Experiment set9IT066 for Sinorhizobium meliloti 1021

Compare to:

Sodium Fumarate dibasic carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc00588 +1.4 3.2 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc03184 +1.3 1.5 PH adaptation potassium efflux system G transmembrane protein compare
SMc00976 +1.2 3.4 enoyl-CoA hydratase compare
SMc00492 +1.1 1.0 hypothetical protein compare
SMa1770 +1.1 1.8 hypothetical protein compare
SMc01315 +1.1 1.8 hypothetical protein compare
SMc00650 +1.0 1.4 hypothetical protein compare
SMc02510 +1.0 0.9 ferric uptake regulation protein compare
SMa0748 +1.0 2.2 MucR family transcriptional regulator compare
SMc02052 +0.9 1.4 hypothetical protein compare
SMc00352 +0.9 1.8 acetyltransferase compare
SMa0955 +0.9 1.4 GntR family transcriptional regulator compare
SMc00963 +0.9 1.7 hypothetical protein compare
SM_b21689 +0.9 3.5 hypothetical protein compare
SMc02338 +0.9 1.2 periplasmic binding ABC transporter protein compare
SM_b20105 +0.9 1.7 transcriptional regulator compare
SMc00045 +0.9 1.9 cytochrome C signal peptide protein compare
SMa0431 +0.9 1.8 hypothetical protein compare
SMa1161 +0.9 2.6 hypothetical protein compare
SM_b21170 +0.8 3.3 guanylate kinase compare
SMa2168 +0.8 1.4 tRNA-Met compare
SMa0753 +0.8 0.8 hypothetical protein compare
SMa1630 +0.8 2.1 hypothetical protein compare
SMc03967 +0.8 0.6 Holliday junction resolvase compare
SM_b20553 +0.8 2.4 hypothetical protein compare
SMc01428 +0.8 2.0 cold shock transcription regulator protein compare
SMc02114 +0.8 2.2 hypothetical protein compare
SMc00167 +0.8 4.7 signal peptide protein compare
SMc02693 +0.8 0.9 peptidyl-tRNA hydrolase compare
SMc00425 +0.8 1.6 transcriptional regulator compare
SMc00427 +0.7 1.2 peptide chain release factor RF-3 protein compare
SMc04043 +0.7 4.1 hypothetical protein compare
SM_b20086 +0.7 1.3 hypothetical protein compare
SMa0211 +0.7 1.3 hypothetical protein compare
SM_b21173 +0.7 1.1 hypothetical protein compare
SMc04296 +0.7 0.4 cell division protein FtsZ compare
SM_b21669 +0.7 1.8 hypothetical protein compare
SMa5011 +0.7 1.4 oxidoreductase compare
SMc03899 +0.7 0.9 hypothetical protein compare
SMc04232 +0.7 1.5 glycine rich transmembrane protein compare
SM_b21329 +0.7 1.5 hypothetical protein compare
SMc00605 +0.7 0.9 hypothetical protein compare
SMa1153 +0.7 2.1 hypothetical protein compare
SMc00806 +0.7 1.8 hypothetical protein compare
SMa1136 +0.6 1.5 hypothetical protein compare
SMc01275 +0.6 4.2 ribosomal large subunit pseudouridine synthase C protein compare
SMa1111 +0.6 2.0 hypothetical protein compare
SMa0789 +0.6 1.9 GntR family transcriptional regulator compare
SMa0838 +0.6 1.2 SyrA protein involved in EPS production compare
SM_b21286 +0.6 2.6 xanthine dehydrogenase compare
SMc01347 +0.6 2.0 hypothetical protein compare
SMc02729 +0.6 4.4 hypothetical protein compare
SM_b20075 +0.6 0.9 hypothetical protein compare
SM_b20270 +0.6 2.0 proline racemase compare
SMc00174 +0.6 3.5 hypothetical protein compare
SMc02718 +0.6 1.4 hypothetical protein compare
SMc02730 +0.6 2.6 hypothetical protein compare
SMa1780 +0.6 2.8 hypothetical protein compare
SMc00521 +0.6 1.6 hypothetical protein compare
SMc01768 +0.6 3.5 transcriptional regulator compare
SMa5015 +0.6 1.6 hypothetical protein compare
SMa0841 +0.6 2.1 transposase, fragment compare
SMc02381 +0.6 2.2 hypothetical protein compare
SMa5031 +0.6 1.3 hypothetical protein compare
SMc02144 +0.6 1.4 phosphate ABC transporter permease compare
SMa1160 +0.6 2.4 hypothetical protein compare
SMa1149 +0.6 2.4 hypothetical protein compare
SM_b20992 +0.6 2.1 hypothetical protein compare
SMa0645 +0.6 1.3 hypothetical protein compare
SMc04030 +0.6 2.0 hypothetical protein compare
SMc04389 +0.6 1.1 hydroxypyruvate reductase compare
SM_b21485 +0.6 1.7 hypothetical protein compare
SMc02497 +0.5 1.5 hypothetical protein compare
SMc02865 +0.5 1.0 acetyltransferase compare
SMc02308 +0.5 1.9 hypothetical protein compare
SMc01517 +0.5 1.7 hypothetical protein compare
SM_b20883 +0.5 1.1 hypothetical protein compare
SMc01472 +0.5 0.9 50S ribosomal protein L11 methyltransferase compare
SMc02856 +0.5 3.2 penicillin-binding protein compare
SMc02225 +0.5 1.8 hypothetical protein compare
SMc00828 +0.5 2.4 hypothetical protein compare
SM_b21296 +0.5 0.9 hypothetical protein compare
SM_b21096 +0.5 0.8 amino acid transporter ABC transporter ATP-binding protein compare
SMc02280 +0.5 1.1 hypothetical protein compare
SMc02941 +0.5 1.8 hypothetical protein compare
SMc03092 +0.5 1.7 transcriptional regulator compare
SM_b21580 +0.5 0.9 hypothetical protein compare
SM_b21099 +0.5 1.9 hypothetical protein compare
SM_b22001 +0.5 1.1 hypothetical protein compare
SMa0360 +0.5 1.8 transposase compare
SMc02694 +0.5 1.0 ATP-dependent Clp protease adaptor compare
SM_b20031 +0.5 1.5 hypothetical protein compare
SMa1113 +0.5 1.9 hypothetical protein compare
SMc04036 +0.5 2.2 ABC transporter ATP-binding protein compare
SMa1132 +0.5 2.0 hypothetical protein compare
SM_b20549 +0.5 1.5 hypothetical protein compare
SMa1162 +0.5 3.6 hypothetical protein compare
SMc02388 +0.5 1.5 hypothetical protein compare
SMc01847 +0.5 1.4 methyltransferase compare
SMc02697 +0.5 0.9 hypothetical protein compare
SMc01448 +0.5 1.9 hypothetical protein compare
SMc04327 +0.5 0.6 hypothetical protein compare
SMa1174 +0.5 1.1 hypothetical protein compare
SMc02273 +0.5 4.5 fatty acid synthase transmembrane protein compare
SM_b21663 +0.5 1.7 hypothetical protein compare
SM_b20837 +0.5 1.2 hypothetical protein compare
SMc00176 +0.5 3.0 hypothetical protein compare
SMc02655 +0.5 2.1 hypothetical protein compare
SMa1207 +0.5 2.5 Crp family transcriptional regulator compare
SMa1765 +0.5 1.0 hypothetical protein compare
SMa1141 +0.5 2.2 FNR/CRP family transcriptional regulator compare
SMc01577 +0.5 1.1 hypothetical protein compare
SMc01116 +0.5 3.2 acyltransferase transmembrane protein compare
SM_b22005 +0.5 0.8 hypothetical protein compare
SMc02685 +0.5 1.1 hypothetical protein compare
SM_b20303 +0.5 0.8 hypothetical protein compare
SMc02142 +0.5 1.2 phosphate transporter ATP-binding protein compare
SMa0314 +0.5 1.2 hypothetical protein compare
SMc01094 +0.5 2.3 multidrug efflux system transmembrane protein compare
SMc03773 +0.4 1.9 hypothetical protein compare
SMc02272 +0.4 3.3 acyl-transferase transferase compare
SMc01229 +0.4 1.4 acetyltransferase compare
SMa2219 +0.4 1.6 decarboxylase compare
SMa0882 +0.4 0.9 hypothetical protein compare
SMc01262 +0.4 1.8 peptide deformylase compare
SMc02696 +0.4 1.7 hypothetical protein compare
SMc03839 +0.4 0.7 hypothetical protein compare
SMa0166 +0.4 2.3 hypothetical protein compare
SMa1210 +0.4 1.8 nitrogen fixation protein FixH compare
SMc04457 +0.4 2.4 hypothetical protein compare
SMc03941 +0.4 1.1 hypothetical protein compare
SMc00649 +0.4 2.3 tRNA/rRNA methyltransferase compare
SMc00794 +0.4 2.6 two-component response regulator compare
SMa0339 +0.4 1.3 short chain alcohol dehydrogenase-related dehydrogenase compare
SM_b21551 +0.4 0.6 hypothetical protein compare
SMc00134 +0.4 2.5 hypothetical protein compare
SMc02739 +0.4 1.2 glycine betaine transport ATP-binding ABC transporter protein compare
SMa0647 +0.4 1.1 hypothetical protein compare
SM_b21330 +0.4 1.4 hypothetical protein compare
SMc00766 +0.4 1.8 transcriptional regulator compare
SM_b20711 +0.4 0.9 hypothetical protein compare
SMc02084 +0.4 0.4 biopolymer transport transmembrane protein compare
SM_b20760 +0.4 1.3 carbon-phosphorus lyase compare
SMc00730 +0.4 2.8 hypothetical protein compare
SMc02108 +0.4 2.7 hypothetical protein compare
SMc02554 +0.4 1.7 hypothetical protein compare
SMa1894 +0.4 1.0 methionine sulfoxide reductase B compare
SMa0341 +0.4 1.2 hypothetical protein compare
SMc03228 +0.4 0.9 YciI-like protein compare
SMc02850 +0.4 0.6 DNA polymerase I compare
SMc01325 +0.4 2.0 hypothetical protein compare
SMc04436 +0.4 1.5 hypothetical protein compare
SMa1184 +0.4 1.9 NosF ATPase compare
SMc01337 +0.4 0.5 hypothetical protein compare
SMc03876 +0.4 1.4 HEAT shock-like protein compare
SMc01214 +0.4 1.8 zinc-containing alcohol dehydrogenase compare
SMc01468 +0.4 0.8 chemotaxis protein compare
SMc00468 +0.4 2.1 hypothetical protein compare
SM_b21341 +0.4 1.3 hypothetical protein compare
SMc01833 +0.4 1.3 hypothetical protein compare
SMa1808 +0.4 1.1 hypothetical protein compare
SMc00225 +0.4 1.5 trans-aconitate 2-methyltransferase compare
SMc03247 +0.4 2.2 integrase/recombinase compare
SMc02833 +0.4 0.4 penicillin-insensitive murein endopeptidase compare
SMa1310 +0.4 1.4 VirB7-like protein compare
SMc01363 +0.4 0.6 hypothetical protein compare
SMc04237 +0.4 1.8 hypothetical protein compare
SMc01757 +0.4 0.8 hypothetical protein compare
SMc01575 +0.4 3.1 hypothetical protein compare
SMc00565 +0.4 0.6 50S ribosomal protein L9 compare
SMa2253 +0.4 0.8 hypothetical protein compare
SM_b20214 +0.4 2.5 oxidoreductase compare
SMa1240 +0.4 0.5 NapF ferredoxin component of periplasmic nitrate reductase compare
SMc00706 +0.4 1.7 hypothetical protein compare
SMa1979 +0.4 1.7 LysR family transcriptional regulator compare
SMa0575 +0.4 0.8 hypothetical protein compare
SMa1702 +0.4 1.2 hypothetical protein compare
SMc00802 +0.4 0.5 hypothetical protein compare
SMc00589 +0.4 1.6 hypothetical protein compare
SMa1547 +0.4 1.3 protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) compare
SMa0149 +0.4 0.9 transcription elongation factor regulatory protein compare
SMa1146 +0.4 2.6 hypothetical protein compare
SMc00298 +0.4 1.2 methionine aminopeptidase compare
SMc02270 +0.4 2.8 capsular polysaccharide biosynthesis\export transmembrane protein compare
SMc00812 +0.4 0.8 hypothetical protein compare
SMc00382 +0.4 1.7 aminopeptidase compare
SMa1188 +0.4 1.5 NosX accesory protein compare
SMa5021 +0.4 1.1 hypothetical protein compare
SMc03973 +0.4 2.3 hypothetical protein compare
SM_b20030 +0.4 1.6 RNA polymerase sigma factor SigJ compare
SMa1632 +0.4 1.5 LysR family transcriptional regulator compare
SMc00805 +0.4 1.8 hypothetical protein compare
SMc02719 +0.4 0.5 transposase compare
SMc02558 +0.4 1.3 hypothetical protein compare
SM_b20074 +0.4 2.0 hypothetical protein compare
SM_b21495 +0.4 1.5 protease compare
SMc01558 +0.4 1.0 hypothetical protein compare
SMa0846 +0.4 0.6 transposase, fragment compare
SMc02738 +0.4 1.9 glycine betaine transport system permease ABC transporter protein compare
SMa1960 +0.4 1.1 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium Fumarate dibasic in Sinorhizobium meliloti 1021

For carbon source Sodium Fumarate dibasic across organisms