Experiment set9IT064 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with dihydrojasmonic acid, methyl ester 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4203 -3.9 -3.8 SsrA-binding protein compare
Psyr_4740 -3.9 -9.6 thiazole-phosphate synthase compare
Psyr_0034 -3.5 -3.4 tryptophan synthase, beta chain compare
Psyr_4091 -3.5 -6.6 8-oxo-dGTPase compare
Psyr_4340 -3.2 -11.0 phosphomethylpyrimidine kinase, putative compare
Psyr_4341 -3.2 -10.0 thiamine-phosphate diphosphorylase compare
Psyr_4683 -3.1 -6.5 dethiobiotin synthase compare
Psyr_0951 -3.0 -4.1 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4687 -3.0 -11.4 biotin synthase compare
Psyr_1544 -2.9 -5.2 SirA-like protein compare
Psyr_0033 -2.8 -3.3 tryptophan synthase, alpha chain compare
Psyr_1121 -2.5 -2.7 6-phosphogluconolactonase compare
Psyr_0454 -2.4 -7.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0255 -2.3 -3.3 glutamate-cysteine ligase compare
Psyr_4686 -2.2 -7.6 8-amino-7-oxononanoate synthase compare
Psyr_1613 -2.1 -5.8 septum site-determining protein MinC compare
Psyr_0383 -2.0 -1.3 Twin-arginine translocation protein TatB compare
Psyr_2980 -2.0 -5.0 UDP-glucose pyrophosphorylase compare
Psyr_4684 -2.0 -3.8 biotin synthesis protein BioC compare
Psyr_0475 -1.9 -4.4 Protein of unknown function YGGT compare
Psyr_0835 -1.8 -5.2 transcriptional regulator, TraR/DksA family compare
Psyr_4519 -1.8 -5.6 General substrate transporter:Major facilitator superfamily compare
Psyr_0571 -1.7 -3.9 tRNA isopentenyltransferase compare
Psyr_5133 -1.7 -4.9 tRNA modification GTPase trmE compare
Psyr_3287 -1.6 -1.7 DNA topoisomerase I compare
Psyr_1663 -1.6 -4.2 phosphoribosylanthranilate isomerase compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_3419 -1.5 -4.6 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_1419 -1.5 -4.1 preQ(0) biosynthesis protein QueC compare
Psyr_1373 -1.4 -2.0 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_2594 -1.4 -1.7 unknown conserved protein in bacilli compare
Psyr_3013 -1.4 -2.0 magnesium chelatase subunit ChlD compare
Psyr_0528 -1.4 -2.8 Carbamoyltransferase compare
Psyr_3202 -1.4 -1.7 NADH dehydrogenase subunit G compare
Psyr_0487 -1.3 -2.8 glutathione synthase compare
Psyr_3425 -1.3 -3.3 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_1418 -1.3 -2.2 Radical SAM compare
Psyr_5132 -1.3 -3.3 Glucose-inhibited division protein A subfamily compare
Psyr_2143 -1.3 -1.9 delta1-piperideine 2-carboxylate reductase compare
Psyr_3947 -1.3 -3.1 Methyltransferase, putative compare
Psyr_3698 -1.3 -3.6 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_3906 -1.2 -2.7 regulatory protein, DeoR compare
Psyr_4408 -1.2 -5.7 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4566 -1.2 -6.6 Peptidase M23B compare
Psyr_3293 -1.2 -1.2 UspA compare
Psyr_2612 -1.2 -2.0 syrP protein, putative compare
Psyr_3208 -1.2 -1.6 NADH dehydrogenase subunit M compare
Psyr_4490 -1.2 -2.1 transcriptional regulator, DeoR family compare
Psyr_2227 -1.1 -1.8 conserved hypothetical protein compare
Psyr_2591 -1.1 -3.9 transport system permease protein compare
Psyr_5067 -1.1 -4.9 conserved hypothetical protein compare
Psyr_4362 -1.1 -1.6 Rare lipoprotein A compare
Psyr_3701 -1.1 -2.0 thioredoxin, putative compare
Psyr_0849 -1.1 -6.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3755 -1.1 -2.0 conserved hypothetical protein compare
Psyr_1378 -1.1 -2.6 RecA protein compare
Psyr_1198 -1.1 -2.5 type III secretion protein HrpF compare
Psyr_2854 -1.1 -4.3 conserved hypothetical protein compare
Psyr_4009 -1.1 -4.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4830 -1.1 -2.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2211 -1.1 -2.2 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_0303 -1.1 -2.4 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_3681 -1.1 -2.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_0574 -1.0 -3.6 protease FtsH subunit HflK compare
Psyr_1227 -1.0 -2.6 Queuosine biosynthesis protein compare
Psyr_1907 -1.0 -2.2 GTP cyclohydrolase I compare
Psyr_4089 -1.0 -4.4 PAS compare
Psyr_4158 -1.0 -5.3 conserved hypothetical protein compare
Psyr_2590 -1.0 -2.2 Periplasmic binding protein compare
Psyr_3199 -1.0 -2.4 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2582 -1.0 -5.6 TonB-dependent siderophore receptor compare
Psyr_0385 -1.0 -3.0 phosphoribosyl-ATP pyrophosphatase compare
Psyr_3739 -1.0 -2.9 conserved hypothetical protein compare
Psyr_2897 -1.0 -4.0 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0917 -1.0 -6.4 ABC-2 compare
Psyr_4262 -1.0 -1.1 lipoprotein, putative compare
Psyr_0312 -1.0 -3.2 hypothetical protein compare
Psyr_2202 -0.9 -1.4 ABC transporter compare
Psyr_1528 -0.9 -2.5 Arc-like DNA binding protein compare
Psyr_1097 -0.9 -1.9 glycine cleavage system H protein compare
Psyr_2180 -0.9 -2.6 transcriptional regulator, LysR family compare
Psyr_0831 -0.9 -1.6 Two-component response regulator CbrB compare
Psyr_3193 -0.9 -1.5 Transcription factor jumonji, jmjC compare
Psyr_3581 -0.9 -3.7 ribosomal large subunit pseudouridine synthase B compare
Psyr_3005 -0.9 -2.2 3-oxoadipate enol-lactonase compare
Psyr_3644 -0.9 -2.9 prephenate dehydrogenase compare
Psyr_3020 -0.9 -1.2 precorrin-4 C11-methyltransferase compare
Psyr_4822 -0.9 -2.0 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_3841 -0.9 -2.2 conserved hypothetical protein compare
Psyr_0282 -0.9 -3.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3904 -0.9 -4.7 Major intrinsic protein compare
Psyr_2543 -0.9 -1.7 conserved hypothetical protein compare
Psyr_3672 -0.9 -2.1 cobalamin-5'-phosphate synthase compare
Psyr_1747 -0.9 -2.6 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1910 -0.9 -3.4 VacJ-like lipoprotein compare
Psyr_3674 -0.9 -1.2 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_2386 -0.9 -1.5 hypothetical protein compare
Psyr_1017 -0.9 -1.8 type III effector HopJ1 compare
Psyr_0393 -0.9 -2.0 Protein of unknown function DUF971 compare
Psyr_0580 -0.9 -2.8 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_4593 -0.9 -2.7 sigma factor domain protein compare
Psyr_4582 -0.9 -1.1 hypothetical protein compare
Psyr_0575 -0.8 -1.9 protease FtsH subunit HflC compare
Psyr_4416 -0.8 -2.7 precorrin-8X methylmutase compare
Psyr_4194 -0.8 -3.5 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3315 -0.8 -1.1 conserved hypothetical protein compare
Psyr_0529 -0.8 -2.2 Glycosyl transferase, group 1 compare
Psyr_3665 -0.8 -2.2 conserved hypothetical protein compare
Psyr_4991 -0.8 -1.5 hypothetical protein compare
Psyr_1431 -0.8 -2.4 hypothetical protein compare
Psyr_3418 -0.8 -3.0 PilT protein, N-terminal compare
Psyr_4115 -0.8 -1.4 phosphoheptose isomerase compare
Psyr_0918 -0.8 -5.9 ABC transporter compare
Psyr_3445 -0.8 -1.8 Flagellar biosynthesis protein, FliO compare
Psyr_2514 -0.8 -2.3 ABC transporter compare
Psyr_4139 -0.8 -2.8 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_1371 -0.8 -3.5 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0826 -0.8 -3.3 glucose-6-phosphate isomerase compare
Psyr_2853 -0.8 -4.2 CDS compare
Psyr_2973 -0.8 -1.5 Glyoxalase I compare
Psyr_2294 -0.8 -1.5 conserved hypothetical protein compare
Psyr_0215 -0.8 -4.4 Exodeoxyribonuclease III xth compare
Psyr_3282 -0.8 -3.4 transcriptional regulator, TetR family compare
Psyr_2829 -0.8 -1.4 conserved hypothetical protein compare
Psyr_5072 -0.8 -1.0 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_2091 -0.8 -3.2 esterase/lipase/thioesterase family protein compare
Psyr_0524 -0.7 -1.7 Lipopolysaccharide kinase compare
Psyr_0281 -0.7 -1.4 ABC transporter compare
Psyr_1094 -0.7 -1.7 cold-shock DNA-binding protein family compare
Psyr_0565 -0.7 -2.5 Protein of unknown function UPF0126 compare
Psyr_1949 -0.7 -2.2 ABC-3 compare
Psyr_2259 -0.7 -1.6 Beta-lactamase-like protein compare
Psyr_1268 -0.7 -2.7 extracellular solute-binding protein, family 3:SLT compare
Psyr_0838 -0.7 -1.7 Rieske [2Fe-2S] region compare
Psyr_0449 -0.7 -2.9 Malonate transporter MadL subunit compare
Psyr_0936 -0.7 -5.1 Glycosyl transferase, group 1 compare
Psyr_4424 -0.7 -3.5 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_2593 -0.7 -1.6 ABC transporter compare
Psyr_3358 -0.7 -1.6 transmembrane pair compare
Psyr_1892 -0.7 -2.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_3677 -0.7 -1.4 Aminotransferase, class I and II compare
Psyr_1417 -0.7 -2.7 TPR repeat protein compare
Psyr_4470 -0.7 -2.8 ABC transporter compare
Psyr_3727 -0.7 -3.2 conserved hypothetical protein compare
Psyr_3427 -0.7 -1.7 conserved hypothetical protein compare
Psyr_3926 -0.7 -1.8 transcriptional regulator, PadR family compare
Psyr_0916 -0.7 -4.8 GDP-mannose 4,6-dehydratase compare
Psyr_0169 -0.7 -1.2 Hsp33 protein compare
Psyr_2869 -0.7 -2.3 xenobiotic compound monooxygenase, DszA family compare
Psyr_2231 -0.7 -2.3 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_2552 -0.7 -1.3 cyclase/dehydrase compare
Psyr_2095 -0.7 -2.5 Conserved TM helix compare
Psyr_1247 -0.7 -1.4 conserved hypothetical protein compare
Psyr_2141 -0.7 -1.5 hypothetical protein compare
Psyr_2062 -0.7 -1.7 DoxD-like family protein compare
Psyr_4512 -0.7 -3.4 putative phage-related protein compare
Psyr_4580 -0.7 -1.5 anthranilate phosphoribosyltransferase compare
Psyr_3459 -0.7 -0.9 Helix-turn-helix, Fis-type compare
Psyr_2668 -0.7 -2.0 Helix-turn-helix, Fis-type compare
Psyr_4788 -0.7 -1.4 lipoprotein, putative compare
Psyr_2360 -0.7 -0.8 CBS compare
Psyr_2820 -0.7 -1.0 RecT protein compare
Psyr_3938 -0.7 -2.1 Amidase compare
Psyr_3043 -0.7 -1.3 Paraquat-inducible protein A compare
Psyr_1667 -0.7 -2.9 Colicin V production protein compare
Psyr_0531 -0.7 -1.4 LmbE-like protein compare
Psyr_4138 -0.7 -2.0 Toluene tolerance compare
Psyr_1455 -0.7 -1.4 conserved hypothetical protein compare
Psyr_0845 -0.7 -1.4 conserved hypothetical protein compare
Psyr_2572 -0.7 -1.2 ribose-5-phosphate isomerase compare
Psyr_4141 -0.7 -2.3 ABC transporter compare
Psyr_1050 -0.6 -1.9 conserved hypothetical protein compare
Psyr_0920 -0.6 -5.5 Glycosyl transferase, group 1 compare
Psyr_2344 -0.6 -1.4 CDS compare
Psyr_2777 -0.6 -2.4 NLP/P60 compare
Psyr_2065 -0.6 -1.9 transcription elongation factor GreB compare
Psyr_4620 -0.6 -2.4 conserved hypothetical protein compare
Psyr_1317 -0.6 -1.3 conserved hypothetical protein compare
Psyr_3103 -0.6 -2.3 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_1941 -0.6 -1.2 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_2743 -0.6 -1.7 Lysine exporter protein (LYSE/YGGA) compare
Psyr_0070 -0.6 -0.9 hypothetical protein compare
Psyr_1700 -0.6 -2.1 Glycosyl hydrolase, BNR repeat protein compare
Psyr_4627 -0.6 -1.4 dimethyladenosine transferase compare
Psyr_2256 -0.6 -1.9 ABC transporter compare
Psyr_3289 -0.6 -0.9 3-ketoacyl-CoA thiolase compare
Psyr_3820 -0.6 -1.7 conserved domain protein compare
Psyr_2905 -0.6 -2.9 ABC transporter compare
Psyr_1624 -0.6 -1.5 transcriptional regulator, MarR family compare
Psyr_1614 -0.6 -0.8 lipid A biosynthesis acyltransferase compare
Psyr_2392 -0.6 -2.7 conserved hypothetical protein compare
Psyr_0378 -0.6 -3.8 Glycosyl transferase, family 2 compare
Psyr_1702 -0.6 -2.9 regulatory protein, LuxR compare
Psyr_4395 -0.6 -1.9 type II secretion system protein compare
Psyr_3115 -0.6 -1.8 Glycerate kinase compare
Psyr_RNA28 -0.6 -1.1 tRNA-Val compare
Psyr_3695 -0.6 -4.0 RelA/SpoT protein compare
Psyr_1308 -0.6 -2.0 Protein-glutamate methylesterase compare
Psyr_4843 -0.6 -3.0 NUDIX hydrolase compare
Psyr_2990 -0.6 -1.5 conserved hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress dihydrojasmonic acid, methyl ester across organisms