Experiment set9IT054 for Sinorhizobium meliloti 1021

Compare to:

L-Arabinose carbon source

200 most important genes:

  gene name fitness t score description  
SMc02572 -9.1 -6.1 imidazole glycerol phosphate synthase subunit HisH compare
SMc02899 -7.6 -7.4 prephenate dehydratase compare
SMc00614 -7.4 -5.1 phosphoribosylglycinamide formyltransferase compare
SMc00495 -7.4 -5.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01843 -7.3 -7.1 5,10-methylenetetrahydrofolate reductase compare
SMc01054 -7.2 -5.0 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc01494 -7.2 -12.9 phosphoserine phosphatase compare
SMc02766 -7.1 -17.1 tryptophan synthase subunit beta compare
SMc03981 -7.1 -4.9 phosphoglycerate kinase compare
SMc04405 -7.0 -6.9 3-isopropylmalate dehydrogenase compare
SMc03797 -6.8 -9.4 homoserine O-succinyltransferase compare
SMc00640 -6.6 -4.6 phosphoserine aminotransferase compare
SMc04002 -6.6 -10.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01028 -6.6 -11.0 phosphopyruvate hydratase compare
SMc00488 -6.4 -17.1 phosphoribosylformylglycinamidine synthase II compare
SMc03823 -6.4 -11.5 isopropylmalate isomerase large subunit compare
SMc04045 -6.4 -8.7 dihydroxy-acid dehydratase compare
SMc01431 -6.3 -9.7 acetolactate synthase 3 catalytic subunit compare
SMc04028 -6.2 -13.3 glutamate synthase compare
SMa1635 -6.2 -2.5 hypothetical protein compare
SMc02725 -6.2 -11.1 anthranilate synthase compare
SMc02767 -6.2 -8.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02717 -6.1 -11.8 2-isopropylmalate synthase compare
SMc00494 -6.1 -2.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc01726 -6.0 -7.4 acetylglutamate kinase compare
SMc02765 -5.9 -10.5 tryptophan synthase subunit alpha compare
SMc03112 -5.8 -16.4 B12-dependent methionine synthase compare
SMc02569 -5.8 -5.6 imidazole glycerol phosphate synthase subunit HisF compare
SMc02838 -5.8 -7.1 phosphoglyceromutase compare
SMc00993 -5.8 -10.4 phosphoribosylamine--glycine ligase compare
SMc00493 -5.8 -6.8 phosphoribosylformylglycinamidine synthase I compare
SMc02123 -5.7 -4.6 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02562 -5.7 -6.8 phosphoenolpyruvate carboxykinase compare
SMc00131 -5.6 -16.9 transcriptional regulator compare
SM_b20892 -5.6 -12.1 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) (from data) conserved
SMc04026 -5.6 -10.0 glutamate synthase compare
SMc00236 -5.6 -6.4 Indole-3-glycerol phosphate synthase compare
SMc00918 -5.6 -10.0 ATP phosphoribosyltransferase regulatory subunit compare
SMc02245 -5.6 -5.4 dihydroorotate dehydrogenase 2 compare
SMc04088 -5.5 -9.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00090 -5.5 -10.5 sulfate adenylyltransferase compare
SMc00235 -5.4 -10.4 anthranilate phosphoribosyltransferase compare
SM_b21176 -5.4 -5.2 phosphate uptake ABC transporter substrate-binding protein precursor compare
SM_b21174 -5.4 -6.3 phosphate uptake ABC transporter permease compare
SMc00092 -5.3 -12.7 phosphoadenosine phosphosulfate reductase compare
SMc02574 -5.2 -7.2 imidazoleglycerol-phosphate dehydratase compare
SMc00588 -5.2 -3.5 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc03979 -5.2 -3.6 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02124 -5.2 -14.5 nitrite reductase compare
SMc00615 -5.0 -10.0 phosphoribosylaminoimidazole synthetase compare
SMc02217 -4.9 -7.5 O-succinylhomoserine sulfhydrylase compare
SMc02570 -4.9 -6.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01004 -4.8 -9.1 phosphoribosyl-AMP cyclohydrolase compare
SMc00293 -4.8 -11.6 homoserine dehydrogenase compare
SMc00412 -4.7 -4.5 orotidine 5'-phosphate decarboxylase compare
SMc00711 -4.7 -4.9 cyclohexadienyl dehydrogenase compare
SMc00917 -4.6 -6.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc04001 -4.6 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01801 -4.6 -4.1 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SM_b20890 -4.6 -10.2 L-arabonate dehydratase (EC 4.2.1.25) (from data) conserved
SMc03229 -4.5 -3.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02707 -4.5 -5.9 hypothetical protein compare
SMc02165 -4.5 -5.4 orotate phosphoribosyltransferase compare
SMc00091 -4.5 -13.3 sulfate adenylyltransferase compare
SMc02137 -4.5 -4.0 ornithine carbamoyltransferase compare
SMc02138 -4.5 -5.9 acetylornithine transaminase compare
SMc00554 -4.4 -8.4 amidophosphoribosyltransferase compare
SM_b21177 -4.3 -9.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc00294 -4.3 -12.1 aminotransferase compare
SMc02166 -4.2 -10.9 dihydroorotase compare
SMc03777 -4.1 -9.1 gamma-glutamyl phosphate reductase compare
SMc02307 -4.0 -8.1 histidinol dehydrogenase compare
SMc03795 -3.9 -2.1 isopropylmalate isomerase small subunit compare
SMc00641 -3.8 -6.9 D-3-phosphoglycerate dehydrogenase compare
SMc02755 -3.8 -5.8 S-adenosyl-L-homocysteine hydrolase compare
SMc01053 -3.7 -4.9 siroheme synthase compare
SMc01770 -3.6 -1.7 serine hydroxymethyltransferase compare
SMc01360 -3.6 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc00017 -3.6 -1.9 homoserine kinase compare
SMc00876 -3.6 -2.5 ATP-binding MRP protein compare
SMc03776 -3.4 -4.1 gamma-glutamyl kinase compare
SMc03069 -3.3 -2.3 6-phosphogluconolactonase compare
SM_b20894 -3.3 -7.0 L-arabinose ABC transporter, ATPase component (from data) compare
SMc02246 -3.2 -1.3 hypothetical protein compare
SMc01206 -3.2 -1.7 queuine tRNA-ribosyltransferase compare
SM_b20895 -3.2 -10.8 sugar uptake ABC transporter substrate-binding protein precursor conserved
SMc01881 -3.1 -3.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SM_b20891 -3.0 -3.7 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) compare
SMc04346 -2.9 -3.9 ketol-acid reductoisomerase compare
SMc02055 -2.8 -2.4 phytoene synthase compare
SMc01578 -2.7 -9.7 aspartate aminotransferase compare
SM_b21175 -2.7 -5.8 phosphate uptake ABC transporter permease compare
SMc01430 -2.6 -7.5 acetolactate synthase 3 regulatory subunit compare
SMc02640 -2.5 -5.4 UDP-glucuronic acid epimerase compare
SMc01361 -2.4 -2.3 dihydroorotase compare
SMc00302 -2.4 -1.5 hypothetical protein compare
SM_b20893 -2.4 -8.6 sugar uptake ABC transporter permease conserved
SMc00914 -2.3 -3.0 oxidoreductase compare
SMc01880 -2.2 -1.5 pantoate--beta-alanine ligase compare
SMc01441 -2.1 -5.5 membrane bound protease compare
SMc03978 -2.1 -1.4 transketolase compare
SMc01220 -2.1 -5.3 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02983 -2.0 -7.6 ornithine, DAP, or arginine decarboxylase compare
SMc02975 -2.0 -9.5 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SMc00295 -1.8 -1.1 hypothetical protein compare
SMc00414 -1.8 -12.8 hypothetical protein compare
SMc00169 -1.8 -11.6 malic enzyme compare
SMc01207 -1.7 -2.2 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SM_b20452 -1.6 -3.7 hypothetical protein compare
SMc02909 -1.6 -1.8 transglycosylase transmembrane protein compare
SMa1095 -1.6 -1.2 hypothetical protein compare
SMc00580 -1.6 -2.7 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02724 -1.6 -3.4 hypothetical protein compare
SMc01852 -1.6 -9.0 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc01440 -1.6 -4.6 hydrolase serine protease transmembrane protein compare
SMc00296 -1.5 -6.6 POLY3-hydroxybutyrate polymerase compare
SMc02901 -1.5 -1.2 hypothetical protein compare
SMc04003 -1.5 -1.0 50S ribosomal protein L36 compare
SMc02142 -1.5 -2.9 phosphate transporter ATP-binding protein compare
SMc02145 -1.4 -0.7 signal peptide protein compare
SMc03100 -1.3 -1.2 hypothetical protein compare
SMa0734 -1.3 -2.1 hypothetical protein compare
SMc02683 -1.3 -2.1 hypothetical protein compare
SMc02232 -1.3 -2.3 hypothetical protein compare
SMc00166 -1.3 -1.7 oxidoreductase NAD protein compare
SM_b20953 -1.2 -1.2 hypothetical protein compare
SMc00815 -1.2 -0.8 inosine 5'-monophosphate dehydrogenase compare
SMc00619 -1.2 -1.1 hypothetical protein compare
SMc01043 -1.2 -5.8 nitrogen assimilation regulatory protein compare
SMa2289 -1.2 -1.4 hypothetical protein compare
SMc01368 -1.2 -3.7 transport transmembrane protein compare
SMc03746 -1.2 -1.7 hypothetical protein compare
SMc00067 -1.1 -3.9 outer-membranne lipoprotein compare
SMc00566 -1.1 -2.6 hypothetical protein compare
SMc03763 -1.1 -1.0 cytosine-specific methyltransferase compare
SMc00760 -1.1 -2.4 recombinase A compare
SMc04121 -1.1 -1.8 uracil phosphoribosyltransferase compare
SMa1658 -1.1 -2.4 hypothetical protein compare
SMc00883 -1.1 -6.2 L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) (from data) compare
SM_b20948 -1.1 -1.4 glucosyltransferase compare
SMc01858 -1.1 -1.3 S-adenosyl-methyltransferase MraW compare
SM_b20282 -1.1 -2.6 spermidine/putrescine ABC transporter permease compare
SMc02058 -1.1 -2.2 YAJC protein compare
SMc00761 -1.1 -6.9 oxidoreductase compare
SMa0222 -1.0 -2.0 GntR family transcriptional regulator compare
SMc01124 -1.0 -4.2 PII uridylyl-transferase compare
SM_b20210 -1.0 -2.6 oxidoreductase compare
SMc00355 -1.0 -1.7 hypothetical protein compare
SMc04348 -1.0 -0.9 transcriptional regulator compare
SMc02451 -1.0 -1.3 hypothetical protein compare
SMc02641 -1.0 -1.6 UDP-glucose 6-dehydrogenase compare
SMc03135 -1.0 -2.0 amino-acid transport system ATP-binding ABC transporter protein compare
SMc00987 -1.0 -1.6 hypothetical protein compare
SMc02407 -1.0 -4.9 hypothetical protein compare
SMc00882 -1.0 -2.0 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SM_b20307 -1.0 -1.0 dihydroxyacetone kinase compare
SMc02659 -1.0 -3.2 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMa0947 -1.0 -2.3 hypothetical protein compare
SMa0431 -1.0 -1.3 hypothetical protein compare
SMc02484 -1.0 -2.6 amino acid efflux transmembrane protein compare
SMc02435 -1.0 -1.0 methyltransferase compare
SMc00691 -1.0 -2.2 site-specific tyrosine recombinase XerD compare
SMc04000 -1.0 -0.7 hypothetical protein compare
SMc00492 -1.0 -0.6 hypothetical protein compare
SMc02102 -0.9 -2.0 hypothetical protein compare
SMc03801 -0.9 -1.8 thioredoxin protein compare
SMc00982 -0.9 -3.8 dioxygenase compare
SMc03030 -0.9 -3.0 flagellar basal body rod protein FlgG compare
SMa0144 -0.9 -0.7 hypothetical protein compare
SMc00830 -0.9 -4.6 hypothetical protein conserved
SMc02544 -0.9 -0.9 hypothetical protein compare
SMc02234 -0.9 -1.0 hypothetical protein compare
SMc03279 -0.9 -1.8 transposase number 2 for insertion sequence ISRM28 compare
SMc02978 -0.9 -2.5 hypothetical protein compare
SM_b21400 -0.8 -2.4 hypothetical protein compare
SMc00010 -0.8 -1.0 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc01041 -0.8 -2.5 NIFR3-like protein compare
SMc03996 -0.8 -2.2 thiamine-phosphate pyrophosphorylase compare
SMc02050 -0.8 -2.3 trigger factor compare
SMc01147 -0.8 -0.8 coproporphyrinogen III oxidase compare
SMc01800 -0.8 -0.5 cytochrome C oxidase assembly transmembrane protein compare
SMc01042 -0.8 -3.0 nitrogen regulation protein compare
SMa0674 -0.8 -1.2 hypothetical protein compare
SMc02366 -0.8 -6.0 transcriptional regulator compare
SM_b20293 -0.8 -1.0 hypothetical protein compare
SMa5010 -0.8 -0.8 hypothetical protein compare
SMc00821 -0.8 -1.0 hypothetical protein compare
SMc02141 -0.8 -1.4 phosphate transporter PhoU compare
SMa1924 -0.8 -0.6 hypothetical protein compare
SMc02260 -0.8 -1.3 ABC transporter ATP-binding protein compare
SMa1201 -0.8 -2.0 hypothetical protein compare
SMc04042 -0.8 -2.9 monophosphatase compare
SMc02362 -0.8 -0.8 cytochrome c-type biogenesis protein CcmE compare
SMc02894 -0.7 -1.5 hypothetical protein compare
SMc03980 -0.7 -2.3 hypothetical protein compare
SMc03826 -0.7 -0.5 argininosuccinate synthase compare
SMc02812 -0.7 -1.5 hypothetical protein compare
SMc00881 -0.7 -2.6 2-dehydro-3-deoxygalactonokinase compare
SMc02450 -0.7 -1.6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
SMc01553 -0.7 -2.0 acyl carrier protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source L-Arabinose in Sinorhizobium meliloti 1021

For carbon source L-Arabinose across organisms