Experiment set9IT066 for Sinorhizobium meliloti 1021

Compare to:

Sodium Fumarate dibasic carbon source

200 most important genes:

  gene name fitness t score description  
SMc01494 -7.3 -12.2 phosphoserine phosphatase compare
SMc02572 -7.1 -5.5 imidazole glycerol phosphate synthase subunit HisH compare
SMc04026 -7.0 -6.8 glutamate synthase compare
SMc00917 -6.9 -4.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02569 -6.9 -4.8 imidazole glycerol phosphate synthase subunit HisF compare
SMc02123 -6.8 -3.8 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02766 -6.8 -17.1 tryptophan synthase subunit beta compare
SMc04045 -6.7 -6.5 dihydroxy-acid dehydratase compare
SMc01843 -6.7 -10.2 5,10-methylenetetrahydrofolate reductase compare
SMc00993 -6.7 -8.0 phosphoribosylamine--glycine ligase compare
SMc04405 -6.4 -7.7 3-isopropylmalate dehydrogenase compare
SMa1635 -6.3 -2.5 hypothetical protein compare
SMc01028 -6.2 -11.2 phosphopyruvate hydratase compare
SMc00235 -6.2 -8.4 anthranilate phosphoribosyltransferase compare
SMc00494 -6.0 -2.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00640 -6.0 -7.1 phosphoserine aminotransferase compare
SMc02899 -6.0 -11.5 prephenate dehydratase compare
SMc03776 -6.0 -4.1 gamma-glutamyl kinase compare
SMc01801 -5.9 -3.9 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02765 -5.8 -13.0 tryptophan synthase subunit alpha compare
SMc02217 -5.8 -5.6 O-succinylhomoserine sulfhydrylase compare
SMc00236 -5.7 -7.0 Indole-3-glycerol phosphate synthase compare
SMc00918 -5.6 -7.9 ATP phosphoribosyltransferase regulatory subunit compare
SMc02767 -5.5 -8.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc03112 -5.5 -18.0 B12-dependent methionine synthase compare
SMc00131 -5.5 -16.6 transcriptional regulator compare
SMc02717 -5.5 -13.7 2-isopropylmalate synthase compare
SMc02124 -5.5 -13.2 nitrite reductase compare
SMc01431 -5.3 -15.0 acetolactate synthase 3 catalytic subunit compare
SMc04028 -5.3 -17.4 glutamate synthase compare
SMc02562 -5.3 -8.1 phosphoenolpyruvate carboxykinase compare
SMc00488 -5.3 -18.0 phosphoribosylformylglycinamidine synthase II compare
SMc02137 -5.3 -3.6 ornithine carbamoyltransferase compare
SMc02838 -5.2 -6.3 phosphoglyceromutase compare
SMc00092 -5.1 -13.2 phosphoadenosine phosphosulfate reductase compare
SMc03979 -5.1 -3.5 glyceraldehyde-3-phosphate dehydrogenase compare
SMc03981 -5.0 -4.6 phosphoglycerate kinase compare
SMc02725 -5.0 -13.7 anthranilate synthase compare
SM_b20611 -5.0 -14.6 C4-dicarboxylate transporter DctA conserved
SMc04002 -5.0 -7.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00091 -4.9 -13.4 sulfate adenylyltransferase compare
SM_b20612 -4.9 -9.9 C4-dicarboxylate transport sensor protein conserved
SMc00090 -4.9 -8.3 sulfate adenylyltransferase compare
SMc00293 -4.8 -10.6 homoserine dehydrogenase compare
SMc01726 -4.8 -4.9 acetylglutamate kinase compare
SM_b20613 -4.8 -8.1 C4-dicarboxylate transport transcriptional regulator compare
SMc03777 -4.8 -8.0 gamma-glutamyl phosphate reductase compare
SMc03797 -4.8 -8.7 homoserine O-succinyltransferase compare
SMc00615 -4.7 -8.8 phosphoribosylaminoimidazole synthetase compare
SMc01004 -4.6 -9.4 phosphoribosyl-AMP cyclohydrolase compare
SMc04088 -4.6 -11.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01054 -4.6 -6.2 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc02245 -4.6 -5.5 dihydroorotate dehydrogenase 2 compare
SMc02570 -4.6 -6.2 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00554 -4.5 -8.7 amidophosphoribosyltransferase compare
SMc04001 -4.5 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc03823 -4.4 -11.0 isopropylmalate isomerase large subunit compare
SMc03069 -4.3 -2.8 6-phosphogluconolactonase compare
SMc01139 -4.3 -5.5 RNA polymerase factor sigma-54 compare
SM_b21177 -4.3 -10.2 phosphate uptake ABC transporter ATP-binding protein compare
SMc02138 -4.2 -5.5 acetylornithine transaminase compare
SMc00614 -4.2 -7.7 phosphoribosylglycinamide formyltransferase compare
SMc00495 -4.1 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SM_b21175 -4.0 -5.2 phosphate uptake ABC transporter permease compare
SMc02307 -4.0 -7.2 histidinol dehydrogenase compare
SMc00493 -3.9 -7.1 phosphoribosylformylglycinamidine synthase I compare
SMc02165 -3.9 -7.1 orotate phosphoribosyltransferase compare
SM_b21174 -3.9 -3.7 phosphate uptake ABC transporter permease compare
SMc03795 -3.9 -2.1 isopropylmalate isomerase small subunit compare
SMc02755 -3.8 -5.2 S-adenosyl-L-homocysteine hydrolase compare
SMc02166 -3.7 -9.3 dihydroorotase compare
SMc02574 -3.7 -5.7 imidazoleglycerol-phosphate dehydratase compare
SMc00294 -3.7 -11.6 aminotransferase compare
SMc00412 -3.7 -5.5 orotidine 5'-phosphate decarboxylase compare
SMc01770 -3.6 -1.7 serine hydroxymethyltransferase compare
SMc00017 -3.5 -1.8 homoserine kinase compare
SMc01053 -3.5 -5.0 siroheme synthase compare
SMc00711 -3.4 -4.3 cyclohexadienyl dehydrogenase compare
SMc03100 -3.3 -2.1 hypothetical protein compare
SMc04346 -3.3 -4.8 ketol-acid reductoisomerase compare
SMc02246 -3.2 -1.2 hypothetical protein compare
SMc01206 -3.2 -1.6 queuine tRNA-ribosyltransferase compare
SMc00876 -3.1 -3.0 ATP-binding MRP protein compare
SMc01881 -3.1 -2.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00726 -3.0 -1.1 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01360 -3.0 -2.8 aspartate carbamoyltransferase catalytic subunit compare
SMc00982 -2.8 -7.2 dioxygenase compare
SMc02707 -2.8 -4.0 hypothetical protein compare
SMc00013 -2.7 -2.4 cytochrome C oxidase subunit III transmembrane protein compare
SMc00712 -2.7 -1.9 hypothetical protein compare
SMc01430 -2.7 -5.0 acetolactate synthase 3 regulatory subunit compare
SM_b21176 -2.7 -5.3 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc02858 -2.5 -1.0 chaperone protein DnaJ compare
SMc00641 -2.4 -3.4 D-3-phosphoglycerate dehydrogenase compare
SMc02983 -2.3 -7.9 ornithine, DAP, or arginine decarboxylase compare
SMc02641 -2.3 -2.2 UDP-glucose 6-dehydrogenase compare
SMc01361 -2.2 -2.5 dihydroorotase compare
SMc01440 -2.2 -6.2 hydrolase serine protease transmembrane protein compare
SMc01880 -2.1 -1.4 pantoate--beta-alanine ligase compare
SMc00987 -2.1 -2.4 hypothetical protein compare
SMc03978 -2.1 -1.4 transketolase compare
SMc02640 -1.8 -4.4 UDP-glucuronic acid epimerase compare
SMc02975 -1.7 -5.8 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SM_b20320 -1.7 -1.8 TRAP-type large permease component compare
SMc04454 -1.7 -5.4 ABC transporter ATP-binding protein compare
SMc00169 -1.7 -11.7 malic enzyme compare
SMc01441 -1.7 -4.2 membrane bound protease compare
SMc02055 -1.6 -2.0 phytoene synthase compare
SMc00761 -1.5 -8.3 oxidoreductase compare
SMc01220 -1.4 -4.1 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc04003 -1.4 -1.4 50S ribosomal protein L36 compare
SMc01578 -1.4 -6.5 aspartate aminotransferase compare
SMc00302 -1.4 -1.4 hypothetical protein compare
SMc02724 -1.4 -3.0 hypothetical protein compare
SMc00012 -1.4 -1.4 cytochrome C oxidase assembly protein compare
SMc02145 -1.3 -0.7 signal peptide protein compare
SMc00619 -1.3 -1.2 hypothetical protein compare
SMc01124 -1.3 -5.8 PII uridylyl-transferase compare
SMc01207 -1.3 -1.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc03763 -1.3 -0.9 cytosine-specific methyltransferase compare
SMc01089 -1.3 -1.3 hypothetical protein compare
SM_b20701 -1.3 -1.1 hypothetical protein compare
SMc01012 -1.3 -1.3 hypothetical protein compare
SMc03850 -1.2 -0.6 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b20021 -1.2 -1.1 transcriptional regulator compare
SMc04000 -1.2 -0.9 hypothetical protein compare
SMc00580 -1.2 -2.1 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMa0886 -1.2 -1.2 hypothetical protein compare
SMc00815 -1.2 -0.7 inosine 5'-monophosphate dehydrogenase compare
SMc01097 -1.2 -3.5 hypothetical protein compare
SMc02909 -1.1 -1.2 transglycosylase transmembrane protein compare
SMc02753 -1.1 -0.7 PTS system transporter subunit IIA compare
SMc02695 -1.1 -4.1 GTP-dependent nucleic acid-binding protein EngD compare
SMc01368 -1.0 -4.3 transport transmembrane protein compare
SMc02058 -1.0 -1.6 YAJC protein compare
SMc03135 -1.0 -1.6 amino-acid transport system ATP-binding ABC transporter protein compare
SMc00981 -1.0 -4.3 ferredoxin protein compare
SMc02234 -1.0 -1.4 hypothetical protein compare
SMc00369 -1.0 -1.1 oxidoreductase compare
SMa2215 -0.9 -2.6 GntR family transcriptional regulator compare
SMc00349 -0.9 -4.9 GTP-binding protein LepA compare
SMc02407 -0.9 -4.1 hypothetical protein compare
SMc00656 -0.9 -0.9 hypothetical protein compare
SMc00353 -0.9 -1.4 transmembrane protein compare
SMc00450 -0.9 -0.8 protoheme IX farnesyltransferase compare
SMc02048 -0.9 -3.4 glycine cleavage system protein H compare
SMc02425 -0.9 -2.5 transcriptional regulator compare
SMc00760 -0.9 -1.9 recombinase A compare
SMa0222 -0.9 -1.0 GntR family transcriptional regulator compare
SMc00378 -0.9 -1.8 exodeoxyribonuclease VII large subunit compare
SMc03993 -0.9 -2.4 hypothetical protein compare
SM_b20948 -0.9 -1.1 glucosyltransferase compare
SMc00762 -0.9 -4.8 glutamine synthetase compare
SMc00569 -0.9 -1.8 hypothetical protein compare
SMc01364 -0.8 -0.8 DNA topoisomerase I compare
SMc01877 -0.8 -2.7 DNA repair protein compare
SMc01042 -0.8 -3.1 nitrogen regulation protein compare
SMc04330 -0.8 -1.0 trimethylamine methyltransferase compare
SM_b20953 -0.8 -0.9 hypothetical protein compare
SM_b20387 -0.8 -0.6 transcriptional regulator compare
SMa1639 -0.8 -1.1 hypothetical protein compare
SMc03980 -0.8 -3.1 hypothetical protein compare
SMc00010 -0.8 -1.0 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02050 -0.8 -2.4 trigger factor compare
SMa1921 -0.8 -1.8 hypothetical protein compare
SM_b21591 -0.8 -1.1 GntR family transcriptional regulator compare
SMc01858 -0.8 -1.0 S-adenosyl-methyltransferase MraW compare
SMc01800 -0.8 -0.5 cytochrome C oxidase assembly transmembrane protein compare
SMc00555 -0.8 -1.0 colicin V production transmembrane protein compare
SMc02683 -0.8 -1.4 hypothetical protein compare
SMc03153 -0.8 -1.9 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc01842 -0.8 -0.8 methyltransferase transcription regulator protein compare
SM_b20026 -0.8 -1.5 hypothetical protein compare
SMc02860 -0.8 -1.5 hypothetical protein compare
SMc00667 -0.8 -1.5 hypothetical protein compare
SMc01043 -0.8 -3.9 nitrogen assimilation regulatory protein compare
SMc03229 -0.8 -0.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00566 -0.8 -1.7 hypothetical protein compare
SMa1365 -0.7 -1.2 ATP-binding protein compare
SMc01454 -0.7 -5.1 hypothetical protein compare
SMc02047 -0.7 -2.8 glycine cleavage system aminomethyltransferase T compare
SMc01852 -0.7 -3.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SM_b21108 -0.7 -2.7 L-fucose mutarotase (EC 5.1.3.29) (from data) compare
SMc03028 -0.7 -1.4 flagellar basal body rod protein FlgC compare
SMc03835 -0.7 -1.7 2'-5' RNA ligase compare
SMc02051 -0.7 -1.9 hypothetical protein compare
SMc01518 -0.7 -2.1 hypothetical protein compare
SMc01146 -0.7 -1.8 deoxyribonucleotide triphosphate pyrophosphatase compare
SMc02713 -0.7 -1.3 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc03826 -0.7 -0.5 argininosuccinate synthase compare
SMc04348 -0.7 -0.6 transcriptional regulator compare
SMc02112 -0.7 -3.4 hypothetical protein compare
SMc02723 -0.7 -3.3 7-cyano-7-deazaguanine reductase compare
SMc00914 -0.7 -1.4 oxidoreductase compare
SMc02786 -0.7 -4.6 translocase transmembrane protein compare
SMc01178 -0.7 -1.3 multidrug transmembrane resistance signal peptide protein compare
SMc03127 -0.7 -0.9 ABC transporter permease compare
SMc00856 -0.7 -0.7 hypothetical protein compare
SMc00286 -0.7 -1.4 hemolysin-type calcium-binding protein compare
SMc02173 -0.7 -1.8 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium Fumarate dibasic in Sinorhizobium meliloti 1021

For carbon source Sodium Fumarate dibasic across organisms