Experiment set9IT065 for Sinorhizobium meliloti 1021

Compare to:

Myristic acid carbon source

200 most important genes:

  gene name fitness t score description  
SMc01054 -7.0 -4.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc03981 -7.0 -4.8 phosphoglycerate kinase compare
SMc00917 -6.8 -4.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00236 -6.8 -6.6 Indole-3-glycerol phosphate synthase compare
SMc02767 -6.3 -10.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc04045 -6.3 -7.5 dihydroxy-acid dehydratase compare
SMa1635 -6.3 -2.4 hypothetical protein compare
SMc01726 -6.2 -7.3 acetylglutamate kinase compare
SMc01843 -6.2 -11.2 5,10-methylenetetrahydrofolate reductase compare
SMc00235 -6.1 -8.4 anthranilate phosphoribosyltransferase compare
SMc00977 -6.1 -8.3 acyl-CoA dehydrogenase compare
SMc03776 -6.0 -4.2 gamma-glutamyl kinase compare
SMc02766 -6.0 -19.9 tryptophan synthase subunit beta compare
SMc03797 -6.0 -10.9 homoserine O-succinyltransferase compare
SMc00494 -5.9 -2.3 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02725 -5.9 -11.9 anthranilate synthase compare
SMc01028 -5.9 -14.2 phosphopyruvate hydratase compare
SMc02838 -5.7 -4.9 phosphoglyceromutase compare
SMc00918 -5.7 -9.5 ATP phosphoribosyltransferase regulatory subunit compare
SMc02717 -5.7 -14.2 2-isopropylmalate synthase compare
SMc00025 -5.7 -7.7 pyruvate phosphate dikinase compare
SMc02124 -5.6 -13.1 nitrite reductase compare
SMc00293 -5.5 -12.5 homoserine dehydrogenase compare
SMc00768 -5.5 -11.1 isocitrate lyase compare
SMc02162 -5.4 -10.0 long-chain-fatty-acid--CoA ligase conserved
SMc04026 -5.4 -7.3 glutamate synthase compare
SMc02229 -5.2 -10.1 acyl-CoA dehydrogenase compare
SMc02765 -5.2 -11.7 tryptophan synthase subunit alpha compare
SMc02225 -5.2 -5.1 hypothetical protein compare
SMc00640 -5.2 -9.3 phosphoserine aminotransferase compare
SMc04028 -5.1 -18.9 glutamate synthase compare
SMc01494 -5.1 -11.7 phosphoserine phosphatase compare
SMc02899 -5.1 -11.2 prephenate dehydratase compare
SMc00092 -5.1 -13.2 phosphoadenosine phosphosulfate reductase compare
SMc03979 -5.1 -3.5 glyceraldehyde-3-phosphate dehydrogenase compare
SMc04405 -5.1 -13.1 3-isopropylmalate dehydrogenase compare
SMc03112 -5.0 -16.1 B12-dependent methionine synthase compare
SMc02228 -4.9 -8.9 acetyl-CoA acetyltransferase compare
SMc02227 -4.9 -4.8 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc01004 -4.8 -8.7 phosphoribosyl-AMP cyclohydrolase compare
SMc02217 -4.8 -7.3 O-succinylhomoserine sulfhydrylase compare
SMc02123 -4.7 -4.7 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02245 -4.7 -6.0 dihydroorotate dehydrogenase 2 compare
SMc01431 -4.7 -15.1 acetolactate synthase 3 catalytic subunit compare
SMc00090 -4.7 -12.0 sulfate adenylyltransferase compare
SMc00615 -4.7 -10.0 phosphoribosylaminoimidazole synthetase compare
SMc00495 -4.6 -7.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02569 -4.6 -4.3 imidazole glycerol phosphate synthase subunit HisF compare
SMc03823 -4.6 -10.8 isopropylmalate isomerase large subunit compare
SMc04001 -4.6 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02755 -4.5 -3.1 S-adenosyl-L-homocysteine hydrolase compare
SMc01801 -4.5 -3.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc03229 -4.5 -2.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02137 -4.4 -4.3 ornithine carbamoyltransferase compare
SMc01053 -4.4 -9.2 siroheme synthase compare
SMc02562 -4.3 -9.6 phosphoenolpyruvate carboxykinase compare
SMc04088 -4.3 -11.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00131 -4.3 -13.7 transcriptional regulator compare
SMc00614 -4.3 -9.0 phosphoribosylglycinamide formyltransferase compare
SM_b20757 -4.3 -8.2 methylmalonyl-CoA mutase compare
SMc00993 -4.2 -12.2 phosphoribosylamine--glycine ligase compare
SMc00711 -4.2 -5.7 cyclohexadienyl dehydrogenase compare
SMc00769 -4.2 -12.2 hypothetical protein compare
SMc04002 -4.1 -7.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SM_b20346 -4.1 -10.3 efflux protein compare
SM_b20345 -4.0 -15.6 efflux protein compare
SMc03795 -3.9 -2.1 isopropylmalate isomerase small subunit compare
SMc02640 -3.9 -3.8 UDP-glucuronic acid epimerase compare
SMc00488 -3.9 -17.2 phosphoribosylformylglycinamidine synthase II compare
SMc02572 -3.8 -3.9 imidazole glycerol phosphate synthase subunit HisH compare
SMc02478 -3.7 -12.5 hypothetical protein compare
SMc00091 -3.7 -12.3 sulfate adenylyltransferase compare
SMc00177 -3.7 -7.6 hypothetical protein compare
SMc00174 -3.7 -10.4 hypothetical protein compare
SMc00648 -3.6 -5.6 hypothetical protein compare
SMc00493 -3.6 -6.6 phosphoribosylformylglycinamidine synthase I compare
SMc03974 -3.6 -3.6 hypothetical protein compare
SMc00294 -3.6 -10.1 aminotransferase compare
SMc00175 -3.5 -7.4 ABC transporter ATP-binding protein compare
SMc00017 -3.5 -1.8 homoserine kinase compare
SMc02172 -3.5 -12.0 transcriptional regulator compare
SMc00554 -3.5 -9.0 amidophosphoribosyltransferase compare
SMc03777 -3.5 -8.4 gamma-glutamyl phosphate reductase compare
SMc01360 -3.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SM_b20823 -3.5 -10.9 cell surface saccharide synthesis protein compare
SMc00838 -3.4 -7.6 hypothetical protein compare
SMc00641 -3.4 -5.5 D-3-phosphoglycerate dehydrogenase compare
SMc02307 -3.3 -8.5 histidinol dehydrogenase compare
SMc02753 -3.3 -1.2 PTS system transporter subunit IIA compare
SMc01220 -3.3 -4.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02166 -3.2 -11.8 dihydroorotase compare
SMc00176 -3.2 -10.4 hypothetical protein compare
SMc02246 -3.2 -1.2 hypothetical protein compare
SMc04346 -3.1 -4.9 ketol-acid reductoisomerase compare
SMc02570 -3.1 -4.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc04454 -3.1 -6.4 ABC transporter ATP-binding protein compare
SMc00087 -3.0 -12.6 hydrolase compare
SMc01881 -3.0 -2.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01430 -2.9 -5.8 acetolactate synthase 3 regulatory subunit compare
SMc02138 -2.9 -5.3 acetylornithine transaminase compare
SMc02165 -2.8 -8.6 orotate phosphoribosyltransferase compare
SMc02641 -2.8 -1.9 UDP-glucose 6-dehydrogenase compare
SMc01770 -2.7 -2.3 serine hydroxymethyltransferase compare
SMc02909 -2.7 -2.2 transglycosylase transmembrane protein compare
SMc00412 -2.7 -5.6 orotidine 5'-phosphate decarboxylase compare
SMc03168 -2.6 -16.0 multidrug efflux system protein compare
SMc03167 -2.6 -8.3 multidrug efflux system protein compare
SM_b21177 -2.6 -9.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc02270 -2.6 -16.4 capsular polysaccharide biosynthesis\export transmembrane protein compare
SMc02271 -2.6 -7.0 ribitol type dehydrogenase compare
SMc02581 -2.6 -10.0 malate synthase G compare
SMc01842 -2.6 -2.2 methyltransferase transcription regulator protein compare
SMc02308 -2.5 -2.5 hypothetical protein compare
SMc02695 -2.5 -5.5 GTP-dependent nucleic acid-binding protein EngD compare
SMc01124 -2.5 -7.3 PII uridylyl-transferase compare
SM_b20347 -2.5 -5.1 transcriptional regulator compare
SMc03069 -2.5 -1.7 6-phosphogluconolactonase compare
SMc04005 -2.4 -9.2 pyruvate kinase compare
SMc02707 -2.4 -3.8 hypothetical protein compare
SMc00982 -2.4 -6.3 dioxygenase compare
SMa2020 -2.3 -5.9 Transcriptional regulator compare
SMc00689 -2.3 -4.6 lipoprotein compare
SM_b21175 -2.3 -3.5 phosphate uptake ABC transporter permease compare
SMc01207 -2.3 -2.2 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00012 -2.3 -1.9 cytochrome C oxidase assembly protein compare
SMc02269 -2.3 -11.9 capsular polysaccharide biosynthesis/export protein compare
SMc01361 -2.3 -3.0 dihydroorotase compare
SM_b20834 -2.3 -11.7 surface saccharide synthesis protein compare
SMc02713 -2.2 -2.6 RNA polymerase sigma-E factor (sigma-24) protein compare
SM_b21174 -2.2 -4.1 phosphate uptake ABC transporter permease compare
SM_b21253 -2.2 -5.6 hypothetical protein compare
SMc00576 -2.1 -4.4 hypothetical protein compare
SMa0789 -2.0 -2.9 GntR family transcriptional regulator compare
SMc01880 -2.0 -1.4 pantoate--beta-alanine ligase compare
SMc03978 -2.0 -1.4 transketolase compare
SMc01595 -2.0 -3.8 sensor histidine kinase transmembrane protein compare
SMc02272 -2.0 -7.9 acyl-transferase transferase compare
SMc01164 -1.9 -7.9 hypothetical protein compare
SMc02273 -1.9 -16.3 fatty acid synthase transmembrane protein compare
SMc00414 -1.9 -11.4 hypothetical protein compare
SMc01364 -1.9 -1.3 DNA topoisomerase I compare
SMc00876 -1.9 -3.0 ATP-binding MRP protein compare
SMc01114 -1.8 -5.7 phoH-like protein compare
SMc00727 -1.8 -7.9 3-hydroxybutyryl-CoA dehydrogenase compare
SMc02365 -1.8 -7.2 protease precursor protein compare
SMc03879 -1.8 -4.5 Acetyl-CoA acetyltransferase (EC 2.3.1.9) (from data) compare
SMc00010 -1.8 -1.2 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03100 -1.8 -1.5 hypothetical protein compare
SMc02384 -1.8 -6.9 glycosyltransferase transmembrane protein compare
SM_b20752 -1.7 -6.6 3-hydroxyisobutyryl-CoA hydrolase compare
SM_b21176 -1.7 -4.5 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc01187 -1.7 -1.6 rare lipoprotein A compare
SMc02860 -1.7 -1.9 hypothetical protein compare
SMc00555 -1.7 -1.6 colicin V production transmembrane protein compare
SMc02975 -1.7 -8.3 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SMc00295 -1.7 -0.9 hypothetical protein compare
SMc02434 -1.6 -3.6 hypothetical protein compare
SMc02058 -1.6 -3.7 YAJC protein compare
SM_b21252 -1.6 -11.2 glycosyltransferase compare
SM_b21264 -1.6 -10.9 hypothetical protein compare
SMc02047 -1.6 -4.9 glycine cleavage system aminomethyltransferase T compare
SMc01342 -1.6 -3.3 hypothetical protein compare
SMc00361 -1.6 -3.1 hypothetical protein compare
SMc00761 -1.5 -7.0 oxidoreductase compare
SMc01441 -1.5 -4.5 membrane bound protease compare
SMc02144 -1.5 -2.2 phosphate ABC transporter permease compare
SMc00189 -1.5 -3.2 cytochrome C1 protein compare
SMc00622 -1.5 -6.5 ribonuclease D protein compare
SMc03780 -1.5 -3.7 hypothetical protein compare
SMc04052 -1.5 -1.7 transcriptional regulator compare
SMc00450 -1.4 -1.3 protoheme IX farnesyltransferase compare
SMc01578 -1.4 -5.6 aspartate aminotransferase compare
SMc03935 -1.4 -9.5 hypothetical protein compare
SMc02385 -1.4 -2.3 hypothetical protein compare
SMa1765 -1.4 -1.6 hypothetical protein compare
SMc02362 -1.4 -1.3 cytochrome c-type biogenesis protein CcmE compare
SMc00116 -1.4 -4.8 hypothetical protein compare
SMc02833 -1.4 -0.9 penicillin-insensitive murein endopeptidase compare
SM_b20953 -1.4 -1.2 hypothetical protein compare
SMc03763 -1.3 -0.9 cytosine-specific methyltransferase compare
SMc03949 -1.3 -4.2 nitrogen regulatory protein compare
SMc02850 -1.3 -1.5 DNA polymerase I compare
SMa0112 -1.3 -2.4 hypothetical protein compare
SM_b21266 -1.3 -3.3 hypothetical protein compare
SMc03850 -1.3 -0.6 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b21265 -1.3 -7.4 glycosyltransferase compare
SMc00322 -1.3 -5.3 hypothetical protein compare
SMc00405 -1.3 -5.9 hypothetical protein compare
SMc02983 -1.2 -5.4 ornithine, DAP, or arginine decarboxylase compare
SMc01769 -1.2 -8.2 hypothetical protein compare
SM_b21261 -1.2 -9.4 mureinpeptideoligopeptide ABC transporter substrate-binding protein precursor compare
SM_b21256 -1.2 -7.7 nucleotide sugar oxidase compare
SMc02978 -1.2 -3.2 hypothetical protein compare
SM_b20258 -1.2 -2.9 transcriptional regulator compare
SMc04348 -1.2 -1.4 transcriptional regulator compare
SMc00355 -1.2 -2.6 hypothetical protein compare
SMc03111 -1.2 -4.5 mannose 6-phosphate isomerase (EC 5.3.1.8) (from data) compare
SM_b20616 -1.2 -1.6 thiamine biosynthesis oxidoreductase compare
SMc02232 -1.2 -1.3 hypothetical protein compare
SMc02048 -1.2 -4.1 glycine cleavage system protein H compare


Specific Phenotypes

For 23 genes in this experiment

For carbon source Myristic acid in Sinorhizobium meliloti 1021

For carbon source Myristic acid across organisms