Experiment set9IT054 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Totarol 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.6 -5.5 SirA-like protein compare
Psyr_0951 -4.2 -4.8 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -4.1 -12.6 phosphomethylpyrimidine kinase, putative compare
Psyr_0034 -3.5 -3.4 tryptophan synthase, beta chain compare
Psyr_4740 -3.2 -8.4 thiazole-phosphate synthase compare
Psyr_4683 -3.0 -7.7 dethiobiotin synthase compare
Psyr_4687 -2.9 -11.8 biotin synthase compare
Psyr_4341 -2.9 -8.2 thiamine-phosphate diphosphorylase compare
Psyr_0033 -2.8 -3.3 tryptophan synthase, alpha chain compare
Psyr_4684 -2.7 -3.8 biotin synthesis protein BioC compare
Psyr_4091 -2.7 -6.1 8-oxo-dGTPase compare
Psyr_0454 -2.7 -7.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3419 -2.5 -6.2 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4686 -2.4 -8.6 8-amino-7-oxononanoate synthase compare
Psyr_1419 -2.3 -4.4 preQ(0) biosynthesis protein QueC compare
Psyr_0835 -2.2 -7.4 transcriptional regulator, TraR/DksA family compare
Psyr_4991 -2.2 -3.2 hypothetical protein compare
Psyr_4519 -2.1 -7.3 General substrate transporter:Major facilitator superfamily compare
Psyr_2980 -2.0 -5.0 UDP-glucose pyrophosphorylase compare
Psyr_5132 -1.8 -3.8 Glucose-inhibited division protein A subfamily compare
Psyr_5133 -1.7 -4.8 tRNA modification GTPase trmE compare
Psyr_0531 -1.7 -3.7 LmbE-like protein compare
Psyr_1613 -1.6 -4.4 septum site-determining protein MinC compare
Psyr_4203 -1.6 -2.2 SsrA-binding protein compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_3193 -1.5 -3.5 Transcription factor jumonji, jmjC compare
Psyr_4460 -1.4 -2.3 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0487 -1.3 -2.6 glutathione synthase compare
Psyr_4580 -1.3 -3.8 anthranilate phosphoribosyltransferase compare
Psyr_0529 -1.3 -5.0 Glycosyl transferase, group 1 compare
Psyr_2591 -1.3 -5.4 transport system permease protein compare
Psyr_1663 -1.3 -4.2 phosphoribosylanthranilate isomerase compare
Psyr_1378 -1.3 -2.4 RecA protein compare
Psyr_1373 -1.3 -2.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_2590 -1.3 -3.1 Periplasmic binding protein compare
Psyr_2227 -1.3 -1.8 conserved hypothetical protein compare
Psyr_1017 -1.3 -1.2 type III effector HopJ1 compare
Psyr_2501 -1.3 -1.1 Hemerythrin compare
Psyr_3208 -1.3 -2.3 NADH dehydrogenase subunit M compare
Psyr_1408 -1.2 -2.8 Holliday junction endonuclease RuvC compare
Psyr_0475 -1.2 -3.3 Protein of unknown function YGGT compare
Psyr_0444 -1.2 -1.3 Malonate decarboxylase delta subunit compare
Psyr_1747 -1.2 -4.3 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2137 -1.2 -2.5 molybdopterin molybdochelatase compare
Psyr_4194 -1.2 -3.8 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3675 -1.2 -3.2 adenosylcobinamide kinase compare
Psyr_1140 -1.2 -2.7 Disulfide bond formation protein DsbB compare
Psyr_2872 -1.1 -2.8 hypothetical protein compare
Psyr_2582 -1.1 -6.0 TonB-dependent siderophore receptor compare
Psyr_4051 -1.1 -1.7 transcriptional regulator, ArsR family compare
Psyr_0571 -1.1 -3.7 tRNA isopentenyltransferase compare
Psyr_1614 -1.1 -0.7 lipid A biosynthesis acyltransferase compare
Psyr_3906 -1.1 -1.8 regulatory protein, DeoR compare
Psyr_0528 -1.1 -2.2 Carbamoyltransferase compare
Psyr_1371 -1.1 -5.5 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0575 -1.1 -1.9 protease FtsH subunit HflC compare
Psyr_0041 -1.1 -2.2 Protein of unknown function DUF1161 compare
Psyr_2854 -1.0 -4.0 conserved hypothetical protein compare
Psyr_3133 -1.0 -1.8 Amidohydrolase 2 compare
Psyr_0383 -1.0 -0.9 Twin-arginine translocation protein TatB compare
Psyr_2594 -1.0 -1.5 unknown conserved protein in bacilli compare
Psyr_3289 -1.0 -2.1 3-ketoacyl-CoA thiolase compare
Psyr_1816 -1.0 -2.9 transcriptional regulator, GntR family compare
Psyr_1688 -1.0 -1.5 Protein of unknown function DUF1315 compare
Psyr_1024 -1.0 -3.2 Flavodoxin/nitric oxide synthase compare
Psyr_5067 -0.9 -4.0 conserved hypothetical protein compare
Psyr_1910 -0.9 -3.5 VacJ-like lipoprotein compare
Psyr_3418 -0.9 -3.8 PilT protein, N-terminal compare
Psyr_1251 -0.9 -3.2 quinoprotein compare
Psyr_2265 -0.9 -3.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3947 -0.9 -1.8 Methyltransferase, putative compare
Psyr_3020 -0.9 -1.9 precorrin-4 C11-methyltransferase compare
Psyr_3665 -0.9 -3.3 conserved hypothetical protein compare
Psyr_0936 -0.9 -6.2 Glycosyl transferase, group 1 compare
Psyr_3667 -0.9 -2.3 conserved hypothetical protein compare
Psyr_2668 -0.9 -2.3 Helix-turn-helix, Fis-type compare
Psyr_2150 -0.9 -2.9 protein of unknown function DUF903 compare
Psyr_0831 -0.9 -1.2 Two-component response regulator CbrB compare
Psyr_0303 -0.9 -2.6 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_2743 -0.9 -2.6 Lysine exporter protein (LYSE/YGGA) compare
Psyr_3198 -0.9 -1.6 NADH dehydrogenase subunit B compare
Psyr_0772 -0.9 -3.0 Protein of unknown function DUF1355 compare
Psyr_4822 -0.9 -2.6 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1152 -0.9 -1.5 transcriptional regulator, ArsR family compare
Psyr_0817 -0.9 -2.8 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_2543 -0.9 -2.0 conserved hypothetical protein compare
Psyr_2386 -0.9 -1.4 hypothetical protein compare
Psyr_3199 -0.9 -2.2 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_3681 -0.9 -1.6 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_2897 -0.8 -4.4 regulatory protein, LuxR:Response regulator receiver compare
Psyr_4512 -0.8 -4.1 putative phage-related protein compare
Psyr_4151 -0.8 -1.2 Phosphocarrier HPr protein compare
Psyr_0917 -0.8 -5.6 ABC-2 compare
Psyr_3258 -0.8 -2.7 conserved hypothetical protein compare
Psyr_1357 -0.8 -2.7 RNase HII compare
Psyr_1372 -0.8 -3.4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_1418 -0.8 -1.8 Radical SAM compare
Psyr_3842 -0.8 -3.8 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_0549 -0.8 -1.7 Metallophosphoesterase compare
Psyr_0394 -0.8 -2.0 Heat shock protein HslU compare
Psyr_2059 -0.8 -2.3 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_0574 -0.8 -2.8 protease FtsH subunit HflK compare
Psyr_3312 -0.8 -2.9 transcriptional regulator, LysR family compare
Psyr_1864 -0.8 -2.9 spermidine synthase compare
Psyr_2383 -0.8 -1.7 Protein of unknown function DUF72 compare
Psyr_2095 -0.8 -3.1 Conserved TM helix compare
Psyr_4158 -0.8 -4.2 conserved hypothetical protein compare
Psyr_4622 -0.8 -2.4 Nucleotidyl transferase compare
Psyr_3014 -0.8 -2.3 protoporphyrin IX magnesium-chelatase compare
Psyr_0378 -0.8 -4.6 Glycosyl transferase, family 2 compare
Psyr_3311 -0.8 -2.7 Virulence factor MVIN-like protein compare
Psyr_2990 -0.7 -2.7 conserved hypothetical protein compare
Psyr_5102 -0.7 -2.0 ABC transporter compare
Psyr_2592 -0.7 -2.1 transport system permease protein compare
Psyr_3427 -0.7 -1.7 conserved hypothetical protein compare
Psyr_1963 -0.7 -2.6 Cyclic peptide transporter compare
Psyr_0784 -0.7 -1.9 CheW-like protein compare
Psyr_3698 -0.7 -3.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0838 -0.7 -1.5 Rieske [2Fe-2S] region compare
Psyr_1937 -0.7 -1.5 UspA compare
Psyr_0916 -0.7 -4.7 GDP-mannose 4,6-dehydratase compare
Psyr_3644 -0.7 -1.5 prephenate dehydrogenase compare
Psyr_4139 -0.7 -2.7 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_0826 -0.7 -3.3 glucose-6-phosphate isomerase compare
Psyr_3672 -0.7 -1.7 cobalamin-5'-phosphate synthase compare
Psyr_1777 -0.7 -2.9 transcriptional regulator, TetR family compare
Psyr_3202 -0.7 -0.9 NADH dehydrogenase subunit G compare
Psyr_0983 -0.7 -3.2 Protein of unknown function DUF159 compare
Psyr_1941 -0.7 -1.7 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_3429 -0.7 -1.6 CheW-like protein compare
Psyr_3841 -0.7 -1.1 conserved hypothetical protein compare
Psyr_1236 -0.7 -2.4 transcriptional regulator, BadM/Rrf2 family compare
Psyr_0385 -0.7 -1.7 phosphoribosyl-ATP pyrophosphatase compare
Psyr_4593 -0.7 -2.0 sigma factor domain protein compare
Psyr_2196 -0.7 -1.1 Urease accessory protein UreG compare
Psyr_3374 -0.7 -1.5 Heavy metal response regulator compare
Psyr_1984 -0.7 -1.4 3-isopropylmalate dehydratase, small subunit compare
Psyr_1410 -0.7 -2.2 Holliday junction DNA helicase RuvB compare
Psyr_3008 -0.7 -2.5 Undecaprenyl-diphosphatase compare
Psyr_4621 -0.7 -3.6 Heat shock protein DnaJ, N-terminal compare
Psyr_1198 -0.7 -2.0 type III secretion protein HrpF compare
Psyr_3904 -0.7 -3.8 Major intrinsic protein compare
Psyr_3120 -0.7 -1.6 D-glucarate dehydratase compare
Psyr_3905 -0.7 -3.3 glycerol kinase compare
Psyr_0060 -0.6 -2.7 Protein of unknown function DUF513 compare
Psyr_4134 -0.6 -3.5 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_1556 -0.6 -1.8 hypothetical protein compare
Psyr_2088 -0.6 -1.5 2-methylaconitate cis-trans isomerase compare
Psyr_0184 -0.6 -1.5 Protein of unknown function DUF484 compare
Psyr_0849 -0.6 -4.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2117 -0.6 -1.4 conserved hypothetical protein compare
Psyr_2141 -0.6 -1.7 hypothetical protein compare
Psyr_1595 -0.6 -2.0 Protein of unknown function DUF1232 compare
Psyr_4138 -0.6 -1.8 Toluene tolerance compare
Psyr_3015 -0.6 -3.5 cobaltochelatase CobN subunit compare
Psyr_0377 -0.6 -3.3 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_3342 -0.6 -1.0 conserved hypothetical protein compare
Psyr_4469 -0.6 -1.4 conserved hypothetical protein compare
Psyr_2151 -0.6 -0.5 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_0070 -0.6 -1.7 hypothetical protein compare
Psyr_1871 -0.6 -2.1 Transglutaminase-like protein compare
Psyr_3903 -0.6 -2.5 Conserved hypothetical protein 11 compare
Psyr_1138 -0.6 -1.0 GCN5-related N-acetyltransferase compare
Psyr_1751 -0.6 -1.8 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0982 -0.6 -1.5 conserved hypothetical protein compare
Psyr_3900 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0282 -0.6 -2.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2808 -0.6 -1.2 hypothetical protein compare
Psyr_0579 -0.6 -4.1 RNAse R compare
Psyr_1515 -0.6 -2.8 hypothetical protein compare
Psyr_0255 -0.6 -1.1 glutamate-cysteine ligase compare
Psyr_0918 -0.6 -4.6 ABC transporter compare
Psyr_4414 -0.6 -2.2 precorrin-3 methyltransferase compare
Psyr_2733 -0.6 -1.5 Short-chain dehydrogenase/reductase SDR compare
Psyr_4424 -0.6 -2.4 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_4939 -0.6 -2.0 conserved hypothetical protein compare
Psyr_0633 -0.6 -1.7 conserved hypothetical protein compare
Psyr_2305 -0.6 -1.9 Natural resistance-associated macrophage protein compare
Psyr_0914 -0.6 -3.5 Glycosyl transferase, group 1 compare
Psyr_3674 -0.6 -1.3 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_0270 -0.6 -1.8 DNA polymerase I compare
Psyr_0364 -0.6 -2.4 sodium/proton antiporter, NhaA family compare
Psyr_3958 -0.6 -3.3 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_3053 -0.6 -1.8 conserved hypothetical protein compare
Psyr_1505 -0.6 -1.1 Protein of unknown function DUF156 compare
Psyr_2829 -0.6 -1.8 conserved hypothetical protein compare
Psyr_3282 -0.6 -2.2 transcriptional regulator, TetR family compare
Psyr_0268 -0.6 -0.6 DSBA oxidoreductase compare
Psyr_2244 -0.6 -1.2 DNA topoisomerase III compare
Psyr_2256 -0.6 -1.5 ABC transporter compare
Psyr_3637 -0.6 -4.0 Glycosyl transferase, family 4 compare
Psyr_2528 -0.6 -2.4 Polysaccharide deacetylase compare
Psyr_2809 -0.6 -2.2 hypothetical protein compare
Psyr_1546 -0.6 -1.4 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen compare
Psyr_4386 -0.5 -2.0 conserved hypothetical protein compare
Psyr_4940 -0.5 -1.2 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_3796 -0.5 -1.1 transcriptional regulator, LysR family compare
Psyr_5017 -0.5 -1.6 NAD(P) transhydrogenase subunit alpha compare
Psyr_3357 -0.5 -1.2 transcriptional regulator, LysR family compare
Psyr_0219 -0.5 -3.4 phosphomannomutase compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Totarol across organisms