Experiment set9IT058 for Sinorhizobium meliloti 1021

Compare to:

Sodium succinate dibasic hexahydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc02084 +1.8 1.9 biopolymer transport transmembrane protein compare
SMc02861 +1.5 3.0 phosphate transporter compare
SMc00650 +1.4 2.8 hypothetical protein compare
SMc04296 +1.3 0.8 cell division protein FtsZ compare
SMc04327 +1.3 1.6 hypothetical protein compare
SMc00854 +1.1 2.1 hypothetical protein compare
SM_b21679 +1.1 1.3 hypothetical protein compare
SM_b20055 +1.0 1.4 transcriptional regulator compare
SMc00352 +1.0 1.8 acetyltransferase compare
SMc03184 +1.0 1.4 PH adaptation potassium efflux system G transmembrane protein compare
SMc02693 +1.0 1.4 peptidyl-tRNA hydrolase compare
SMa0789 +0.9 1.7 GntR family transcriptional regulator compare
SMc03800 +0.9 2.7 hypothetical protein compare
SMa1323 +0.9 1.7 Transcription regulator compare
SM_b20547 +0.9 2.5 hypothetical protein compare
SMa1002 +0.9 1.0 hypothetical protein compare
SMc00334 +0.9 0.8 cytidylate kinase compare
SMc03899 +0.9 1.2 hypothetical protein compare
SMa1174 +0.9 1.6 hypothetical protein compare
SM_b20075 +0.9 1.6 hypothetical protein compare
SMa1643 +0.9 2.1 hypothetical protein compare
SMa0543 +0.8 1.1 hypothetical protein compare
SMc02485 +0.8 1.6 signal peptide protein compare
SMc02730 +0.8 4.5 hypothetical protein compare
SMc00099 +0.8 1.3 alkylphosphonate uptake protein compare
SMa0126 +0.8 1.5 CspA8 Cold shock family protein compare
SMc00691 +0.8 2.1 site-specific tyrosine recombinase XerD compare
SMc02225 +0.8 2.4 hypothetical protein compare
SMc02639 +0.8 1.6 transcriptional regulator compare
SMc00941 +0.8 1.5 hypothetical protein compare
SMc00605 +0.8 1.3 hypothetical protein compare
SM_b21170 +0.8 2.2 guanylate kinase compare
SMc00351 +0.8 1.3 hypothetical protein compare
SM_b20307 +0.7 1.0 dihydroxyacetone kinase compare
SMc00794 +0.7 4.7 two-component response regulator compare
SMc02308 +0.7 2.1 hypothetical protein compare
SMc05011 +0.7 2.0 bacteriophage DNA-binding transcription regulator compare
SMc04043 +0.7 4.0 hypothetical protein compare
SMc02729 +0.7 5.2 hypothetical protein compare
SMa0265 +0.7 1.6 dehydrogenase compare
SMc00806 +0.7 2.0 hypothetical protein compare
SMc04216 +0.7 2.2 hypothetical protein compare
SMc01644 +0.7 1.9 ABC transporter permease compare
SM_b21633 +0.7 1.0 enoyl-CoA hydratase compare
SMc03066 +0.7 1.6 hypothetical protein compare
SMa1158 +0.7 1.7 hypothetical protein compare
SMa0647 +0.7 1.8 hypothetical protein compare
SMc01833 +0.7 2.7 hypothetical protein compare
SMc01354 +0.7 3.4 metal-dependent hydrolase compare
SMa1153 +0.7 2.1 hypothetical protein compare
SMc04246 +0.7 0.8 transmembrane signal peptide protein compare
SMc02052 +0.6 0.8 hypothetical protein compare
SM_b20123 +0.6 1.6 transcriptional regulator compare
SMc03127 +0.6 0.9 ABC transporter permease compare
SMa1093 +0.6 1.7 hypothetical protein compare
SMc02787 +0.6 1.4 hypothetical protein compare
SMc01023 +0.6 2.3 triosephosphate isomerase compare
SM_b20725 +0.6 1.5 hypothetical protein compare
SMc00404 +0.6 0.9 hypothetical protein compare
SMc03242 +0.6 1.4 GTP-binding protein compare
SMc02495 +0.6 0.7 translaldolase compare
SMc01337 +0.6 0.9 hypothetical protein compare
SM_b20143 +0.6 1.0 oligopeptide ABC transporter permease compare
SMc03941 +0.6 1.4 hypothetical protein compare
SMc02856 +0.6 3.5 penicillin-binding protein compare
SMa1960 +0.6 1.7 hypothetical protein compare
SMc03289 +0.6 1.0 hypothetical protein compare
SMc02504 +0.6 3.0 transcriptional regulator compare
SMc00084 +0.6 3.0 hypothetical protein compare
SMc02306 +0.6 0.9 hypothetical protein compare
SMc02718 +0.6 1.0 hypothetical protein compare
SMc02108 +0.6 2.6 hypothetical protein compare
SMa2081 +0.6 1.9 ABC transporter ATP-binding protein compare
SMc01768 +0.6 2.4 transcriptional regulator compare
SM_b21412 +0.6 1.2 hypothetical protein compare
SMa1232 +0.6 2.4 NapC membrane-bound tetraheme cytochrome c subunit compare
SM_b21479 +0.6 1.3 hypothetical protein compare
SMc00974 +0.6 1.3 RNA methyltransferase compare
SMc01575 +0.6 4.5 hypothetical protein compare
SM_b20427 +0.6 1.9 amino acid ABC transporter ATP-binding protein compare
SMc01757 +0.6 1.5 hypothetical protein compare
SMc03850 +0.6 0.5 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02140 +0.6 0.3 phosphate regulon transcriptional regulatory protein compare
SM_b21475 +0.6 1.3 hypothetical protein compare
SMc00496 +0.6 0.8 hypothetical protein compare
SM_b21212 +0.6 1.5 hypothetical protein compare
SM_b21651 +0.6 2.5 plasmid stability protein compare
SMa0149 +0.5 1.9 transcription elongation factor regulatory protein compare
SMa1902 +0.5 1.8 hypothetical protein compare
SMa1933 +0.5 1.8 LysR family transcriptional regulator compare
SM_b21286 +0.5 1.8 xanthine dehydrogenase compare
SM_b20374 +0.5 1.5 substrate-binding protein compare
SMc01577 +0.5 1.1 hypothetical protein compare
SMa0753 +0.5 0.5 hypothetical protein compare
SMc00396 +0.5 1.4 hypothetical protein compare
SMc01241 +0.5 1.4 hypothetical protein compare
SMc03970 +0.5 3.1 hypothetical protein compare
SMc01364 +0.5 0.7 DNA topoisomerase I compare
SMc01519 +0.5 1.3 hypothetical protein compare
SM_b21096 +0.5 0.8 amino acid transporter ABC transporter ATP-binding protein compare
SMa0349 +0.5 1.3 hypothetical protein compare
SMc01472 +0.5 0.8 50S ribosomal protein L11 methyltransferase compare
SMc00973 +0.5 2.2 hypothetical protein compare
SMc02318 +0.5 1.2 hypothetical protein compare
SMc02388 +0.5 1.5 hypothetical protein compare
SM_b20553 +0.5 1.6 hypothetical protein compare
SM_b21296 +0.5 1.6 hypothetical protein compare
SM_b20322 +0.5 1.7 TRAP-type small permease component compare
SMc01357 +0.5 1.5 hypothetical protein compare
SMc01131 +0.5 2.1 hypothetical protein compare
SM_b20435 +0.5 1.9 hypothetical protein compare
SM_b20519 +0.5 1.7 hypothetical protein compare
SM_b21329 +0.5 1.8 hypothetical protein compare
SMa1073 +0.5 1.1 TRm23b IS ATP-binding protein compare
SMc01103 +0.5 2.0 Ribokinase (EC 2.7.1.15) (from data) compare
SMc03950 +0.5 2.6 proton-translocating nicotinamide nucleotide transhydrogenase subunit protein compare
SM_b20377 +0.5 2.5 translation initiation inhibitor protein compare
SMc01504 +0.5 2.4 two-component response regulator compare
SMa0750 +0.5 2.6 LysR family transcriptional regulator compare
SM_b21029 +0.5 2.0 hypothetical protein compare
SMa5022 +0.5 2.4 hypothetical protein compare
SMc01144 +0.5 1.4 ribonuclease PH compare
SMc01506 +0.5 2.9 RNA polymerase sigma factor compare
SMc00013 +0.5 0.5 cytochrome C oxidase subunit III transmembrane protein compare
SM_b22005 +0.5 0.8 hypothetical protein compare
SMc01244 +0.5 1.2 tRNA-Ala compare
SMa1101 +0.5 1.1 hypothetical protein compare
SMa1162 +0.5 2.7 hypothetical protein compare
SMc01797 +0.5 2.8 acetyltransferase compare
SMa1171 +0.5 1.7 hypothetical protein compare
SMc02178 +0.5 1.3 hypothetical protein compare
SMc00147 +0.5 1.5 hypothetical protein compare
SM_b20876 +0.5 2.2 hypothetical protein compare
SMa0740 +0.5 1.2 hypothetical protein compare
SMc00431 +0.5 1.3 hypothetical protein compare
SMc00591 +0.5 2.1 hypothetical protein compare
SMa1188 +0.5 1.7 NosX accesory protein compare
SMa1161 +0.5 1.4 hypothetical protein compare
SMa2168 +0.5 0.7 tRNA-Met compare
SM_b20774 +0.5 1.0 hypothetical protein compare
SMc03834 +0.5 0.7 pterin-4-alpha-carbinolamine dehydratase compare
SMc00032 +0.5 1.4 hypothetical protein compare
SMc00369 +0.5 0.7 oxidoreductase compare
SMa0222 +0.5 0.5 GntR family transcriptional regulator compare
SMc01698 +0.5 2.2 oxidoreductase compare
SMa0683 +0.5 2.0 Cation efflux protein compare
SM_b20303 +0.5 2.0 hypothetical protein compare
SMc01424 +0.5 1.8 nitrile hydratase subunit alpha protein compare
SMa0009 +0.5 2.6 formate dehydrogenase subunit epsilon compare
SM_b20125 +0.5 1.7 sugar ABC transporter permease compare
SMc01275 +0.5 2.7 ribosomal large subunit pseudouridine synthase C protein compare
SMa0776 +0.4 1.0 TRm23b IS ATP-binding protein compare
SMc01464 +0.4 2.0 hypothetical protein compare
SMa1160 +0.4 1.9 hypothetical protein compare
SMc04391 +0.4 0.7 3-ketoacyl-ACP reductase compare
SMc00796 +0.4 2.0 hypothetical protein compare
SMc01584 +0.4 1.9 hypothetical protein compare
SMc00030 +0.4 1.9 hypothetical protein compare
SMc03119 +0.4 1.6 ABC transporter ATP-binding protein compare
SM_b21421 +0.4 1.4 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc03001 +0.4 2.0 ABC transporter permease compare
SM_b20257 +0.4 1.3 adenylate cyclase compare
SMc01093 +0.4 2.0 esterase compare
SM_b20397 +0.4 1.6 oxidoreductase compare
SMa5011 +0.4 1.1 oxidoreductase compare
SM_b20343 +0.4 1.1 isoquinoline 1-oxidoreductase compare
SMc00329 +0.4 0.9 iron response regulator protein compare
SMc02893 +0.4 1.4 transcriptional regulator compare
SMc02273 +0.4 4.0 fatty acid synthase transmembrane protein compare
SMc02739 +0.4 1.0 glycine betaine transport ATP-binding ABC transporter protein compare
SMc01099 +0.4 0.7 tRNA pseudouridine synthase A compare
SMc03837 +0.4 1.9 ABC transporter ATP-binding protein compare
SMc01765 +0.4 0.8 hypothetical protein compare
SMc01116 +0.4 2.9 acyltransferase transmembrane protein compare
SMa0063 +0.4 1.1 GntR family transcriptional regulator compare
SMc04259 +0.4 2.0 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc03031 +0.4 1.3 flagellar basal body P-ring biosynthesis protein FlgA compare
SMc01153 +0.4 0.6 enoyl-CoA hydratase compare
SMc02260 +0.4 0.7 ABC transporter ATP-binding protein compare
SMa0838 +0.4 1.4 SyrA protein involved in EPS production compare
SMc00174 +0.4 2.0 hypothetical protein compare
SM_b20647 +0.4 1.5 hypothetical protein compare
SMc02134 +0.4 1.4 hypothetical protein compare
SMc05013 +0.4 1.2 hypothetical protein compare
SMc01024 +0.4 0.6 preprotein translocase subunit SecG compare
SMc02321 +0.4 2.3 L-rhamnose isomerase (EC 5.3.1.14) (from data) compare
SM_b21210 +0.4 2.5 two-component response regulator protein compare
SMc03092 +0.4 1.1 transcriptional regulator compare
SMa1959 +0.4 2.0 hypothetical protein compare
SMc00589 +0.4 2.2 hypothetical protein compare
SMa0112 +0.4 1.2 hypothetical protein compare
SMa1163 +0.4 2.6 Cation transport P-type ATPase compare
SM_b20464 +0.4 1.6 hypothetical protein compare
SM_b20746 +0.4 0.6 hypothetical protein compare
SMc00177 +0.4 2.2 hypothetical protein compare
SMc00143 +0.4 0.9 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SMa1844 +0.4 1.6 aldehyde compare
SMa0572 +0.4 2.1 hypothetical protein compare
SMc00345 +0.4 1.5 hypothetical protein compare
SMa0645 +0.4 0.8 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium succinate dibasic hexahydrate in Sinorhizobium meliloti 1021

For carbon source Sodium succinate dibasic hexahydrate across organisms