Experiment set9IT064 for Ralstonia sp. UNC404CL21Col

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS02155 -6.0 -9.2 anthranilate phosphoribosyltransferase compare
ABZR87_RS14540 -5.5 -7.5 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS13790 -5.5 -8.4 chorismate synthase compare
ABZR87_RS13250 -5.4 -5.2 phosphoserine phosphatase SerB compare
ABZR87_RS02570 -5.3 -25.6 glutamate synthase-related protein compare
ABZR87_RS00200 -5.2 -6.2 phosphoadenylyl-sulfate reductase compare
ABZR87_RS09465 -5.1 -7.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS14535 -5.1 -8.4 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS02565 -5.1 -6.9 glutamate synthase subunit beta compare
ABZR87_RS20875 -5.0 -10.1 LysR family transcriptional regulator compare
ABZR87_RS16170 -5.0 -5.9 argininosuccinate lyase compare
ABZR87_RS22970 -4.9 -15.5 cystathionine gamma-synthase family protein compare
ABZR87_RS14530 -4.9 -10.9 3-isopropylmalate dehydrogenase compare
ABZR87_RS05200 -4.8 -21.3 homoserine O-acetyltransferase compare
ABZR87_RS14490 -4.8 -11.5 tryptophan synthase subunit alpha compare
ABZR87_RS02590 -4.7 -13.4 3-dehydroquinate synthase compare
ABZR87_RS02595 -4.7 -13.8 shikimate kinase compare
ABZR87_RS07360 -4.7 -18.0 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS09445 -4.7 -15.4 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS02640 -4.6 -17.7 diaminopimelate decarboxylase compare
ABZR87_RS02160 -4.5 -8.1 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS00285 -4.5 -3.1 acetylornithine transaminase compare
ABZR87_RS16140 -4.5 -19.5 phosphoenolpyruvate carboxylase compare
ABZR87_RS22920 -4.5 -4.3 phosphogluconate dehydratase compare
ABZR87_RS06770 -4.4 -9.4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS20880 -4.4 -12.3 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS14500 -4.4 -16.1 tryptophan synthase subunit beta compare
ABZR87_RS07380 -4.4 -15.1 FAD/FMN-binding oxidoreductase compare
ABZR87_RS00210 -4.4 -11.6 nitrite/sulfite reductase compare
ABZR87_RS05100 -4.3 -7.7 RNA polymerase-binding protein DksA compare
ABZR87_RS09450 -4.3 -7.0 prephenate dehydratase compare
ABZR87_RS14505 -4.3 -4.3 phosphoribosylanthranilate isomerase compare
ABZR87_RS04865 -4.2 -5.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS01110 -4.2 -12.2 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS00835 -4.1 -8.3 argininosuccinate synthase compare
ABZR87_RS05170 -4.1 -4.9 acetylglutamate kinase compare
ABZR87_RS02140 -4.0 -20.2 anthranilate synthase component I compare
ABZR87_RS00190 -3.9 -14.5 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS14955 -3.9 -9.0 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS08630 -3.9 -11.2 dihydroorotase compare
ABZR87_RS11440 -3.8 -8.8 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS09935 -3.8 -5.7 amino acid aminotransferase compare
ABZR87_RS14950 -3.8 -3.5 acetolactate synthase small subunit compare
ABZR87_RS23225 -3.8 -11.7 sugar ABC transporter permease compare
ABZR87_RS10240 -3.7 -2.5 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS00185 -3.6 -5.5 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS08625 -3.6 -2.5 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS22910 -3.6 -3.4 6-phosphogluconolactonase compare
ABZR87_RS00205 -3.5 -5.6 DUF934 domain-containing protein compare
ABZR87_RS01810 -3.4 -4.7 glutamate 5-kinase compare
ABZR87_RS00195 -3.4 -5.2 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS00220 -3.4 -13.1 CysB family HTH-type transcriptional regulator compare
ABZR87_RS13300 -3.4 -12.0 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS22915 -3.3 -14.5 glucose-6-phosphate dehydrogenase compare
ABZR87_RS02145 -3.3 -3.0 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS07320 -3.2 -10.6 gluconokinase compare
ABZR87_RS23220 -3.2 -11.6 xylose ABC transporter ATP-binding protein compare
ABZR87_RS13285 -3.2 -13.5 polyhydroxyalkanoate synthesis repressor PhaR compare
ABZR87_RS05590 -3.0 -3.6 orotate phosphoribosyltransferase compare
ABZR87_RS05305 -2.9 -11.8 TetR family transcriptional regulator compare
ABZR87_RS12790 -2.8 -5.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS00435 -2.8 -10.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS19095 -2.8 -8.4 gluconate:H+ symporter compare
ABZR87_RS12785 -2.8 -3.7 endopeptidase La compare
ABZR87_RS16125 -2.7 -7.6 heme biosynthesis protein HemY compare
ABZR87_RS01615 -2.7 -4.4 RNB domain-containing ribonuclease compare
ABZR87_RS14115 -2.7 -2.8 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS23215 -2.6 -7.7 D-xylose ABC transporter substrate-binding protein compare
ABZR87_RS01645 -2.5 -5.1 type II 3-dehydroquinate dehydratase compare
ABZR87_RS13290 -2.5 -6.8 3-ketoacyl-ACP reductase compare
ABZR87_RS10120 -2.5 -3.9 YceD family protein compare
ABZR87_RS13475 -2.4 -8.8 PAS domain S-box protein compare
ABZR87_RS15440 -2.4 -4.7 ribonuclease G compare
ABZR87_RS00355 -2.2 -11.4 quinolinate synthase NadA compare
ABZR87_RS00350 -2.2 -8.0 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS16080 -2.2 -2.4 P-II family nitrogen regulator compare
ABZR87_RS01605 -2.1 -9.3 shikimate dehydrogenase compare
ABZR87_RS10565 -2.1 -6.1 cupin domain-containing protein compare
ABZR87_RS09625 -2.0 -11.5 CobD/CbiB family protein compare
ABZR87_RS05350 -2.0 -7.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS17145 -2.0 -13.2 AMP nucleosidase compare
ABZR87_RS01675 -1.9 -2.8 carbohydrate kinase family protein compare
ABZR87_RS09460 -1.9 -7.1 prephenate dehydrogenase compare
ABZR87_RS11760 -1.9 -1.3 membrane protein compare
ABZR87_RS12795 -1.9 -6.0 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS10820 -1.8 -6.4 LysR substrate-binding domain-containing protein compare
ABZR87_RS02480 -1.8 -3.6 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS07665 -1.8 -10.4 aminopeptidase P N-terminal domain-containing protein compare
ABZR87_RS09710 -1.8 -3.9 tRNA-Arg compare
ABZR87_RS09515 -1.8 -1.6 cysteine synthase CysM compare
ABZR87_RS04125 -1.8 -7.2 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS07700 -1.7 -2.6 peptidylprolyl isomerase compare
ABZR87_RS02575 -1.7 -6.6 transposase compare
ABZR87_RS01035 -1.6 -4.5 histidine utilization repressor compare
ABZR87_RS09635 -1.6 -2.3 ribosome small subunit-dependent GTPase A compare
ABZR87_RS00215 -1.6 -4.2 sulfite exporter TauE/SafE family protein compare
ABZR87_RS00875 -1.6 -5.4 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS11815 -1.6 -8.1 [protein-PII] uridylyltransferase compare
ABZR87_RS22690 -1.6 -2.0 XRE family transcriptional regulator compare
ABZR87_RS21795 -1.6 -7.0 NUDIX domain-containing protein compare
ABZR87_RS07635 -1.6 -3.6 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS16270 -1.5 -2.4 cold-shock protein compare
ABZR87_RS04975 -1.5 -2.0 peptide deformylase compare
ABZR87_RS10610 -1.5 -1.9 inositol monophosphatase family protein compare
ABZR87_RS16185 -1.5 -2.8 dCTP deaminase compare
ABZR87_RS14495 -1.5 -3.2 site-specific DNA-methyltransferase compare
ABZR87_RS08700 -1.4 -5.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS10785 -1.4 -6.2 exodeoxyribonuclease V subunit beta compare
ABZR87_RS06645 -1.4 -1.8 TlpA disulfide reductase family protein compare
ABZR87_RS23210 -1.4 -5.8 carbohydrate porin compare
ABZR87_RS10780 -1.4 -5.3 PD-(D/E)XK nuclease family protein compare
ABZR87_RS06400 -1.3 -6.7 response regulator transcription factor compare
ABZR87_RS16960 -1.3 -4.4 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS07035 -1.3 -7.1 RNase adapter RapZ compare
ABZR87_RS16180 -1.3 -4.9 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS02445 -1.3 -4.2 Sec-independent protein translocase protein TatB compare
ABZR87_RS05060 -1.2 -3.7 DUF484 family protein compare
ABZR87_RS20450 -1.2 -2.0 HAD family phosphatase compare
ABZR87_RS11925 -1.2 -8.5 phosphoenolpyruvate synthase compare
ABZR87_RS03195 -1.2 -8.7 cation diffusion facilitator family transporter compare
ABZR87_RS10930 -1.2 -2.3 outer membrane protein assembly factor BamB compare
ABZR87_RS11245 -1.2 -5.5 translational GTPase TypA compare
ABZR87_RS17310 -1.2 -5.8 PadR family transcriptional regulator compare
ABZR87_RS02150 -1.2 -1.1 lysozyme inhibitor LprI family protein compare
ABZR87_RS11065 -1.2 -5.7 nitrogen regulation protein NR(II) compare
ABZR87_RS01980 -1.2 -2.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS04995 -1.2 -2.4 DNA topoisomerase III compare
ABZR87_RS08645 -1.2 -1.0 dTDP-glucose 4,6-dehydratase compare
ABZR87_RS06715 -1.2 -3.5 PTS sugar transporter subunit IIA compare
ABZR87_RS11940 -1.2 -3.2 SsrA-binding protein SmpB compare
ABZR87_RS16660 -1.2 -6.1 helix-turn-helix domain-containing protein compare
ABZR87_RS16250 -1.2 -3.5 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS10170 -1.1 -3.4 RseA family anti-sigma factor compare
ABZR87_RS08660 -1.1 -5.2 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS11170 -1.1 -0.9 FixH family protein compare
ABZR87_RS16845 -1.1 -1.3 hypothetical protein compare
ABZR87_RS04785 -1.1 -5.4 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS05085 -1.1 -8.1 lactonase family protein compare
ABZR87_RS10620 -1.1 -2.0 serine O-acetyltransferase compare
ABZR87_RS06845 -1.1 -7.0 heme o synthase compare
ABZR87_RS05205 -1.1 -4.6 methionine biosynthesis protein MetW compare
ABZR87_RS06385 -1.0 -6.4 CHASE3 domain-containing protein compare
ABZR87_RS02440 -1.0 -6.1 twin-arginine translocase subunit TatC compare
ABZR87_RS07705 -1.0 -3.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS21285 -1.0 -1.5 TetR/AcrR family transcriptional regulator compare
ABZR87_RS09085 -1.0 -6.1 DUF883 family protein compare
ABZR87_RS18165 -1.0 -2.1 hypothetical protein compare
ABZR87_RS11390 -1.0 -6.8 PhoH family protein compare
ABZR87_RS17595 -1.0 -2.0 hypothetical protein compare
ABZR87_RS15705 -1.0 -2.8 UvrD-helicase domain-containing protein compare
ABZR87_RS02680 -0.9 -7.0 c-type cytochrome compare
ABZR87_RS23095 -0.9 -1.4 MarR family transcriptional regulator compare
ABZR87_RS09820 -0.9 -3.2 RidA family protein compare
ABZR87_RS07625 -0.9 -2.1 Holliday junction branch migration protein RuvA compare
ABZR87_RS00830 -0.9 -2.1 pyrimidine/purine nucleoside phosphorylase compare
ABZR87_RS08695 -0.9 -5.8 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS09080 -0.9 -2.8 phage holin family protein compare
ABZR87_RS17650 -0.9 -4.7 TetR/AcrR family transcriptional regulator compare
ABZR87_RS20690 -0.9 -1.5 recombinase-like helix-turn-helix domain-containing protein compare
ABZR87_RS08980 -0.9 -2.1 cell envelope integrity protein TolA compare
ABZR87_RS02380 -0.8 -6.6 cytochrome bc complex cytochrome b subunit compare
ABZR87_RS20665 -0.8 -3.4 IclR family transcriptional regulator compare
ABZR87_RS02375 -0.8 -5.6 cytochrome c1 compare
ABZR87_RS16735 -0.8 -7.0 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
ABZR87_RS01685 -0.8 -3.2 histone H1-like DNA-binding protein compare
ABZR87_RS00345 -0.8 -6.3 L-aspartate oxidase compare
ABZR87_RS08655 -0.8 -3.0 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS20300 -0.8 -2.8 hypothetical protein compare
ABZR87_RS13445 -0.8 -2.4 phasin family protein compare
ABZR87_RS12965 -0.8 -1.8 tail protein X compare
ABZR87_RS08970 -0.8 -3.8 protein TolQ compare
ABZR87_RS08640 -0.8 -3.2 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABZR87_RS14330 -0.8 -0.8 hypothetical protein compare
ABZR87_RS09075 -0.8 -3.0 DUF3318 domain-containing protein compare
ABZR87_RS15505 -0.8 -1.0 DNA polymerase III subunit alpha compare
ABZR87_RS07675 -0.8 -4.3 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR87_RS02385 -0.8 -3.2 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS04105 -0.8 -2.6 ATP synthase subunit I compare
ABZR87_RS09700 -0.8 -3.0 DEAD/DEAH box helicase compare
ABZR87_RS12970 -0.8 -2.1 putative holin compare
ABZR87_RS05470 -0.7 -1.4 amino acid ABC transporter ATP-binding protein compare
ABZR87_RS16620 -0.7 -1.9 hypothetical protein compare
ABZR87_RS06495 -0.7 -1.6 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS14235 -0.7 -4.3 formyltetrahydrofolate deformylase compare
ABZR87_RS06745 -0.7 -3.2 S41 family peptidase compare
ABZR87_RS23230 -0.7 -4.2 NAD(P)-dependent oxidoreductase compare
ABZR87_RS08985 -0.7 -4.9 Tol-Pal system beta propeller repeat protein TolB compare
ABZR87_RS11770 -0.7 -3.8 succinyldiaminopimelate transaminase compare
ABZR87_RS20930 -0.7 -2.1 DUF2520 domain-containing protein compare
ABZR87_RS10395 -0.7 -3.3 single-stranded-DNA-specific exonuclease RecJ compare
ABZR87_RS17440 -0.7 -1.2 (2Fe-2S)-binding protein compare
ABZR87_RS12800 -0.7 -3.6 trigger factor compare
ABZR87_RS08990 -0.7 -3.2 peptidoglycan-associated lipoprotein Pal compare
ABZR87_RS02485 -0.7 -0.5 MarC family protein compare
ABZR87_RS16130 -0.6 -1.7 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
ABZR87_RS03625 -0.6 -1.5 hypothetical protein compare
ABZR87_RS13010 -0.6 -1.1 GPW/gp25 family protein compare
ABZR87_RS11195 -0.6 -4.3 pseudouridine synthase compare
ABZR87_RS11265 -0.6 -1.7 amino acid ABC transporter ATP-binding protein compare
ABZR87_RS10865 -0.6 -3.2 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Glucose in Ralstonia sp. UNC404CL21Col

For carbon source D-Glucose across organisms