Experiment set9IT054 for Bacteroides thetaiotaomicron VPI-5482
BHIS with Sulfamonomethoxine 0.2 mM
Group: stressMedia: BHIS + Sulfamonomethoxine (0.2 mM) + Dimethyl Sulfoxide (2 vol%)
Culturing: Btheta_ML6a, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Hans on 6/18/18
Media components: 7.7 g/L Calf brains, 9.8 g/L Beef heart, 10 g/L Proteose Peptone, 5 g/L Sodium Chloride, 2.5 g/L Disodium phosphate, 1 g/L L-Cysteine, 2 g/L Sodium bicarbonate, 0.005 g/L Hemin
Specific Phenotypes
For 6 genes in this experiment
For stress Sulfamonomethoxine in Bacteroides thetaiotaomicron VPI-5482
For stress Sulfamonomethoxine across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| D-Galacturonate and D-Glucuronate Utilization | 1 |
| Maltose and Maltodextrin Utilization | 1 |
| Methionine Biosynthesis | 1 |
| Methionine Degradation | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Galactose metabolism
- Methionine metabolism
- Selenoamino acid metabolism
- Starch and sucrose metabolism
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| S-adenosyl-L-methionine salvage II | 3 | 2 | 1 |
| L-methionine degradation I (to L-homocysteine) | 3 | 2 | 1 |
| starch degradation I | 3 | 1 | 1 |
| superpathway of L-cysteine biosynthesis (mammalian) | 5 | 2 | 1 |
| glycogen degradation I | 8 | 7 | 1 |
| superpathway of L-methionine salvage and degradation | 16 | 8 | 1 |