein compare
RALBFv3_RS14105 -1.0 -2.8 EamA/RhaT family transporter compare
RALBFv3_RS23925 -1.0 -1.1 hypothetical protein compare
RALBFv3_RS06720 -1.0 -3.0 cytochrome c compare
RALBFv3_RS04200 -1.0 -1.1 hypothetical protein compare
RALBFv3_RS01390 -1.0 -1.2 efflux RND transporter periplasmic adaptor subunit compare
RALBFv3_RS02895 -1.0 -1.2 DUF1178 domain-containing protein compare
RALBFv3_RS10785 -1.0 -3.9 dicarboxylate/amino acid:cation symporter compare
RALBFv3_RS04675 -1.0 -1.5 ABC transporter ATP-binding protein compare
RALBFv3_RS03845 -1.0 -0.7 4-carboxymuconolactone decarboxylase compare
RALBFv3_RS02185 -1.0 -0.5 transcription elongation factor GreA compare
RALBFv3_RS20900 -1.0 -2.9 TetR/AcrR family transcriptional regulator compare
RALBFv3_RS03340 -1.0 -1.7 serine/threonine-protein phosphatase compare
RALBFv3_RS15640 -1.0 -1.2 membrane protein compare
RALBFv3_RS07465 -1.0 -0.8 hypothetical protein compare
RALBFv3_RS11165 -1.0 -2.5 ribosomal subunit interface protein compare
RALBFv3_RS24515 -1.0 -0.9 hypothetical protein compare
RALBFv3_RS18650 -1.0 -2.5 LacI family transcriptional regulator compare
RALBFv3_RS01550 -1.0 -1.0 hypothetical protein compare
RALBFv3_RS08655 -1.0 -2.3 glycine cleavage system protein H compare
RALBFv3_RS08895 -1.0 -1.9 membrane protein compare
RALBFv3_RS05485 -1.0 -2.0 lactate dehydrogenase compare
RALBFv3_RS13670 -1.0 -6.4 sel1 repeat family protein compare
RALBFv3_RS15485 -1.0 -0.7 amino-acid N-acetyltransferase compare
RALBFv3_RS14350 -1.0 -1.3 hypothetical protein compare
RALBFv3_RS05390 -1.0 -0.9 histidine ammonia-lyase compare
RALBFv3_RS17215 -1.0 -1.5 ABC transporter ATP-binding protein compare
RALBFv3_RS19520 -1.0 -1.1 type III secretion protein HrpB7 compare
RALBFv3_RS10470 -1.0 -1.9 enoyl-CoA hydratase compare
RALBFv3_RS13960 -1.0 -1.3 DUF615 domain-containing protein compare
RALBFv3_RS23380 -1.0 -4.1 hypothetical protein compare
RALBFv3_RS21285 -1.0 -3.8 two-component sensor histidine kinase compare
RALBFv3_RS11605 -1.0 -1.7 OsmC family protein compare
RALBFv3_RS24220 -1.0 -1.3 hypothetical protein compare
RALBFv3_RS10070 -0.9 -3.1 polyphosphate kinase 2 family protein compare


Specific Phenotypes

For 1 genes in this experiment

For in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted in Ralstonia solanacearum IBSBF1503

For in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted across organisms