Experiment set9IT066 for Ralstonia sp. UNC404CL21Col

Compare to:

Sodium propionate carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS14950 -6.6 -4.5 acetolactate synthase small subunit compare
ABZR87_RS16745 -6.6 -4.5 methylisocitrate lyase compare
ABZR87_RS13250 -6.4 -4.4 phosphoserine phosphatase SerB compare
ABZR87_RS02565 -6.2 -4.3 glutamate synthase subunit beta compare
ABZR87_RS02155 -5.6 -9.3 anthranilate phosphoribosyltransferase compare
ABZR87_RS20875 -5.5 -8.4 LysR family transcriptional regulator compare
ABZR87_RS05100 -5.5 -5.4 RNA polymerase-binding protein DksA compare
ABZR87_RS09450 -5.3 -9.6 prephenate dehydratase compare
ABZR87_RS20880 -5.0 -11.5 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS11925 -4.9 -18.3 phosphoenolpyruvate synthase compare
ABZR87_RS02570 -4.9 -26.7 glutamate synthase-related protein compare
ABZR87_RS02160 -4.9 -7.1 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS01810 -4.8 -4.6 glutamate 5-kinase compare
ABZR87_RS16740 -4.8 -9.2 2-methylcitrate synthase compare
ABZR87_RS01110 -4.8 -11.5 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS16140 -4.7 -18.4 phosphoenolpyruvate carboxylase compare
ABZR87_RS14505 -4.7 -7.7 phosphoribosylanthranilate isomerase compare
ABZR87_RS14540 -4.7 -8.5 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS05200 -4.6 -21.0 homoserine O-acetyltransferase compare
ABZR87_RS16735 -4.6 -19.3 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
ABZR87_RS09465 -4.6 -8.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS09935 -4.6 -4.4 amino acid aminotransferase compare
ABZR87_RS07360 -4.5 -16.2 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS14490 -4.4 -12.7 tryptophan synthase subunit alpha compare
ABZR87_RS14535 -4.4 -7.7 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS07060 -4.4 -19.1 RNA polymerase factor sigma-54 compare
ABZR87_RS14500 -4.4 -17.7 tryptophan synthase subunit beta compare
ABZR87_RS09445 -4.3 -12.7 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS05170 -4.3 -4.1 acetylglutamate kinase compare
ABZR87_RS14530 -4.3 -11.9 3-isopropylmalate dehydrogenase compare
ABZR87_RS14955 -4.2 -6.5 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS02640 -4.2 -15.0 diaminopimelate decarboxylase compare
ABZR87_RS00835 -4.1 -7.4 argininosuccinate synthase compare
ABZR87_RS16080 -4.1 -4.3 P-II family nitrogen regulator compare
ABZR87_RS16730 -4.1 -6.7 2-methylaconitate cis-trans isomerase PrpF compare
ABZR87_RS02140 -4.0 -19.8 anthranilate synthase component I compare
ABZR87_RS11440 -4.0 -10.5 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS13790 -4.0 -12.7 chorismate synthase compare
ABZR87_RS07380 -4.0 -16.5 FAD/FMN-binding oxidoreductase compare
ABZR87_RS02145 -3.9 -3.7 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS00285 -3.9 -3.8 acetylornithine transaminase compare
ABZR87_RS07665 -3.9 -14.6 aminopeptidase P N-terminal domain-containing protein compare
ABZR87_RS02595 -3.9 -11.3 shikimate kinase compare
ABZR87_RS22970 -3.8 -14.3 cystathionine gamma-synthase family protein compare
ABZR87_RS10565 -3.8 -5.8 cupin domain-containing protein compare
ABZR87_RS08630 -3.8 -11.5 dihydroorotase compare
ABZR87_RS00435 -3.8 -10.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS15440 -3.7 -3.5 ribonuclease G compare
ABZR87_RS05590 -3.6 -2.5 orotate phosphoribosyltransferase compare
ABZR87_RS16660 -3.6 -7.5 helix-turn-helix domain-containing protein compare
ABZR87_RS00210 -3.6 -12.1 nitrite/sulfite reductase compare
ABZR87_RS02590 -3.6 -10.5 3-dehydroquinate synthase compare
ABZR87_RS16170 -3.5 -6.0 argininosuccinate lyase compare
ABZR87_RS00190 -3.5 -12.0 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS16270 -3.5 -2.7 cold-shock protein compare
ABZR87_RS00185 -3.5 -5.7 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS05305 -3.4 -12.0 TetR family transcriptional regulator compare
ABZR87_RS09710 -3.4 -5.2 tRNA-Arg compare
ABZR87_RS16750 -3.3 -11.2 propionate catabolism operon regulatory protein PrpR compare
ABZR87_RS00200 -3.3 -5.2 phosphoadenylyl-sulfate reductase compare
ABZR87_RS00325 -3.2 -3.1 peptidylprolyl isomerase compare
ABZR87_RS10240 -3.2 -3.0 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS06770 -3.1 -8.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS17145 -3.1 -15.2 AMP nucleosidase compare
ABZR87_RS13300 -3.0 -11.3 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS04865 -3.0 -7.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS12785 -2.8 -3.3 endopeptidase La compare
ABZR87_RS04995 -2.8 -3.2 DNA topoisomerase III compare
ABZR87_RS00220 -2.8 -10.6 CysB family HTH-type transcriptional regulator compare
ABZR87_RS10120 -2.7 -3.6 YceD family protein compare
ABZR87_RS01645 -2.7 -6.3 type II 3-dehydroquinate dehydratase compare
ABZR87_RS00355 -2.7 -8.5 quinolinate synthase NadA compare
ABZR87_RS08695 -2.6 -10.2 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS06705 -2.5 -13.8 glutamate--cysteine ligase compare
ABZR87_RS11125 -2.5 -8.4 cell division protein ZapE compare
ABZR87_RS01615 -2.5 -3.9 RNB domain-containing ribonuclease compare
ABZR87_RS12790 -2.4 -5.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS00875 -2.4 -5.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS16125 -2.4 -6.7 heme biosynthesis protein HemY compare
ABZR87_RS00195 -2.3 -3.7 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS13290 -2.3 -3.6 3-ketoacyl-ACP reductase compare
ABZR87_RS14115 -2.3 -2.4 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS10930 -2.3 -3.1 outer membrane protein assembly factor BamB compare
ABZR87_RS10085 -2.3 -2.5 Rne/Rng family ribonuclease compare
ABZR87_RS14360 -2.3 -8.8 acetate--CoA ligase compare
ABZR87_RS16185 -2.3 -3.5 dCTP deaminase compare
ABZR87_RS01675 -2.3 -3.0 carbohydrate kinase family protein compare
ABZR87_RS13475 -2.2 -8.1 PAS domain S-box protein compare
ABZR87_RS07960 -2.2 -14.4 response regulator transcription factor compare
ABZR87_RS06710 -2.2 -12.9 glutathione synthase compare
ABZR87_RS12795 -2.1 -5.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS00205 -2.1 -3.0 DUF934 domain-containing protein compare
ABZR87_RS16250 -2.1 -5.2 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS08625 -2.1 -3.8 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS16960 -2.1 -5.7 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS10400 -2.0 -3.5 hypothetical protein compare
ABZR87_RS11010 -1.8 -3.2 oxidative damage protection protein compare
ABZR87_RS06845 -1.8 -8.7 heme o synthase compare
ABZR87_RS20730 -1.8 -1.9 hypothetical protein compare
ABZR87_RS07955 -1.8 -11.2 sensor histidine kinase compare
ABZR87_RS11390 -1.8 -10.3 PhoH family protein compare
ABZR87_RS00745 -1.8 -2.2 3-hydroxyacyl-CoA dehydrogenase compare
ABZR87_RS06645 -1.8 -2.8 TlpA disulfide reductase family protein compare
ABZR87_RS06395 -1.8 -4.5 response regulator compare
ABZR87_RS09895 -1.7 -1.7 DUF1841 family protein compare
ABZR87_RS09515 -1.7 -1.5 cysteine synthase CysM compare
ABZR87_RS07435 -1.7 -3.9 DUF502 domain-containing protein compare
ABZR87_RS17310 -1.7 -4.1 PadR family transcriptional regulator compare
ABZR87_RS02480 -1.7 -3.5 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS03195 -1.7 -10.6 cation diffusion facilitator family transporter compare
ABZR87_RS02440 -1.7 -7.6 twin-arginine translocase subunit TatC compare
ABZR87_RS20690 -1.7 -1.6 recombinase-like helix-turn-helix domain-containing protein compare
ABZR87_RS00350 -1.7 -5.4 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS18910 -1.7 -2.7 DUF2239 family protein compare
ABZR87_RS13285 -1.7 -9.9 polyhydroxyalkanoate synthesis repressor PhaR compare
ABZR87_RS06495 -1.7 -2.9 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS03075 -1.7 -10.9 AGE family epimerase/isomerase compare
ABZR87_RS06745 -1.7 -6.2 S41 family peptidase compare
ABZR87_RS09460 -1.6 -3.4 prephenate dehydrogenase compare
ABZR87_RS05350 -1.6 -5.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS02380 -1.6 -9.3 cytochrome bc complex cytochrome b subunit compare
ABZR87_RS01605 -1.6 -8.1 shikimate dehydrogenase compare
ABZR87_RS01035 -1.6 -5.3 histidine utilization repressor compare
ABZR87_RS09615 -1.6 -1.3 50S ribosomal protein L19 compare
ABZR87_RS22300 -1.6 -1.4 flagellar biosynthesis anti-sigma factor FlgM compare
ABZR87_RS02575 -1.6 -5.7 transposase compare
ABZR87_RS13175 -1.5 -1.6 tRNA-Leu compare
ABZR87_RS11940 -1.5 -4.1 SsrA-binding protein SmpB compare
ABZR87_RS03780 -1.5 -1.9 thiosulfate oxidation carrier protein SoxY compare
ABZR87_RS02375 -1.5 -7.9 cytochrome c1 compare
ABZR87_RS04785 -1.5 -8.6 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS11815 -1.5 -7.6 [protein-PII] uridylyltransferase compare
ABZR87_RS08700 -1.5 -5.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS10780 -1.5 -4.7 PD-(D/E)XK nuclease family protein compare
ABZR87_RS07625 -1.5 -4.0 Holliday junction branch migration protein RuvA compare
ABZR87_RS04125 -1.5 -6.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS11195 -1.4 -6.8 pseudouridine synthase compare
ABZR87_RS08655 -1.4 -4.2 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS21795 -1.4 -5.0 NUDIX domain-containing protein compare
ABZR87_RS20665 -1.4 -4.8 IclR family transcriptional regulator compare
ABZR87_RS15500 -1.4 -5.6 glycosyltransferase compare
ABZR87_RS08750 -1.3 -4.6 lipopolysaccharide heptosyltransferase I compare
ABZR87_RS08660 -1.3 -4.8 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS14495 -1.3 -3.8 site-specific DNA-methyltransferase compare
ABZR87_RS11760 -1.3 -0.9 membrane protein compare
ABZR87_RS22690 -1.3 -2.8 XRE family transcriptional regulator compare
ABZR87_RS10980 -1.3 -1.1 tRNA-Leu compare
ABZR87_RS02680 -1.3 -8.0 c-type cytochrome compare
ABZR87_RS09625 -1.3 -7.1 CobD/CbiB family protein compare
ABZR87_RS06715 -1.3 -3.2 PTS sugar transporter subunit IIA compare
ABZR87_RS15480 -1.3 -7.8 glycosyltransferase family 25 protein compare
ABZR87_RS02020 -1.2 -8.8 long-chain fatty acid--CoA ligase compare
ABZR87_RS11770 -1.2 -6.1 succinyldiaminopimelate transaminase compare
ABZR87_RS00215 -1.2 -2.5 sulfite exporter TauE/SafE family protein compare
ABZR87_RS07700 -1.2 -2.2 peptidylprolyl isomerase compare
ABZR87_RS19435 -1.2 -2.1 trehalose-phosphatase compare
ABZR87_RS07620 -1.2 -3.7 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS02385 -1.2 -4.8 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS10820 -1.2 -4.3 LysR substrate-binding domain-containing protein compare
ABZR87_RS08680 -1.2 -5.6 glycosyltransferase compare
ABZR87_RS04975 -1.2 -2.0 peptide deformylase compare
ABZR87_RS21245 -1.2 -1.2 1,2-phenylacetyl-CoA epoxidase subunit PaaD compare
ABZR87_RS07950 -1.2 -5.9 sodium/substrate symporter small subunit compare
ABZR87_RS14355 -1.2 -8.6 sodium:solute symporter family protein conserved
ABZR87_RS20490 -1.2 -4.8 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
ABZR87_RS03625 -1.2 -1.9 hypothetical protein compare
ABZR87_RS10785 -1.1 -4.7 exodeoxyribonuclease V subunit beta compare
ABZR87_RS13460 -1.1 -3.9 MFS transporter compare
ABZR87_RS04295 -1.1 -3.2 HU family DNA-binding protein compare
ABZR87_RS11245 -1.1 -3.6 translational GTPase TypA compare
ABZR87_RS02235 -1.1 -5.0 response regulator compare
ABZR87_RS08665 -1.1 -4.7 GNAT family N-acetyltransferase compare
ABZR87_RS10610 -1.1 -1.7 inositol monophosphatase family protein compare
ABZR87_RS00280 -1.1 -5.7 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
ABZR87_RS14575 -1.1 -3.7 GntR family transcriptional regulator compare
ABZR87_RS04310 -1.1 -3.1 2-dehydropantoate 2-reductase compare
ABZR87_RS17650 -1.1 -4.8 TetR/AcrR family transcriptional regulator compare
ABZR87_RS13350 -1.1 -4.1 potassium transporter Kup compare
ABZR87_RS07050 -1.0 -1.2 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS21810 -1.0 -1.9 enoyl-CoA hydratase compare
ABZR87_RS06400 -1.0 -5.2 response regulator transcription factor compare
ABZR87_RS08690 -1.0 -8.2 polysaccharide biosynthesis protein compare
ABZR87_RS22585 -1.0 -1.7 methyl-accepting chemotaxis protein compare
ABZR87_RS09085 -1.0 -5.4 DUF883 family protein compare
ABZR87_RS05145 -1.0 -1.4 copper chaperone PCu(A)C compare
ABZR87_RS01745 -1.0 -2.6 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
ABZR87_RS02445 -1.0 -3.4 Sec-independent protein translocase protein TatB compare
ABZR87_RS09500 -1.0 -2.7 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
ABZR87_RS10170 -1.0 -3.8 RseA family anti-sigma factor compare
ABZR87_RS00385 -1.0 -1.5 response regulator transcription factor compare
ABZR87_RS22915 -1.0 -6.7 glucose-6-phosphate dehydrogenase compare
ABZR87_RS16180 -1.0 -3.3 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS01055 -1.0 -5.7 heat-inducible transcriptional repressor HrcA compare
ABZR87_RS11585 -1.0 -1.9 gamma-glutamylcyclotransferase compare
ABZR87_RS06840 -1.0 -4.8 COX15/CtaA family protein compare
ABZR87_RS15495 -1.0 -7.0 O-antigen ligase family protein compare
ABZR87_RS06800 -1.0 -7.5 cytochrome c oxidase subunit I compare
ABZR87_RS01980 -0.9 -1.7 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS02035 -0.9 -3.4 substrate-binding domain-containing protein compare
ABZR87_RS08730 -0.9 -8.2 nucleoside-diphosphate sugar epimerase/dehydratase compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium propionate in Ralstonia sp. UNC404CL21Col

For carbon source Sodium propionate across organisms