Experiment set9IT066 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Gossypetin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0034 -3.0 -5.3 tryptophan synthase, beta chain compare
Psyr_4687 -2.9 -11.4 biotin synthase compare
Psyr_4683 -2.9 -7.1 dethiobiotin synthase compare
Psyr_4341 -2.8 -9.0 thiamine-phosphate diphosphorylase compare
Psyr_4340 -2.8 -9.8 phosphomethylpyrimidine kinase, putative compare
Psyr_4740 -2.7 -8.3 thiazole-phosphate synthase compare
Psyr_0951 -2.6 -3.5 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4203 -2.4 -2.2 SsrA-binding protein compare
Psyr_1544 -2.4 -5.6 SirA-like protein compare
Psyr_0835 -2.3 -7.9 transcriptional regulator, TraR/DksA family compare
Psyr_4091 -2.3 -5.2 8-oxo-dGTPase compare
Psyr_3193 -2.3 -4.2 Transcription factor jumonji, jmjC compare
Psyr_0033 -2.2 -3.5 tryptophan synthase, alpha chain compare
Psyr_2980 -2.1 -4.6 UDP-glucose pyrophosphorylase compare
Psyr_3419 -2.1 -5.9 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_5132 -2.1 -4.8 Glucose-inhibited division protein A subfamily compare
Psyr_4627 -2.0 -3.4 dimethyladenosine transferase compare
Psyr_0454 -2.0 -6.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3020 -1.9 -3.0 precorrin-4 C11-methyltransferase compare
Psyr_0475 -1.8 -3.7 Protein of unknown function YGGT compare
Psyr_5072 -1.8 -1.9 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_2245 -1.7 -3.1 conserved domain protein compare
Psyr_1613 -1.7 -4.8 septum site-determining protein MinC compare
Psyr_0571 -1.7 -4.4 tRNA isopentenyltransferase compare
Psyr_1408 -1.7 -3.0 Holliday junction endonuclease RuvC compare
Psyr_1953 -1.7 -1.7 conserved hypothetical protein compare
Psyr_4686 -1.7 -6.6 8-amino-7-oxononanoate synthase compare
Psyr_0487 -1.7 -3.0 glutathione synthase compare
Psyr_4350 -1.6 -3.8 Protein of unknown function DUF218 compare
Psyr_0383 -1.6 -1.4 Twin-arginine translocation protein TatB compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_4684 -1.5 -2.9 biotin synthesis protein BioC compare
Psyr_0574 -1.5 -5.0 protease FtsH subunit HflK compare
Psyr_1747 -1.5 -3.3 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_4519 -1.3 -5.3 General substrate transporter:Major facilitator superfamily compare
Psyr_3601 -1.3 -2.2 conserved hypothetical protein compare
Psyr_0529 -1.3 -3.3 Glycosyl transferase, group 1 compare
Psyr_4582 -1.3 -1.5 hypothetical protein compare
Psyr_1910 -1.3 -4.3 VacJ-like lipoprotein compare
Psyr_0826 -1.2 -5.5 glucose-6-phosphate isomerase compare
Psyr_1371 -1.2 -6.4 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_4194 -1.2 -3.9 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_4139 -1.2 -4.9 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_4362 -1.2 -2.5 Rare lipoprotein A compare
Psyr_0845 -1.2 -1.8 conserved hypothetical protein compare
Psyr_3886 -1.2 -2.2 methionyl-tRNA synthetase compare
Psyr_5133 -1.2 -3.9 tRNA modification GTPase trmE compare
Psyr_3357 -1.1 -2.2 transcriptional regulator, LysR family compare
Psyr_3013 -1.1 -1.7 magnesium chelatase subunit ChlD compare
Psyr_2386 -1.1 -2.6 hypothetical protein compare
Psyr_4089 -1.1 -4.0 PAS compare
Psyr_3257 -1.1 -3.3 multisubunit potassium/proton antiporter, PhaG subunit compare
Psyr_4262 -1.1 -1.1 lipoprotein, putative compare
Psyr_1373 -1.1 -2.1 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3854 -1.1 -1.1 OmpA/MotB compare
Psyr_3107 -1.1 -2.4 conserved hypothetical protein compare
Psyr_4622 -1.1 -2.8 Nucleotidyl transferase compare
Psyr_0255 -1.1 -2.3 glutamate-cysteine ligase compare
Psyr_0385 -1.1 -2.4 phosphoribosyl-ATP pyrophosphatase compare
Psyr_2591 -1.0 -3.7 transport system permease protein compare
Psyr_1751 -1.0 -3.4 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_1236 -1.0 -3.4 transcriptional regulator, BadM/Rrf2 family compare
Psyr_3450 -1.0 -2.6 Hpt compare
Psyr_0202 -1.0 -4.8 transcriptional regulator, LysR family compare
Psyr_4995 -1.0 -3.0 RHS protein compare
Psyr_4460 -0.9 -1.6 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1688 -0.9 -1.4 Protein of unknown function DUF1315 compare
Psyr_1410 -0.9 -3.1 Holliday junction DNA helicase RuvB compare
Psyr_3115 -0.9 -2.3 Glycerate kinase compare
Psyr_1816 -0.9 -2.7 transcriptional regulator, GntR family compare
Psyr_3791 -0.9 -2.3 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_0531 -0.9 -2.6 LmbE-like protein compare
Psyr_3904 -0.9 -4.6 Major intrinsic protein compare
Psyr_4566 -0.9 -5.8 Peptidase M23B compare
Psyr_3427 -0.9 -1.8 conserved hypothetical protein compare
Psyr_3644 -0.9 -2.5 prephenate dehydrogenase compare
Psyr_3627 -0.9 -1.8 OsmC-like protein compare
Psyr_4682 -0.9 -1.8 conserved hypothetical protein compare
Psyr_1670 -0.9 -2.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_1017 -0.9 -1.8 type III effector HopJ1 compare
Psyr_1968 -0.9 -1.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4158 -0.9 -5.1 conserved hypothetical protein compare
Psyr_3031 -0.9 -2.2 Thiolase compare
Psyr_1404 -0.9 -4.6 Ferritin and Dps compare
Psyr_2468 -0.9 -2.6 Enoyl-CoA hydratase/isomerase compare
Psyr_2180 -0.9 -1.7 transcriptional regulator, LysR family compare
Psyr_4874 -0.9 -1.5 ABC transporter compare
Psyr_2973 -0.9 -1.4 Glyoxalase I compare
Psyr_0917 -0.9 -5.5 ABC-2 compare
Psyr_2300 -0.9 -4.2 Conserved hypothetical protein 374 compare
Psyr_2897 -0.8 -3.1 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0085 -0.8 -3.4 conserved hypothetical protein compare
Psyr_1765 -0.8 -3.3 GCN5-related N-acetyltransferase compare
Psyr_3674 -0.8 -2.1 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_3698 -0.8 -3.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_4144 -0.8 -1.5 Protein of unknown function DUF1239 compare
Psyr_1277 -0.8 -1.1 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_2788 -0.8 -2.9 hypothetical protein compare
Psyr_0532 -0.8 -3.3 conserved hypothetical protein compare
Psyr_3179 -0.8 -1.4 DNA translocase FtsK compare
Psyr_0281 -0.8 -1.9 ABC transporter compare
Psyr_2137 -0.8 -1.8 molybdopterin molybdochelatase compare
Psyr_1418 -0.8 -1.7 Radical SAM compare
Psyr_0811 -0.8 -4.0 Integral membrane protein TerC compare
Psyr_4882 -0.8 -3.5 protein translocase subunit secB compare
Psyr_2855 -0.8 -2.7 methionine synthase (B12-independent) compare
Psyr_3015 -0.8 -3.5 cobaltochelatase CobN subunit compare
Psyr_0393 -0.8 -2.4 Protein of unknown function DUF971 compare
Psyr_2582 -0.8 -4.6 TonB-dependent siderophore receptor compare
Psyr_3776 -0.8 -3.5 Cytosine deaminase compare
Psyr_4115 -0.8 -1.6 phosphoheptose isomerase compare
Psyr_1963 -0.8 -3.1 Cyclic peptide transporter compare
Psyr_1588 -0.8 -2.0 Putative exonuclease, RdgC compare
Psyr_2231 -0.8 -2.3 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_4897 -0.8 -2.0 imidazoleglycerol-phosphate dehydratase compare
Psyr_4300 -0.8 -2.4 DNA polymerase III, epsilon subunit compare
Psyr_1796 -0.8 -1.7 GCN5-related N-acetyltransferase compare
Psyr_4418 -0.8 -1.9 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4730 -0.8 -1.8 FecR protein compare
Psyr_2264 -0.7 -1.1 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_0576 -0.7 -1.8 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_4138 -0.7 -2.2 Toluene tolerance compare
Psyr_1907 -0.7 -1.6 GTP cyclohydrolase I compare
Psyr_0549 -0.7 -1.3 Metallophosphoesterase compare
Psyr_1663 -0.7 -1.9 phosphoribosylanthranilate isomerase compare
Psyr_5067 -0.7 -2.7 conserved hypothetical protein compare
Psyr_1614 -0.7 -0.8 lipid A biosynthesis acyltransferase compare
Psyr_0918 -0.7 -5.7 ABC transporter compare
Psyr_4967 -0.7 -2.5 conserved hypothetical protein compare
Psyr_0936 -0.7 -5.4 Glycosyl transferase, group 1 compare
Psyr_2854 -0.7 -3.0 conserved hypothetical protein compare
Psyr_3954 -0.7 -2.4 GTP-binding protein LepA compare
Psyr_2708 -0.7 -2.2 Rieske [2Fe-2S] region compare
Psyr_4752 -0.7 -2.8 Insulinase-like:Peptidase M16, C-terminal compare
Psyr_1791 -0.7 -2.0 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_4183 -0.7 -1.1 protein translocase subunit secG compare
Psyr_1530 -0.7 -1.3 hypothetical protein compare
Psyr_2228 -0.7 -2.4 conserved hypothetical protein compare
Psyr_1515 -0.7 -2.3 hypothetical protein compare
Psyr_2872 -0.7 -1.2 hypothetical protein compare
Psyr_0603 -0.7 -2.9 N-acylglucosamine 2-epimerase compare
Psyr_1419 -0.7 -2.1 preQ(0) biosynthesis protein QueC compare
Psyr_0735 -0.7 -1.4 Peptidase S24, S26A and S26B compare
Psyr_1594 -0.7 -2.2 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_2088 -0.7 -0.9 2-methylaconitate cis-trans isomerase compare
Psyr_3282 -0.7 -2.8 transcriptional regulator, TetR family compare
Psyr_2588 -0.7 -0.8 HpcH/HpaI aldolase compare
Psyr_4822 -0.7 -2.0 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_4455 -0.7 -2.1 conserved hypothetical protein compare
Psyr_5065 -0.7 -4.3 ATP-dependent DNA helicase UvrD compare
Psyr_1251 -0.7 -2.0 quinoprotein compare
Psyr_2514 -0.7 -2.0 ABC transporter compare
Psyr_2227 -0.7 -1.0 conserved hypothetical protein compare
Psyr_4512 -0.7 -3.0 putative phage-related protein compare
Psyr_2755 -0.7 -2.3 2-nitropropane dioxygenase, NPD compare
Psyr_0377 -0.7 -3.4 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_0199 -0.7 -2.4 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_1372 -0.7 -2.4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_4361 -0.7 -2.1 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_2557 -0.7 -1.4 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_0565 -0.7 -2.6 Protein of unknown function UPF0126 compare
Psyr_4581 -0.7 -1.3 anthranilate synthase, component II compare
Psyr_2350 -0.6 -1.4 Protein of unknown function UPF0025 compare
Psyr_0959 -0.6 -2.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_2592 -0.6 -1.9 transport system permease protein compare
Psyr_3727 -0.6 -2.4 conserved hypothetical protein compare
Psyr_3934 -0.6 -1.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_1227 -0.6 -1.3 Queuosine biosynthesis protein compare
Psyr_1949 -0.6 -1.9 ABC-3 compare
Psyr_4660 -0.6 -1.7 Formate/nitrite transporter compare
Psyr_0849 -0.6 -4.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4316 -0.6 -2.5 conserved hypothetical protein compare
Psyr_2305 -0.6 -2.4 Natural resistance-associated macrophage protein compare
Psyr_0364 -0.6 -2.3 sodium/proton antiporter, NhaA family compare
Psyr_2840 -0.6 -2.4 hypothetical protein compare
Psyr_0444 -0.6 -0.8 Malonate decarboxylase delta subunit compare
Psyr_1748 -0.6 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3665 -0.6 -1.9 conserved hypothetical protein compare
Psyr_0445 -0.6 -1.8 malonate decarboxylase, beta subunit compare
Psyr_4580 -0.6 -1.8 anthranilate phosphoribosyltransferase compare
Psyr_0215 -0.6 -4.1 Exodeoxyribonuclease III xth compare
Psyr_0291 -0.6 -2.6 DedA compare
Psyr_1449 -0.6 -2.0 hypothetical protein compare
Psyr_1154 -0.6 -1.8 Copper/Zinc superoxide dismutase compare
Psyr_3208 -0.6 -1.2 NADH dehydrogenase subunit M compare
Psyr_3014 -0.6 -1.7 protoporphyrin IX magnesium-chelatase compare
Psyr_5029 -0.6 -1.2 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_4335 -0.6 -1.7 transcriptional regulator, AsnC family compare
Psyr_4141 -0.6 -2.0 ABC transporter compare
Psyr_0263 -0.6 -2.4 Two-component response regulator AlgB compare
Psyr_0070 -0.6 -1.0 hypothetical protein compare
Psyr_1111 -0.6 -0.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0372 -0.6 -1.7 CDS compare
Psyr_1067 -0.6 -1.3 GTP cyclohydrolase subunit MoaC compare
Psyr_1095 -0.6 -2.4 Glycine cleavage system T protein compare
Psyr_3691 -0.6 -2.9 conserved hypothetical protein compare
Psyr_0303 -0.6 -1.6 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_0579 -0.6 -3.7 RNAse R compare
Psyr_2309 -0.6 -2.1 conserved hypothetical protein compare
Psyr_4618 -0.6 -1.4 regulatory protein, LuxR:Response regulator receiver compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Gossypetin across organisms