Experiment set9IT061 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Pyruvate (fermenting) with Na2S as sulfur source with Casamino acids 0.2%

200 most detrimental genes:

  gene name fitness t score description  
DVU2867 +1.9 3.1 holin (TIGR) compare
DVU0043 fliQ +1.7 15.1 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0311 +1.5 11.8 flagellar assembly protein FliH, putative (TIGR) compare
DVU2045 +1.4 7.3 hypothetical protein (TIGR) compare
DVU2894 flrA +1.4 9.8 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0044 fliP +1.4 8.8 flagellar biosynthetic protein fliP (TIGR) compare
DVU0315 flgC +1.4 11.4 flagellar basal-body rod protein FlgC (TIGR) compare
DVU0310 fliI +1.3 9.2 flagellum-specific ATP synthase FliI (TIGR) compare
DVU0512 flgF +1.3 8.0 flagellar basal-body rod protein, putative (TIGR) compare
DVU0045 +1.3 5.1 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0046 fliN +1.3 9.4 flagellar motor switch protein FliN (TIGR) compare
DVU0313 fliF +1.3 8.4 flagellar M-ring protein FliF (TIGR) compare
DVU3232 flhA +1.3 9.5 flagellar biosynthetic protein FlhA (TIGR) compare
DVU0314 fliE +1.3 6.7 flagellar basal body component FliE (TIGR) compare
DVU3233 flhB +1.3 9.1 flagellar biosynthetic protein FlhB (TIGR) compare
DVU3234 +1.2 4.3 flagellar biosynthetic protein FliR (TIGR) compare
DVU0312 fliG +1.2 6.0 flagellar motor switch protein FliG (TIGR) compare
DVU_tRNA-Ala-5 tRNA-Ala +1.2 1.0 tRNA with anticodon CGC for Ala (VIMSS-AUTO) compare
DVU0318 +1.2 3.5 TPR domain protein (TIGR) compare
DVU0516 flgI +1.2 8.2 flagellar P-ring protein FlgI (TIGR) compare
DVU0519 +1.2 10.3 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU1075 rnpA +1.2 0.7 ribonuclease P protein component (TIGR) compare
DVU0307 +1.1 7.1 flagella basal body rod domain protein (TIGR) compare
DVU1251 +1.1 1.5 hypothetical protein (TIGR) compare
DVU0513 flgG +1.1 8.8 flagellar basal-body rod protein FlgG (TIGR) compare
DVU1363 rfbD +1.1 6.4 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU3229 fliA +1.1 5.9 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU0698 rfbC +1.1 8.9 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU0910 fliM +1.1 7.0 flagellar motor switch protein FliM (TIGR) compare
DVU0410 +1.1 6.0 hypothetical protein (TIGR) compare
DVU0793 +1.1 2.3 hypothetical protein (TIGR) compare
DVU0316 flgB +1.1 3.5 flagellar basal-body rod protein FlgB (TIGR) compare
DVU2669 +1.1 3.0 conserved domain protein (TIGR) compare
DVU2896 +1.1 8.3 TPR domain protein (TIGR) compare
DVU0514 +1.1 6.3 FlgA family protein (TIGR) compare
DVU0047 +1.1 4.1 flagellar protein FliL (TIGR) compare
DVU0515 flgH +1.0 5.1 flagellar L-ring protein FlgH (TIGR) compare
DVU3227 +1.0 3.7 flagellar basal body-associated protein, putative (TIGR) compare
DVU1465 +1.0 7.2 CgeB family protein (TIGR) compare
DVU0518 +1.0 4.6 hypothetical protein (TIGR) compare
DVU0863 +1.0 7.9 flagellar hook-associated protein 2, putative (TIGR) compare
DVU1063 flrC +1.0 5.9 transcriptional regulatory protein (TIGR) compare
DVU0912 +0.9 3.8 conserved domain protein (TIGR) compare
DVU1443 flgE +0.9 5.3 flagellar hook protein FlgE (TIGR) compare
DVU2609 +0.9 4.8 chemotaxis MotB protein, putative (TIGR) compare
DVU2510 +0.9 0.6 penicillin-binding protein (TIGR) compare
DVU0858 +0.9 7.6 lipoprotein, putative (TIGR) compare
DVU2903 pcnB2 +0.9 5.6 HD domain protein (TIGR) compare
DVU0522 yviF +0.9 5.1 conserved hypothetical protein (TIGR) compare
DVU3387 +0.9 5.4 hypothetical protein (TIGR) compare
DVU2608 motA-3 +0.9 5.7 chemotaxis protein MotA (TIGR) compare
DORF12455 +0.9 1.3 SEED: helix-turn-helix protein, CopG family compare
DVU1445 +0.9 7.1 flagellar hook-length control domain protein (TIGR) compare
DVU1444 flgD +0.9 5.5 basal-body rod modification protein FlgD (TIGR) compare
DVU0520 +0.9 5.9 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU1862 +0.9 4.0 GGDEF domain protein (TIGR) compare
DVU0295 +0.9 7.1 amine oxidase, flavin-containing (TIGR) compare
DVU0135 +0.8 5.0 conserved hypothetical protein (TIGR) compare
DVU0862 +0.8 4.9 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU0409 +0.8 1.9 hypothetical protein (TIGR) compare
DVU0913 +0.8 2.6 conserved hypothetical protein (TIGR) compare
DVU2578 +0.8 4.7 response regulator (TIGR) compare
DVU2444 flaB3 +0.8 3.2 flagellin (TIGR) compare
DVU3299 +0.8 2.8 membrane protein, putative (TIGR) compare
DVU3287 +0.8 5.6 glycosyl transferase, group 2 family protein (TIGR) compare
DVU1632 +0.7 3.5 PTS system, IIA component (TIGR) compare
DVU2577 +0.7 4.7 DNA-binding response regulator, LuxR family (TIGR) compare
DVU1436 +0.7 0.7 hypothetical protein (TIGR) compare
DVU2112 +0.7 2.5 hypothetical protein (TIGR) compare
DVU2847 +0.7 3.0 hypothetical protein (TIGR) compare
DVU1446 +0.7 4.7 heptosyltransferase family protein (TIGR) compare
DVU0842 +0.7 2.7 hypothetical protein (TIGR) compare
DORF18707 +0.7 0.6 no description compare
DVU2956 flrA +0.7 1.2 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0136 +0.7 2.3 hypothetical protein (TIGR) compare
DVU3393 +0.7 1.1 hypothetical protein (TIGR) compare
DVU1038 hisA +0.7 1.4 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (TIGR) compare
DVU0507 +0.7 1.3 conserved hypothetical protein (TIGR) compare
DVU1449 +0.7 3.8 anti-anti-sigma factor, putative (TIGR) compare
DVU2712 +0.7 1.7 hypothetical protein (TIGR) compare
DVU2566 lysA-2 +0.7 1.6 diaminopimelate decarboxylase (TIGR) compare
DORF8192 +0.6 1.7 SEED: FIG00606834: hypothetical protein compare
DVU3329 +0.6 1.3 hypothetical protein (TIGR) compare
DVU1828 gidA +0.6 2.2 glucose inhibited division protein A (TIGR) compare
DVU0411 +0.6 4.5 heptosyltransferase family protein (TIGR) compare
DVU2855 +0.6 1.6 tail/DNA circulation protein, putative (TIGR) compare
DVU1447 +0.6 3.4 CgeB family protein (TIGR) compare
DVU2863 +0.6 0.7 hypothetical protein (TIGR) compare
DVU1464 +0.6 4.5 heptosyltransferase family protein (TIGR) compare
DVU1735 +0.6 2.2 hypothetical protein (TIGR) compare
DVU2211 +0.6 4.2 hypothetical protein (TIGR) compare
DVU1726 +0.6 0.9 hypothetical protein (TIGR) compare
DVU1863 +0.6 2.3 flagellar synthesis regulator FleN, putative (TIGR) compare
DORF2315 +0.6 0.9 no description compare
DVU1609 dapB +0.6 1.9 dihydrodipicolinate reductase (TIGR) compare
DVU2012 +0.6 0.6 hypothetical protein (TIGR) compare
DVU1682 +0.5 1.8 GAF domain protein (TIGR) compare
DVU1796 +0.5 0.8 hypothetical protein (TIGR) compare
DVU0987 +0.5 0.9 heavy metal-binding domain protein (TIGR) compare
DVU1407 +0.5 2.3 radical SAM domain protein (TIGR) compare
DVU1589 +0.5 2.9 hypothetical protein (TIGR) compare
DVU2606 +0.5 0.9 hypothetical protein (TIGR) compare
DVU1944 oorD +0.5 0.8 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU2400 +0.5 2.1 hydrogenase, putative (TIGR) compare
DVU2893 flgG +0.5 1.4 flagellar basal-body rod protein, putative (TIGR) compare
DVU2865 +0.5 0.5 lipoprotein, putative (TIGR) compare
DVU1129 +0.5 1.7 conserved hypothetical protein (TIGR) compare
DVU1237 glnP +0.5 1.0 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU0097 potB +0.5 1.5 polyamine ABC transporter, permease protein (TIGR) compare
DVU3289 +0.5 1.6 hypothetical protein (TIGR) compare
DVU0486 +0.5 1.3 hypothetical protein (TIGR) compare
DVU0764 hup-2 +0.5 1.6 DNA-binding protein HU (TIGR) compare
DVU1931 +0.5 1.3 iron-sulfur cluster-binding protein (TIGR) compare
DVU2362 thiE-2 +0.5 0.9 thiamine-phosphate pyrophosphorylase (TIGR) compare
DORF43224 +0.5 1.7 no description compare
DVU2401 +0.5 3.1 hydrogenase, iron-sulfur cluster-binding subunit, putative (TIGR) compare
DVU2323 +0.5 1.6 hypothetical protein (TIGR) compare
DVU2404 hdrC +0.5 2.2 heterodisulfide reductase, C subunit (TIGR) compare
DVU1338 +0.5 1.6 conserved hypothetical protein (TIGR) compare
DORF10286 +0.5 2.5 no description compare
DVU2750 cbiD +0.5 2.5 cobalamin biosynthesis protein CbiD (TIGR) compare
DVU1838 trxB-2 +0.5 1.1 thioredoxin reductase (TIGR) compare
DVU0880 +0.4 1.8 hypothetical protein (TIGR) compare
DVU1875 +0.4 0.9 dafA protein (TIGR) compare
DVU1777 cynT +0.4 0.5 carbonic anhydrase (TIGR) compare
DVU3225 +0.4 1.6 hypothetical protein (TIGR) compare
DVU1135 +0.4 1.1 conserved domain protein (TIGR) compare
DVU2377 +0.4 1.2 hypothetical protein (TIGR) compare
DVU0682 +0.4 1.5 DNA-binding protein, putative (TIGR) compare
DVU2328 hypA +0.4 0.8 hydrogenase nickel insertion protein HypA, putative (TIGR) compare
DORF9585 +0.4 0.5 no description compare
DVU1692 +0.4 1.6 hypothetical protein (TIGR) compare
DVU0951 moeA-2 +0.4 1.5 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU0898 +0.4 2.2 conserved hypothetical protein (TIGR) compare
DVU1557 +0.4 0.9 hypothetical protein (TIGR) compare
DVU1971 +0.4 1.3 conserved domain protein (TIGR) compare
DVU0048 +0.4 2.5 chemotaxis protein MotB (TIGR) compare
DVU2591 +0.4 1.2 tail fiber assembly protein, putative (TIGR) compare
DVU0859 +0.4 1.9 hypothetical protein (TIGR) compare
DVU0829 ptsI +0.4 2.1 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DORF13021 +0.4 0.7 no description compare
DVU1441 flaB1 +0.4 2.0 flagellin (TIGR) compare
DVU2441 hspC +0.4 0.6 heat shock protein, Hsp20 family (TIGR) compare
DVU2829 +0.4 1.3 hypothetical protein (TIGR) compare
DVU1536 mltC +0.4 1.6 transglycosylase, SLT family (TIGR) compare
DVU2402 hdrA +0.4 2.7 heterodisulfide reductase, A subunit (TIGR) compare
DVU3032 +0.4 2.1 conserved hypothetical protein (TIGR) compare
DVU0902 +0.4 1.3 TPR domain protein (TIGR) compare
DVU0897 +0.4 1.8 RNA modification enzyme, MiaB-family (TIGR) compare
DVU3318 +0.4 1.5 hypothetical protein (TIGR) compare
DVU2021 +0.4 0.7 hypothetical protein (TIGR) compare
DVU1762 +0.4 0.9 membrane protein, putative (TIGR) compare
DVU0298 +0.4 1.1 hypothetical protein (TIGR) compare
DVU2074 +0.4 1.0 chemotaxis protein CheW (TIGR) compare
DVUA0146 +0.4 1.3 hypothetical protein (TIGR) compare
DVU2462 +0.4 2.2 oligopeptide ABC transporter, permease protein (TIGR) compare
DVU2993 +0.4 3.0 glycosyl transferase, group 1/2 family protein (TIGR) compare
DVU0614 +0.4 1.9 hypothetical protein (TIGR) compare
DVU0989 +0.4 1.3 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU3056 +0.4 1.6 conserved hypothetical protein (TIGR) compare
DVU2703 +0.4 0.3 hypothetical protein (TIGR) compare
DVU3177 +0.4 2.1 hypothetical protein (TIGR) compare
DVU0428 +0.4 1.5 conserved hypothetical protein (TIGR) compare
DVU3322 +0.4 1.2 conserved domain protein (TIGR) compare
DVU0063 +0.4 0.6 transcriptional regulator, MarR family (TIGR) compare
DVU0032 +0.4 1.3 conserved hypothetical protein (TIGR) compare
DVU0399 +0.3 1.8 hypothetical protein (TIGR) compare
DVU2583 +0.3 1.4 lipoprotein, putative (TIGR) compare
DVU2846 +0.3 0.8 hypothetical protein (TIGR) compare
DVU0909 +0.3 1.3 hypothetical protein (TIGR) compare
DVU1916 +0.3 0.8 hypothetical protein (TIGR) compare
DVU2423 +0.3 1.4 transcriptional regulator, putative (TIGR) compare
DVU2553 nifU-3 +0.3 0.7 NifU family protein (TIGR) compare
DVU0715 livG +0.3 1.3 branched-chain amino acid ABC transporter, ATP binding protein (TIGR) compare
DVU2203 +0.3 0.5 endoribonuclease, L-PSP family (TIGR) compare
DVU0368 +0.3 0.9 hypothetical protein (TIGR) compare
DVU0555 +0.3 0.4 hypothetical protein (TIGR) compare
DVU1967 rrf2 +0.3 2.0 transcriptional regulator, rrf2 protein, putative (TIGR) compare
DVU2331 +0.3 1.5 Smr family protein (TIGR) compare
DVU0911 truA +0.3 1.6 tRNA pseudouridine synthase A (TIGR) compare
DVU1068 +0.3 1.2 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU1174 +0.3 0.4 hypothetical protein (TIGR) compare
DVUA0011 nifK +0.3 1.7 nitrogenase molybdenum-iron protein beta chain (TIGR) compare
DVU1551 +0.3 2.0 HD domain protein (TIGR) compare
DVU2785 pdhR +0.3 1.6 transcriptional regulator, GntR family (TIGR) compare
DVU0442 +0.3 1.9 phoH-related protein (TIGR) compare
DVU0095 potD-1 +0.3 2.0 polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR) compare
DVU0303 +0.3 1.2 hypothetical protein (TIGR) compare
DVU2748 cobM +0.3 0.9 precorrin-4 C11-methyltransferase (TIGR) compare
DVU2947 +0.3 1.1 anaerobic ribonucleoside-triphosphate reductase, putative (TIGR) compare
DVU2207 +0.3 0.2 hypothetical protein (TIGR) compare
DVU2965 +0.3 1.4 hypothetical protein (TIGR) compare
DVUA0053 +0.3 1.6 conserved hypothetical protein (TIGR) compare
DVU3117 +0.3 0.8 hypothetical protein (TIGR) compare
DVU0657 +0.3 0.7 heat shock protein, Hsp20 family (TIGR) compare
DVU2592 +0.3 1.2 hypothetical protein (TIGR) compare
DVU1816 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU0610 +0.3 2.3 conserved hypothetical protein (TIGR) compare
DVUA0118 +0.3 1.1 type III secretion protein, YopL family (TIGR) compare
DVU1996 +0.3 1.1 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare


Specific Phenotypes

For 1 genes in this experiment

For fermentative growth Sodium pyruvate in Desulfovibrio vulgaris Hildenborough JW710

For fermentative growth Sodium pyruvate across organisms