Experiment set9IT065 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Solanesol 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4740 -3.6 -8.4 thiazole-phosphate synthase compare
Psyr_0034 -3.6 -2.5 tryptophan synthase, beta chain compare
Psyr_4340 -3.5 -12.4 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -3.3 -5.3 SirA-like protein compare
Psyr_4341 -3.2 -8.6 thiamine-phosphate diphosphorylase compare
Psyr_4686 -3.0 -9.0 8-amino-7-oxononanoate synthase compare
Psyr_4687 -2.8 -11.2 biotin synthase compare
Psyr_4091 -2.6 -5.0 8-oxo-dGTPase compare
Psyr_4362 -2.6 -4.8 Rare lipoprotein A compare
Psyr_0531 -2.5 -3.8 LmbE-like protein compare
Psyr_RNA28 -2.4 -2.3 tRNA-Val compare
Psyr_1373 -2.4 -4.3 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0454 -2.4 -7.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0951 -2.3 -3.4 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4203 -2.2 -3.4 SsrA-binding protein compare
Psyr_2980 -2.1 -5.4 UDP-glucose pyrophosphorylase compare
Psyr_3419 -2.1 -5.8 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4683 -2.0 -4.9 dethiobiotin synthase compare
Psyr_0444 -2.0 -1.8 Malonate decarboxylase delta subunit compare
Psyr_0571 -2.0 -4.5 tRNA isopentenyltransferase compare
Psyr_1613 -2.0 -4.3 septum site-determining protein MinC compare
Psyr_0383 -2.0 -1.3 Twin-arginine translocation protein TatB compare
Psyr_2594 -1.9 -2.2 unknown conserved protein in bacilli compare
Psyr_0835 -1.9 -6.2 transcriptional regulator, TraR/DksA family compare
Psyr_4519 -1.9 -6.3 General substrate transporter:Major facilitator superfamily compare
Psyr_3179 -1.9 -2.9 DNA translocase FtsK compare
Psyr_3193 -1.9 -3.2 Transcription factor jumonji, jmjC compare
Psyr_4991 -1.8 -2.9 hypothetical protein compare
Psyr_1953 -1.8 -2.9 conserved hypothetical protein compare
Psyr_4015 -1.7 -2.6 conserved domain protein compare
Psyr_0033 -1.7 -3.0 tryptophan synthase, alpha chain compare
Psyr_0475 -1.7 -3.8 Protein of unknown function YGGT compare
Psyr_3208 -1.6 -3.2 NADH dehydrogenase subunit M compare
Psyr_2143 -1.6 -1.8 delta1-piperideine 2-carboxylate reductase compare
Psyr_3287 -1.6 -2.7 DNA topoisomerase I compare
Psyr_5132 -1.6 -3.7 Glucose-inhibited division protein A subfamily compare
Psyr_4684 -1.6 -2.6 biotin synthesis protein BioC compare
Psyr_0255 -1.5 -2.8 glutamate-cysteine ligase compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_1419 -1.5 -3.4 preQ(0) biosynthesis protein QueC compare
Psyr_2227 -1.5 -2.4 conserved hypothetical protein compare
Psyr_2386 -1.5 -3.4 hypothetical protein compare
Psyr_4418 -1.4 -3.1 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4151 -1.4 -1.7 Phosphocarrier HPr protein compare
Psyr_0529 -1.4 -3.7 Glycosyl transferase, group 1 compare
Psyr_2582 -1.3 -7.5 TonB-dependent siderophore receptor compare
Psyr_3698 -1.3 -3.2 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_4115 -1.3 -3.1 phosphoheptose isomerase compare
Psyr_1747 -1.3 -5.0 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_0826 -1.3 -5.8 glucose-6-phosphate isomerase compare
Psyr_4194 -1.2 -3.4 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_2593 -1.2 -2.8 ABC transporter compare
Psyr_4139 -1.2 -3.9 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_2312 -1.2 -1.5 Protein of unknown function DUF24 compare
Psyr_2071 -1.2 -2.2 outer membrane lipoprotein OprI compare
Psyr_5067 -1.2 -4.5 conserved hypothetical protein compare
Psyr_2591 -1.2 -5.4 transport system permease protein compare
Psyr_4512 -1.2 -5.5 putative phage-related protein compare
Psyr_3489 -1.2 -3.1 FlgN compare
Psyr_0014 -1.2 -0.8 lipid A biosynthesis acyltransferase compare
Psyr_5133 -1.1 -3.4 tRNA modification GTPase trmE compare
Psyr_3701 -1.1 -2.0 thioredoxin, putative compare
Psyr_3684 -1.1 -2.3 NLP/P60 compare
Psyr_0917 -1.1 -7.3 ABC-2 compare
Psyr_1371 -1.1 -5.3 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_1024 -1.1 -2.3 Flavodoxin/nitric oxide synthase compare
Psyr_1910 -1.1 -4.2 VacJ-like lipoprotein compare
Psyr_3135 -1.1 -2.3 transcriptional regulator, GntR family compare
Psyr_2592 -1.1 -3.7 transport system permease protein compare
Psyr_2854 -1.1 -4.6 conserved hypothetical protein compare
Psyr_4682 -1.1 -2.0 conserved hypothetical protein compare
Psyr_2137 -1.0 -2.9 molybdopterin molybdochelatase compare
Psyr_2245 -1.0 -2.4 conserved domain protein compare
Psyr_0268 -1.0 -1.8 DSBA oxidoreductase compare
Psyr_5050 -1.0 -2.6 transcriptional regulator, LysR family compare
Psyr_1864 -1.0 -3.6 spermidine synthase compare
Psyr_3013 -1.0 -2.1 magnesium chelatase subunit ChlD compare
Psyr_0838 -1.0 -2.9 Rieske [2Fe-2S] region compare
Psyr_2897 -1.0 -3.8 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0918 -1.0 -7.1 ABC transporter compare
Psyr_3776 -1.0 -3.2 Cytosine deaminase compare
Psyr_2767 -1.0 -1.8 Glycoside hydrolase, family 19 compare
Psyr_4566 -1.0 -5.1 Peptidase M23B compare
Psyr_0574 -1.0 -3.4 protease FtsH subunit HflK compare
Psyr_0575 -1.0 -2.0 protease FtsH subunit HflC compare
Psyr_1576 -1.0 -2.4 Glutamine amidotransferase, class-II compare
Psyr_2080 -0.9 -3.2 aminodeoxychorismate synthase, subunit I compare
Psyr_3581 -0.9 -4.0 ribosomal large subunit pseudouridine synthase B compare
Psyr_3425 -0.9 -1.6 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_2868 -0.9 -3.2 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3202 -0.9 -1.8 NADH dehydrogenase subunit G compare
Psyr_4089 -0.9 -4.3 PAS compare
Psyr_3315 -0.9 -1.7 conserved hypothetical protein compare
Psyr_4808 -0.9 -1.6 conserved hypothetical protein compare
Psyr_3954 -0.9 -2.9 GTP-binding protein LepA compare
Psyr_2067 -0.9 -1.1 ABC transporter compare
Psyr_4158 -0.9 -5.0 conserved hypothetical protein compare
Psyr_3862 -0.9 -3.2 conserved hypothetical protein compare
Psyr_0936 -0.9 -6.1 Glycosyl transferase, group 1 compare
Psyr_3005 -0.9 -1.6 3-oxoadipate enol-lactonase compare
Psyr_0528 -0.9 -1.9 Carbamoyltransferase compare
Psyr_0916 -0.9 -5.9 GDP-mannose 4,6-dehydratase compare
Psyr_0914 -0.9 -6.0 Glycosyl transferase, group 1 compare
Psyr_4451 -0.9 -1.3 UreE urease accessory, N-terminal:UreE urease accessory, C-terminal compare
Psyr_2973 -0.9 -2.1 Glyoxalase I compare
Psyr_1563 -0.9 -3.1 Ribonuclease D compare
Psyr_1663 -0.9 -2.3 phosphoribosylanthranilate isomerase compare
Psyr_1907 -0.8 -1.8 GTP cyclohydrolase I compare
Psyr_3672 -0.8 -2.1 cobalamin-5'-phosphate synthase compare
Psyr_1140 -0.8 -2.3 Disulfide bond formation protein DsbB compare
Psyr_1530 -0.8 -2.1 hypothetical protein compare
Psyr_3637 -0.8 -6.0 Glycosyl transferase, family 4 compare
Psyr_2514 -0.8 -2.7 ABC transporter compare
Psyr_2668 -0.8 -2.7 Helix-turn-helix, Fis-type compare
Psyr_1410 -0.8 -2.3 Holliday junction DNA helicase RuvB compare
Psyr_3947 -0.8 -1.8 Methyltransferase, putative compare
Psyr_4138 -0.8 -2.1 Toluene tolerance compare
Psyr_0579 -0.8 -5.1 RNAse R compare
Psyr_3008 -0.8 -3.3 Undecaprenyl-diphosphatase compare
Psyr_1408 -0.8 -1.1 Holliday junction endonuclease RuvC compare
Psyr_4051 -0.8 -1.9 transcriptional regulator, ArsR family compare
Psyr_2264 -0.8 -1.8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_3675 -0.8 -1.9 adenosylcobinamide kinase compare
Psyr_1247 -0.8 -1.6 conserved hypothetical protein compare
Psyr_0979 -0.8 -2.4 conserved hypothetical protein compare
Psyr_RNA61 -0.8 -1.6 tRNA-Gly compare
Psyr_4843 -0.8 -3.9 NUDIX hydrolase compare
Psyr_2784 -0.8 -2.9 phage-related conserved hypothetical protein compare
Psyr_0498 -0.8 -2.9 Protein of unknown function DUF1445 compare
Psyr_2733 -0.8 -1.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_0025 -0.8 -2.5 shikimate dehydrogenase compare
Psyr_3445 -0.8 -2.2 Flagellar biosynthesis protein, FliO compare
Psyr_3796 -0.8 -2.0 transcriptional regulator, LysR family compare
Psyr_1588 -0.8 -2.3 Putative exonuclease, RdgC compare
Psyr_4598 -0.8 -2.4 lipoprotein, putative compare
Psyr_0176 -0.8 -0.9 conserved hypothetical protein compare
Psyr_3427 -0.8 -2.0 conserved hypothetical protein compare
Psyr_0982 -0.8 -3.2 conserved hypothetical protein compare
Psyr_3812 -0.8 -1.5 CDS compare
Psyr_2538 -0.8 -1.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0132 -0.7 -2.2 conserved hypothetical protein compare
Psyr_4386 -0.7 -1.3 conserved hypothetical protein compare
Psyr_1751 -0.7 -2.5 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0044 -0.7 -1.1 transferase hexapeptide repeat protein compare
Psyr_5065 -0.7 -4.1 ATP-dependent DNA helicase UvrD compare
Psyr_2256 -0.7 -1.6 ABC transporter compare
Psyr_1268 -0.7 -2.9 extracellular solute-binding protein, family 3:SLT compare
Psyr_3904 -0.7 -3.7 Major intrinsic protein compare
Psyr_2092 -0.7 -1.7 Protein of unknown function 1935 compare
Psyr_3674 -0.7 -1.7 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_3644 -0.7 -1.7 prephenate dehydrogenase compare
Psyr_0565 -0.7 -2.7 Protein of unknown function UPF0126 compare
Psyr_4788 -0.7 -1.2 lipoprotein, putative compare
Psyr_3932 -0.7 -1.9 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_1372 -0.7 -2.2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_4833 -0.7 -1.7 histidine ammonia-lyase compare
Psyr_2461 -0.7 -2.2 Uncharacterized conserved protein UCP030820 compare
Psyr_4490 -0.7 -1.3 transcriptional regulator, DeoR family compare
Psyr_4897 -0.7 -1.5 imidazoleglycerol-phosphate dehydratase compare
Psyr_5130 -0.7 -3.7 chromosome segregation ATPase compare
Psyr_2468 -0.7 -1.7 Enoyl-CoA hydratase/isomerase compare
Psyr_4408 -0.7 -3.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_2752 -0.7 -0.9 conserved hypothetical protein compare
Psyr_1932 -0.7 -3.4 CDS compare
Psyr_5072 -0.7 -1.0 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_0976 -0.7 -2.1 Malate:quinone-oxidoreductase compare
Psyr_0041 -0.7 -2.2 Protein of unknown function DUF1161 compare
Psyr_4895 -0.7 -1.4 conserved hypothetical protein compare
Psyr_0920 -0.7 -5.6 Glycosyl transferase, group 1 compare
Psyr_2231 -0.7 -2.4 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_1236 -0.7 -1.4 transcriptional regulator, BadM/Rrf2 family compare
Psyr_3429 -0.7 -1.4 CheW-like protein compare
Psyr_1573 -0.7 -2.1 cyclic nucleotide-binding protein compare
Psyr_2669 -0.7 -2.1 Aminoglycoside phosphotransferase compare
Psyr_1270 -0.7 -1.0 conserved hypothetical protein compare
Psyr_4470 -0.6 -2.5 ABC transporter compare
Psyr_3860 -0.6 -2.6 conserved hypothetical protein compare
Psyr_2195 -0.6 -2.9 Urease accessory protein UreD compare
Psyr_0303 -0.6 -1.3 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_2095 -0.6 -2.6 Conserved TM helix compare
Psyr_0532 -0.6 -2.1 conserved hypothetical protein compare
Psyr_3324 -0.6 -1.9 transcriptional regulator, TetR family compare
Psyr_3842 -0.6 -2.7 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_1714 -0.6 -1.9 exonuclease SbcC compare
Psyr_2060 -0.6 -1.9 Sec-independent protein translocase TatD compare
Psyr_1820 -0.6 -2.0 conserved hypothetical protein compare
Psyr_2990 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0263 -0.6 -2.0 Two-component response regulator AlgB compare
Psyr_0830 -0.6 -2.3 Poly(A) polymerase compare
Psyr_0849 -0.6 -3.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3051 -0.6 -2.1 transcriptional regulator, LysR family compare
Psyr_1017 -0.6 -1.1 type III effector HopJ1 compare
Psyr_0628 -0.6 -3.0 Ethanolamine ammonia-lyase heavy chain compare
Psyr_1670 -0.6 -1.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_1651 -0.6 -3.7 Protein of unknown function DUF175 compare
Psyr_1418 -0.6 -1.7 Radical SAM compare
Psyr_0219 -0.6 -3.9 phosphomannomutase compare
Psyr_2829 -0.6 -1.8 conserved hypothetical protein compare
Psyr_0199 -0.6 -1.8 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_0735 -0.6 -1.9 Peptidase S24, S26A and S26B compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Solanesol across organisms