Experiment set9IT056 for Sinorhizobium meliloti 1021

Compare to:

D-Ribose carbon source

200 most important genes:

  gene name fitness t score description  
SMc01494 -7.5 -13.6 phosphoserine phosphatase compare
SMc02766 -7.2 -16.7 tryptophan synthase subunit beta compare
SMc01054 -7.0 -4.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc04002 -6.7 -9.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02767 -6.7 -9.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02245 -6.5 -4.5 dihydroorotate dehydrogenase 2 compare
SMc04026 -6.3 -8.7 glutamate synthase compare
SMc03797 -6.3 -9.6 homoserine O-succinyltransferase compare
SMc00993 -6.2 -9.4 phosphoribosylamine--glycine ligase compare
SMc00640 -6.1 -6.0 phosphoserine aminotransferase compare
SMc00917 -5.9 -5.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00494 -5.9 -2.3 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02570 -5.8 -7.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc04028 -5.7 -15.1 glutamate synthase compare
SMc00614 -5.7 -7.7 phosphoribosylglycinamide formyltransferase compare
SMc04405 -5.7 -12.1 3-isopropylmalate dehydrogenase compare
SMc01843 -5.6 -14.1 5,10-methylenetetrahydrofolate reductase compare
SMc03112 -5.6 -17.3 B12-dependent methionine synthase compare
SMc00235 -5.5 -8.9 anthranilate phosphoribosyltransferase compare
SMc02725 -5.4 -12.9 anthranilate synthase compare
SMc02765 -5.4 -11.7 tryptophan synthase subunit alpha compare
SMc00495 -5.4 -6.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01004 -5.3 -11.2 phosphoribosyl-AMP cyclohydrolase compare
SMc01431 -5.3 -13.6 acetolactate synthase 3 catalytic subunit compare
SMc02717 -5.3 -14.8 2-isopropylmalate synthase compare
SMc02123 -5.2 -4.6 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02124 -5.1 -14.8 nitrite reductase compare
SMc00488 -5.1 -18.3 phosphoribosylformylglycinamidine synthase II compare
SMc00090 -5.0 -12.6 sulfate adenylyltransferase compare
SMc02899 -5.0 -12.9 prephenate dehydratase compare
SMc03895 -5.0 -18.5 pyruvate carboxylase compare
SMc00131 -5.0 -16.3 transcriptional regulator compare
SMc04045 -4.9 -9.5 dihydroxy-acid dehydratase compare
SMc02217 -4.9 -7.4 O-succinylhomoserine sulfhydrylase compare
SMc00615 -4.8 -8.5 phosphoribosylaminoimidazole synthetase compare
SMc03776 -4.6 -4.5 gamma-glutamyl kinase compare
SMc04088 -4.6 -10.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02569 -4.6 -4.2 imidazole glycerol phosphate synthase subunit HisF compare
SMc00412 -4.5 -4.4 orotidine 5'-phosphate decarboxylase compare
SMc00091 -4.5 -12.1 sulfate adenylyltransferase compare
SMc00918 -4.5 -9.2 ATP phosphoribosyltransferase regulatory subunit compare
SMc04001 -4.5 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc03070 -4.5 -4.3 glucose-6-phosphate 1-dehydrogenase compare
SMc00236 -4.5 -7.4 Indole-3-glycerol phosphate synthase compare
SMc03823 -4.4 -8.4 isopropylmalate isomerase large subunit compare
SMc00554 -4.4 -8.5 amidophosphoribosyltransferase compare
SMc01726 -4.4 -7.8 acetylglutamate kinase compare
SMc02137 -4.4 -4.2 ornithine carbamoyltransferase compare
SMc00092 -4.3 -11.2 phosphoadenosine phosphosulfate reductase compare
SMc03777 -4.3 -8.2 gamma-glutamyl phosphate reductase compare
SMc00293 -4.3 -11.9 homoserine dehydrogenase compare
SMc02165 -4.3 -5.8 orotate phosphoribosyltransferase compare
SMc02572 -4.2 -4.4 imidazole glycerol phosphate synthase subunit HisH compare
SMa1635 -4.1 -2.8 hypothetical protein compare
SMc02172 -4.1 -11.2 transcriptional regulator compare
SMc00493 -4.1 -5.1 phosphoribosylformylglycinamidine synthase I compare
SMc03795 -3.9 -2.1 isopropylmalate isomerase small subunit compare
SMc00711 -3.9 -4.1 cyclohexadienyl dehydrogenase compare
SMc00641 -3.7 -6.0 D-3-phosphoglycerate dehydrogenase compare
SMc01801 -3.6 -3.3 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc01770 -3.5 -1.6 serine hydroxymethyltransferase compare
SMc00017 -3.5 -1.8 homoserine kinase compare
SMc01360 -3.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc02166 -3.5 -9.6 dihydroorotase compare
SMc01053 -3.4 -4.6 siroheme synthase compare
SMc01103 -3.4 -5.4 Ribokinase (EC 2.7.1.15) (from data) conserved
SMc04346 -3.4 -5.1 ketol-acid reductoisomerase compare
SM_b21177 -3.3 -10.2 phosphate uptake ABC transporter ATP-binding protein compare
SM_b21174 -3.3 -5.0 phosphate uptake ABC transporter permease compare
SMc02246 -3.2 -1.2 hypothetical protein compare
SMc02707 -3.2 -4.9 hypothetical protein compare
SM_b21176 -3.2 -4.6 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc02640 -3.1 -5.1 UDP-glucuronic acid epimerase compare
SM_b21175 -3.1 -5.7 phosphate uptake ABC transporter permease compare
SMc02307 -2.9 -8.7 histidinol dehydrogenase compare
SMc02755 -2.7 -6.7 S-adenosyl-L-homocysteine hydrolase compare
SMc02138 -2.7 -4.2 acetylornithine transaminase compare
SMc04005 -2.7 -7.2 pyruvate kinase compare
SMc00876 -2.5 -2.9 ATP-binding MRP protein compare
SMc00294 -2.5 -10.9 aminotransferase compare
SMc01622 -2.5 -7.3 oxidoreductase compare
SMc00982 -2.4 -5.9 dioxygenase compare
SMc01206 -2.4 -1.8 queuine tRNA-ribosyltransferase compare
SMc03979 -2.4 -3.0 glyceraldehyde-3-phosphate dehydrogenase compare
SMc01430 -2.4 -3.5 acetolactate synthase 3 regulatory subunit compare
SMc02641 -2.3 -2.2 UDP-glucose 6-dehydrogenase compare
SMc01361 -2.3 -2.2 dihydroorotase compare
SMc02574 -2.2 -3.8 imidazoleglycerol-phosphate dehydratase compare
SMa0734 -2.1 -2.5 hypothetical protein compare
SMc01124 -2.1 -7.4 PII uridylyl-transferase compare
SMc01880 -2.1 -1.4 pantoate--beta-alanine ligase compare
SMc00619 -2.1 -1.4 hypothetical protein compare
SMc03978 -2.0 -1.4 transketolase compare
SMc00511 -1.9 -3.7 D-ribulose-5-phosphate 3-epimerase compare
SMc01881 -1.9 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMa1323 -1.9 -2.5 Transcription regulator compare
SMc02753 -1.8 -1.0 PTS system transporter subunit IIA compare
SMc01220 -1.8 -3.4 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00404 -1.7 -1.5 hypothetical protein compare
SMa1053 -1.7 -2.0 hypothetical protein compare
SMc02055 -1.7 -1.8 phytoene synthase compare
SMc01028 -1.7 -10.3 phosphopyruvate hydratase compare
SMc03981 -1.6 -3.2 phosphoglycerate kinase compare
SMc01315 -1.5 -1.4 hypothetical protein compare
SMc02232 -1.5 -2.4 hypothetical protein compare
SMc00726 -1.5 -0.8 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc03068 -1.5 -7.3 phosphogluconate dehydratase compare
SMc00580 -1.4 -1.9 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02141 -1.4 -0.9 phosphate transporter PhoU compare
SMa5033 -1.4 -1.3 hypothetical protein compare
SMc03763 -1.3 -0.9 cytosine-specific methyltransferase compare
SMc02451 -1.3 -1.3 hypothetical protein compare
SMc01578 -1.3 -7.2 aspartate aminotransferase compare
SMc02850 -1.3 -1.5 DNA polymerase I compare
SMc00928 -1.3 -0.8 signal peptide protein compare
SMc01568 -1.3 -1.2 hypothetical protein compare
SMc04213 -1.3 -2.2 diacylglycerol kinase compare
SMc03229 -1.3 -1.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00414 -1.3 -9.9 hypothetical protein compare
SMc02112 -1.3 -4.6 hypothetical protein compare
SM_b20148 -1.3 -4.2 transcriptional regulator compare
SM_b21551 -1.3 -1.2 hypothetical protein compare
SMc04348 -1.3 -1.2 transcriptional regulator compare
SMc03924 -1.2 -6.3 glycogen synthase compare
SMc02694 -1.2 -1.6 ATP-dependent Clp protease adaptor compare
SMc00073 -1.2 -1.3 hypothetical protein compare
SMa1017 -1.2 -2.0 hypothetical protein compare
SMc02234 -1.2 -1.5 hypothetical protein compare
SMc02858 -1.2 -0.6 chaperone protein DnaJ compare
SMc00981 -1.1 -5.0 ferredoxin protein compare
SMc01842 -1.1 -1.3 methyltransferase transcription regulator protein compare
SMc01207 -1.1 -1.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02983 -1.1 -4.1 ornithine, DAP, or arginine decarboxylase compare
SMc01119 -1.1 -1.8 hypothetical protein compare
SMc04236 -1.0 -3.5 glycine-rich cell wall structural transmembrane protein compare
SMc00565 -1.0 -0.7 50S ribosomal protein L9 compare
SMc01709 -1.0 -1.6 signal peptide protein compare
SMc03153 -1.0 -3.1 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc01579 -1.0 -1.3 hypothetical protein compare
SMc00189 -1.0 -3.2 cytochrome C1 protein compare
SMc02142 -1.0 -2.3 phosphate transporter ATP-binding protein compare
SMc00514 -1.0 -2.9 monooxygenase compare
SMc03899 -1.0 -0.9 hypothetical protein compare
SM_b20302 -1.0 -2.0 hypothetical protein compare
SMc01974 -1.0 -2.3 transcriptional regulator compare
SMc00427 -1.0 -1.1 peptide chain release factor RF-3 protein compare
SMc02107 -1.0 -1.1 hypothetical protein compare
SMc01522 -1.0 -1.6 hypothetical protein compare
SMc02171 -1.0 -2.1 periplasmic binding ABC transporter protein compare
SMc00555 -0.9 -1.1 colicin V production transmembrane protein compare
SMc02102 -0.9 -2.0 hypothetical protein compare
SMc01091 -0.9 -1.8 hypothetical protein compare
SMc00334 -0.9 -0.8 cytidylate kinase compare
SMa0293 -0.9 -3.9 hypothetical protein compare
SMc02868 -0.9 -1.6 multidrug efflux system protein compare
SMc02373 -0.9 -1.1 hypothetical protein compare
SMc02838 -0.9 -3.8 phosphoglyceromutase compare
SMc02778 -0.9 -1.1 hydroxyacid aldolase compare
SMc02385 -0.9 -1.5 hypothetical protein compare
SM_b20370 -0.9 -2.8 ATP-binding transport protein compare
SMa0050 -0.9 -1.5 hypothetical protein compare
SM_b21687 -0.9 -2.2 hypothetical protein compare
SMc00143 -0.9 -1.7 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SMc00302 -0.9 -0.9 hypothetical protein compare
SMc02434 -0.9 -1.7 hypothetical protein compare
SMc03842 -0.9 -2.4 hypothetical protein compare
SMc00823 -0.9 -1.8 hypothetical protein compare
SM_b20105 -0.9 -1.3 transcriptional regulator compare
SM_b21347 -0.8 -1.1 pectin degradation protein compare
SMa1442 -0.8 -3.5 GntR family transcriptional regulator compare
SMc02521 -0.8 -2.5 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc02280 -0.8 -0.9 hypothetical protein compare
SMc04121 -0.8 -1.4 uracil phosphoribosyltransferase compare
SMc02620 -0.8 -4.2 hypothetical protein compare
SMc02495 -0.8 -0.8 translaldolase compare
SMc00166 -0.8 -0.9 oxidoreductase NAD protein compare
SM_b20773 -0.8 -1.7 GntR family transcriptional regulator compare
SMa1297 -0.8 -2.3 hypothetical protein compare
SM_b20904 -0.8 -2.7 sugar uptake ABC transporter ATP-binding protein compare
SMc03010 -0.8 -1.6 chemotaxis-specific methylesterase compare
SMc02228 -0.8 -3.6 acetyl-CoA acetyltransferase compare
SMa1036 -0.8 -3.3 hypothetical protein compare
SMc02051 -0.8 -1.2 hypothetical protein compare
SMc01440 -0.8 -3.3 hydrolase serine protease transmembrane protein compare
SMc03030 -0.8 -2.9 flagellar basal body rod protein FlgG compare
SMc04042 -0.8 -3.4 monophosphatase compare
SMc03890 -0.8 -3.0 transcriptional regulator compare
SMc02683 -0.8 -1.1 hypothetical protein compare
SM_b21524 -0.8 -1.3 septum formation inhibitor compare
SMc02041 -0.8 -2.2 short chain dehydrogenase compare
SMc03053 -0.8 -1.2 flagellar biosynthesis protein FliQ compare
SMa0087 -0.8 -1.7 hypothetical protein compare
SMc02169 -0.7 -1.2 ABC transporter ATP-binding protein compare
SMa0776 -0.7 -1.4 TRm23b IS ATP-binding protein compare
SMc02164 -0.7 -1.6 fructokinase compare
SMc01120 -0.7 -2.2 hypothetical protein compare
SMc03826 -0.7 -0.5 argininosuccinate synthase compare
SMc00067 -0.7 -3.4 outer-membranne lipoprotein compare
SM_b20687 -0.7 -2.6 hypothetical protein compare
SMc01006 -0.7 -1.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Ribose in Sinorhizobium meliloti 1021

For carbon source D-Ribose across organisms