Experiment set9IT054 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Pyruvate (fermenting) with Na2S as sulfur source

200 most detrimental genes:

  gene name fitness t score description  
DVU1631 +2.2 12.6 conserved hypothetical protein (TIGR) compare
DVU2747 +1.7 13.9 hypothetical protein (TIGR) compare
DVU2867 +1.4 2.4 holin (TIGR) compare
DVU0509 +1.3 1.8 conserved hypothetical protein (TIGR) compare
DVU0802 +1.0 0.9 hypothetical protein (TIGR) compare
DVU2454 +1.0 0.9 hypothetical protein (TIGR) compare
DVU1210 +1.0 0.7 conserved hypothetical protein (TIGR) compare
DVU0436 +1.0 1.4 transcriptional regulator, TetR family (TIGR) compare
DVU2203 +0.9 3.1 endoribonuclease, L-PSP family (TIGR) compare
DVU2045 +0.9 4.6 hypothetical protein (TIGR) compare
DVU0043 fliQ +0.9 6.4 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0513 flgG +0.8 7.0 flagellar basal-body rod protein FlgG (TIGR) compare
DVU2894 flrA +0.8 6.1 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU2863 +0.8 1.1 hypothetical protein (TIGR) compare
DVU0703 lepA +0.8 1.5 GTP-binding protein LepA (TIGR) compare
DVU1862 +0.8 3.1 GGDEF domain protein (TIGR) compare
DVU0315 flgC +0.8 6.5 flagellar basal-body rod protein FlgC (TIGR) compare
DVU0310 fliI +0.8 5.9 flagellum-specific ATP synthase FliI (TIGR) compare
DVU1934 phnE +0.7 4.9 phosphonate ABC transporter, permease protein (TIGR) compare
DVU0044 fliP +0.7 3.6 flagellar biosynthetic protein fliP (TIGR) compare
DVU2510 +0.7 0.5 penicillin-binding protein (TIGR) compare
DVU1444 flgD +0.7 3.9 basal-body rod modification protein FlgD (TIGR) compare
DVU1936 phnC +0.7 2.6 phosphonate ABC transporter, ATP-binding protein (TIGR) compare
DORF38058 +0.7 1.1 SEED: FIG00604017: hypothetical protein compare
DVU0316 flgB +0.7 3.2 flagellar basal-body rod protein FlgB (TIGR) compare
DVU0512 flgF +0.7 4.2 flagellar basal-body rod protein, putative (TIGR) compare
DVU0047 +0.7 3.7 flagellar protein FliL (TIGR) compare
DVU1251 +0.7 1.0 hypothetical protein (TIGR) compare
DVU0693 narH +0.7 3.0 molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative (TIGR), containing cytochrome c heme-binding site (VIMSS_AUTO) compare
DVU1629 yfiA +0.7 4.2 ribosomal subunit interface protein (TIGR) compare
DORF4170 +0.6 1.3 no description compare
DVU0311 +0.6 4.4 flagellar assembly protein FliH, putative (TIGR) compare
DVU1078 +0.6 4.4 R3H domain protein (TIGR) compare
DVU1863 +0.6 2.6 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU3314 +0.6 2.0 peptidase, U32 family (TIGR) compare
DVU0339 serA +0.6 3.6 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU0898 +0.6 3.3 conserved hypothetical protein (TIGR) compare
DVU0314 fliE +0.6 3.8 flagellar basal body component FliE (TIGR) compare
DVU0514 +0.6 3.5 FlgA family protein (TIGR) compare
DVU2341 +0.6 2.5 amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU2391 +0.6 0.6 hypothetical protein (TIGR) compare
DVU1937 +0.6 3.5 phosphonate ABC transporter, periplasmic phosphonate-binding protein, putative (TIGR) compare
DVU3348 +0.6 0.8 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit, putative (TIGR) compare
DVU3274 +0.6 1.2 hypothetical protein (TIGR) compare
DVU0312 fliG +0.6 3.7 flagellar motor switch protein FliG (TIGR) compare
DVU1935 phnE +0.6 2.5 phosphonate ABC transporter, permease protein (TIGR) compare
DVU2300 +0.6 0.8 hypothetical protein (TIGR) compare
DVU_tRNA-Ala-5 tRNA-Ala +0.6 0.5 tRNA with anticodon CGC for Ala (VIMSS-AUTO) compare
DVU2947 +0.6 2.5 anaerobic ribonucleoside-triphosphate reductase, putative (TIGR) compare
DVU2578 +0.6 3.5 response regulator (TIGR) compare
DVU2115 +0.6 1.2 hypothetical protein (TIGR) compare
DVU2609 +0.6 3.9 chemotaxis MotB protein, putative (TIGR) compare
DVU0313 fliF +0.6 4.0 flagellar M-ring protein FliF (TIGR) compare
DVUA0146 +0.6 2.7 hypothetical protein (TIGR) compare
DVU1859 +0.5 1.2 hypothetical protein (TIGR) compare
DVU0223 +0.5 1.0 conserved hypothetical protein (TIGR) compare
DVU0793 +0.5 1.5 hypothetical protein (TIGR) compare
DVU0516 flgI +0.5 3.3 flagellar P-ring protein FlgI (TIGR) compare
DVU0880 +0.5 1.6 hypothetical protein (TIGR) compare
DVU0515 flgH +0.5 2.9 flagellar L-ring protein FlgH (TIGR) compare
DVU3260 +0.5 2.3 hypothetical protein (TIGR) compare
DORF9585 +0.5 0.8 no description compare
DVU0912 +0.5 2.0 conserved domain protein (TIGR) compare
DVU0045 +0.5 3.1 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU1460 +0.5 1.1 hypothetical protein (TIGR) compare
DVU1621 +0.5 1.5 hypothetical protein (TIGR) compare
DVU0046 fliN +0.5 3.5 flagellar motor switch protein FliN (TIGR) compare
DVU1242 vacJhomolog +0.5 0.7 vacJ lipoprotein, putative (TIGR) compare
DVU3177 +0.5 3.7 hypothetical protein (TIGR) compare
DORF12455 +0.5 0.8 SEED: helix-turn-helix protein, CopG family compare
DVU1280 +0.5 2.4 conserved hypothetical protein TIGR00159 (TIGR) compare
DVU3233 flhB +0.5 3.6 flagellar biosynthetic protein FlhB (TIGR) compare
DVU3329 +0.5 1.8 hypothetical protein (TIGR) compare
DVU1842 +0.5 1.0 lipoprotein, putative (TIGR) compare
DVU2847 +0.5 2.3 hypothetical protein (TIGR) compare
DVU2766 +0.5 2.3 hypothetical protein (TIGR) compare
DVU2112 +0.5 3.0 hypothetical protein (TIGR) compare
DVU2343 glnQ +0.5 3.3 amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU0858 +0.5 2.6 lipoprotein, putative (TIGR) compare
DVU0014 infA-1 +0.5 1.1 translation initiation factor IF-1 (TIGR) compare
DVU0698 rfbC +0.5 3.5 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU0522 yviF +0.5 1.9 conserved hypothetical protein (TIGR) compare
DVU0603 +0.5 1.0 hypothetical protein (TIGR) compare
DVU1449 +0.5 2.8 anti-anti-sigma factor, putative (TIGR) compare
DVU0519 +0.5 4.1 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU1690 +0.5 1.2 transcriptional regulator, TetR family (TIGR) compare
DORF8571 +0.5 1.0 SEED: FIG00603598: hypothetical protein compare
DVU0989 +0.5 1.9 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU1996 +0.5 1.1 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare
DVU1704 +0.5 0.6 conserved hypothetical protein (TIGR) compare
DVU0669 +0.5 1.4 hypothetical protein (TIGR) compare
DVU0382 +0.5 1.1 hypothetical protein (TIGR) compare
DVU2591 +0.5 1.9 tail fiber assembly protein, putative (TIGR) compare
DORF6830 +0.5 2.3 SEED: FIG00602532: hypothetical protein compare
DVU2284 +0.4 2.6 hypothetical protein (TIGR) compare
DVU1337 lon +0.4 3.5 ATP-dependent protease La (TIGR) compare
DVU0694 +0.4 3.0 molybdopterin oxidoreductase, molybdopterin-binding subunit, putative (TIGR) compare
DVU1816 +0.4 2.1 conserved hypothetical protein (TIGR) compare
DVU2896 +0.4 3.6 TPR domain protein (TIGR) compare
DVU1387 +0.4 1.7 conserved hypothetical protein (TIGR) compare
DVU1441 flaB1 +0.4 2.5 flagellin (TIGR) compare
DVU1443 flgE +0.4 2.2 flagellar hook protein FlgE (TIGR) compare
DVU2577 +0.4 2.5 DNA-binding response regulator, LuxR family (TIGR) compare
DVU1894 +0.4 1.1 hypothetical protein (TIGR) compare
DVU1589 +0.4 2.4 hypothetical protein (TIGR) compare
DORF10632 +0.4 2.3 SEED: FIG00602944: hypothetical protein compare
DVU0428 +0.4 1.9 conserved hypothetical protein (TIGR) compare
DVU2846 +0.4 1.2 hypothetical protein (TIGR) compare
DVU3085 +0.4 1.4 hypothetical protein (TIGR) compare
DVU1075 rnpA +0.4 0.2 ribonuclease P protein component (TIGR) compare
DVU2566 lysA-2 +0.4 1.6 diaminopimelate decarboxylase (TIGR) compare
DVU2269 +0.4 1.1 hypothetical protein (TIGR) compare
DVU2325 merP +0.4 0.7 mercuric transport protein periplasmic component (TIGR) compare
DVU0307 +0.4 2.8 flagella basal body rod domain protein (TIGR) compare
DVU0859 +0.4 3.3 hypothetical protein (TIGR) compare
DVU3289 +0.4 1.0 hypothetical protein (TIGR) compare
DVU2946 +0.4 2.0 hypothetical protein (TIGR) compare
DORF17147 +0.4 1.6 SEED: TPR domain protein compare
DVU2873 +0.4 0.5 hypothetical protein (TIGR) compare
DVU1844 +0.4 0.3 septum formation initiator family protein (TIGR) compare
DVU0747 cysA +0.4 1.2 ABC transporter, ATP-binding protein (TIGR) compare
DVU0410 +0.4 2.0 hypothetical protein (TIGR) compare
DVU0146 +0.4 2.2 hypothetical protein (TIGR) compare
DVU2210 +0.4 2.7 TPR domain protein (TIGR) compare
DVU0034 +0.4 2.2 DSBA-like thioredoxin domain protein (TIGR) compare
DVU1045 +0.4 2.2 hypothetical protein (TIGR) compare
DVU2659 +0.4 1.0 exsB protein (TIGR) compare
DVU1567 +0.4 1.9 hypothetical protein (TIGR) compare
DVU1445 +0.4 2.6 flagellar hook-length control domain protein (TIGR) compare
DVU2021 +0.4 1.5 hypothetical protein (TIGR) compare
DVU3387 +0.4 2.4 hypothetical protein (TIGR) compare
DVU2582 +0.4 1.2 transcriptional regulator, TetR family (TIGR) compare
DVU0432 +0.4 1.2 Ech hydrogenase, subunit EchC, putative (TIGR) compare
DVU1630 ptsN +0.4 0.6 PTS system, IIA component (TIGR) compare
DVU2658 +0.4 1.0 conserved hypothetical protein (TIGR) compare
DVU0376 +0.4 0.9 hypothetical protein (TIGR) compare
DVU2774 +0.4 1.8 CBS domain protein/ACT domain protein (TIGR) compare
DVU2340 +0.4 1.4 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU0595 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DVU1777 cynT +0.4 0.5 carbonic anhydrase (TIGR) compare
DVU1363 rfbD +0.4 1.5 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU0913 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DVU3227 +0.4 1.8 flagellar basal body-associated protein, putative (TIGR) compare
DVU2624 +0.4 1.1 hypothetical protein (TIGR) compare
DVU2060 +0.4 1.0 hypothetical protein (TIGR) compare
DVU2362 thiE-2 +0.4 0.9 thiamine-phosphate pyrophosphorylase (TIGR) compare
DVU1349 SelGGPS +0.4 0.7 geranylgeranyl diphosphate synthase (TIGR) compare
DVU1093 +0.4 0.8 HAD-superfamily hydrolase, subfamily IA, variant 3 (TIGR) compare
DVU3251 +0.4 1.7 nitrite transporter, HPP family (from data) compare
DVU3028 +0.4 1.9 iron-sulfur cluster-binding protein (TIGR) compare
DVU1828 gidA +0.4 1.1 glucose inhibited division protein A (TIGR) compare
DVU2657 +0.3 0.8 6-pyruvoyl tetrahydrobiopterin synthase, putative (TIGR) compare
DVU0518 +0.3 1.8 hypothetical protein (TIGR) compare
DORF28911 +0.3 1.8 SEED: FIG00602256: hypothetical protein compare
DVU3393 +0.3 0.6 hypothetical protein (TIGR) compare
DVU0692 +0.3 1.7 molybdopterin oxidoreductase, transmembrane subunit, putative (TIGR) compare
DVU1464 +0.3 2.8 heptosyltransferase family protein (TIGR) compare
DVU0863 +0.3 2.7 flagellar hook-associated protein 2, putative (TIGR) compare
DVU2859 +0.3 1.4 tail sheath protein, putative (TIGR) compare
DVU2105 +0.3 2.1 hypothetical protein (TIGR) compare
DVU1192 acyP +0.3 1.0 acylphosphatase (TIGR) compare
DVU1069 +0.3 1.8 branched chain amino acid ABC transporter, permease protein (TIGR) compare
DVUA0006 mgtE +0.3 1.5 magnesium transporter MgtE, putative (TIGR) compare
DVU0216 +0.3 1.9 phage baseplate assembly protein V, putative (TIGR) compare
DVU2695 +0.3 1.4 conserved hypothetical protein (TIGR) compare
DVU2250 +0.3 1.5 AMP-binding protein (TIGR) compare
DVU1063 flrC +0.3 2.2 transcriptional regulatory protein (TIGR) compare
DVU2677 +0.3 2.4 sensor histidine kinase/response regulator (TIGR) compare
DVU1264 +0.3 1.7 transglycosylase SLT domain protein (TIGR) compare
DVU2606 +0.3 0.8 hypothetical protein (TIGR) compare
DVU1962 +0.3 2.6 methyl-accepting chemotaxis protein (TIGR) compare
DVU2550 +0.3 0.6 hypothetical protein (TIGR) compare
DVU3067 hypF +0.3 0.6 [NiFe] hydrogenase maturation protein HypF (TIGR) compare
DVU3232 flhA +0.3 2.6 flagellar biosynthetic protein FlhA (TIGR) compare
DVU2592 +0.3 1.3 hypothetical protein (TIGR) compare
DVU2583 +0.3 2.0 lipoprotein, putative (TIGR) compare
DVU0970 +0.3 1.2 lipoprotein, putative (TIGR) compare
DVU0740 +0.3 1.8 membrane protein, putative (TIGR) compare
DVU1222 +0.3 1.7 hypothetical protein (TIGR) compare
DVU2634 +0.3 1.0 hypothetical protein (TIGR) compare
DVU3063 mviN-2 +0.3 1.8 integral membrane protein MviN (TIGR) compare
DVU2811 +0.3 2.0 formate dehydrogenase, beta subunit, putative (TIGR) compare
DVU3051 mutT +0.3 1.4 mutator mutT protein (TIGR) compare
DVU3056 +0.3 1.9 conserved hypothetical protein (TIGR) compare
DVU0829 ptsI +0.3 2.0 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DVU0295 +0.3 2.6 amine oxidase, flavin-containing (TIGR) compare
DVU1940 glpA +0.3 2.0 anaerobic glycerol-3-phosphate dehydrogenase, A subunit, putative (TIGR) compare
DVU2608 motA-3 +0.3 2.0 chemotaxis protein MotA (TIGR) compare
DVU3133 glpF +0.3 0.8 glycerol uptake facilitator protein (TIGR) compare
DVU1710 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU3360 parB +0.3 1.9 ParB family protein (TIGR) compare
DVU3049 +0.3 1.4 hemerythrin family protein (TIGR) compare
DVU1669 rluB +0.3 1.3 ribosomal large subunit pseudouridine synthase B (TIGR) compare
DVU3234 +0.3 1.1 flagellar biosynthetic protein FliR (TIGR) compare
DVU1727 +0.3 0.6 hypothetical protein (TIGR) compare
DVU0077 +0.3 1.7 conserved hypothetical protein (TIGR) compare
DVU0963 +0.3 1.0 GTP cyclohydrolase I family protein (TIGR) compare
DVU0910 fliM +0.3 1.9 flagellar motor switch protein FliM (TIGR) compare
DVU1465 +0.3 2.2 CgeB family protein (TIGR) compare
DVU1085 phoU +0.3 1.7 phosphate transport system protein PhoU (TIGR) compare


Specific Phenotypes

For 1 genes in this experiment

For fermentative growth Sodium pyruvate in Desulfovibrio vulgaris Hildenborough JW710

For fermentative growth Sodium pyruvate across organisms