Experiment set9IT053 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Avocadyne 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4340 -3.4 -12.2 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -3.3 -6.3 SirA-like protein compare
Psyr_4740 -3.1 -9.2 thiazole-phosphate synthase compare
Psyr_1613 -3.1 -8.5 septum site-determining protein MinC compare
Psyr_0033 -2.9 -2.8 tryptophan synthase, alpha chain compare
Psyr_1373 -2.8 -5.3 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0034 -2.6 -5.2 tryptophan synthase, beta chain compare
Psyr_4341 -2.6 -8.3 thiamine-phosphate diphosphorylase compare
Psyr_4991 -2.6 -3.0 hypothetical protein compare
Psyr_0255 -2.6 -3.4 glutamate-cysteine ligase compare
Psyr_4091 -2.5 -5.1 8-oxo-dGTPase compare
Psyr_3419 -2.4 -5.7 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_2594 -2.2 -2.1 unknown conserved protein in bacilli compare
Psyr_0951 -2.2 -3.4 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0529 -2.2 -6.0 Glycosyl transferase, group 1 compare
Psyr_4519 -2.2 -8.0 General substrate transporter:Major facilitator superfamily compare
Psyr_4203 -2.1 -2.7 SsrA-binding protein compare
Psyr_0475 -2.1 -4.3 Protein of unknown function YGGT compare
Psyr_3906 -2.1 -3.1 regulatory protein, DeoR compare
Psyr_2980 -2.0 -3.4 UDP-glucose pyrophosphorylase compare
Psyr_4418 -2.0 -1.6 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_0571 -2.0 -5.2 tRNA isopentenyltransferase compare
Psyr_5132 -2.0 -3.9 Glucose-inhibited division protein A subfamily compare
Psyr_0487 -1.9 -3.3 glutathione synthase compare
Psyr_3193 -1.9 -2.8 Transcription factor jumonji, jmjC compare
Psyr_4580 -1.8 -2.9 anthranilate phosphoribosyltransferase compare
Psyr_0532 -1.8 -6.1 conserved hypothetical protein compare
Psyr_4194 -1.7 -4.6 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_2593 -1.7 -3.2 ABC transporter compare
Psyr_4627 -1.7 -3.5 dimethyladenosine transferase compare
Psyr_4362 -1.7 -2.5 Rare lipoprotein A compare
Psyr_1371 -1.7 -7.2 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0835 -1.6 -6.0 transcriptional regulator, TraR/DksA family compare
Psyr_2591 -1.6 -6.7 transport system permease protein compare
Psyr_2582 -1.6 -7.9 TonB-dependent siderophore receptor compare
Psyr_3120 -1.6 -2.4 D-glucarate dehydratase compare
Psyr_0574 -1.6 -5.9 protease FtsH subunit HflK compare
Psyr_3886 -1.6 -2.0 methionyl-tRNA synthetase compare
Psyr_4687 -1.6 -7.5 biotin synthase compare
Psyr_0531 -1.6 -1.8 LmbE-like protein compare
Psyr_3199 -1.5 -2.8 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2071 -1.5 -2.6 outer membrane lipoprotein OprI compare
Psyr_4754 -1.5 -1.6 16S rRNA m(2)G-966 methyltransferase compare
Psyr_2592 -1.5 -4.2 transport system permease protein compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_4684 -1.5 -3.7 biotin synthesis protein BioC compare
Psyr_0838 -1.5 -2.5 Rieske [2Fe-2S] region compare
Psyr_2897 -1.4 -5.4 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1268 -1.4 -5.7 extracellular solute-binding protein, family 3:SLT compare
Psyr_1588 -1.4 -2.8 Putative exonuclease, RdgC compare
Psyr_4512 -1.4 -5.2 putative phage-related protein compare
Psyr_3698 -1.4 -4.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_4151 -1.3 -1.5 Phosphocarrier HPr protein compare
Psyr_4460 -1.3 -1.7 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_2808 -1.3 -2.4 hypothetical protein compare
Psyr_4581 -1.3 -2.6 anthranilate synthase, component II compare
Psyr_4686 -1.3 -5.7 8-amino-7-oxononanoate synthase compare
Psyr_4566 -1.3 -6.6 Peptidase M23B compare
Psyr_2590 -1.3 -1.8 Periplasmic binding protein compare
Psyr_5067 -1.3 -4.3 conserved hypothetical protein compare
Psyr_1419 -1.3 -3.4 preQ(0) biosynthesis protein QueC compare
Psyr_0464 -1.2 -2.0 hypothetical protein compare
Psyr_2872 -1.2 -2.7 hypothetical protein compare
Psyr_1410 -1.2 -3.2 Holliday junction DNA helicase RuvB compare
Psyr_3581 -1.2 -4.6 ribosomal large subunit pseudouridine synthase B compare
Psyr_4683 -1.2 -4.3 dethiobiotin synthase compare
Psyr_4386 -1.2 -3.6 conserved hypothetical protein compare
Psyr_1408 -1.2 -2.7 Holliday junction endonuclease RuvC compare
Psyr_3358 -1.2 -2.6 transmembrane pair compare
Psyr_4582 -1.2 -1.3 hypothetical protein compare
Psyr_2855 -1.2 -3.7 methionine synthase (B12-independent) compare
Psyr_2562 -1.2 -2.1 hypothetical protein compare
Psyr_0372 -1.2 -2.6 CDS compare
Psyr_1751 -1.1 -3.7 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4231 -1.1 -6.8 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_0383 -1.1 -0.9 Twin-arginine translocation protein TatB compare
Psyr_1885 -1.1 -1.4 hypothetical protein compare
Psyr_3179 -1.1 -2.6 DNA translocase FtsK compare
Psyr_1910 -1.1 -3.3 VacJ-like lipoprotein compare
Psyr_0826 -1.1 -4.8 glucose-6-phosphate isomerase compare
Psyr_0436 -1.0 -1.6 Phosphopantetheine-binding protein compare
Psyr_3290 -1.0 -3.1 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3904 -1.0 -5.2 Major intrinsic protein compare
Psyr_0917 -1.0 -6.1 ABC-2 compare
Psyr_0724 -1.0 -2.3 conserved hypothetical protein compare
Psyr_1111 -1.0 -1.3 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0070 -1.0 -1.9 hypothetical protein compare
Psyr_3427 -1.0 -1.9 conserved hypothetical protein compare
Psyr_4230 -1.0 -4.6 Helix-turn-helix, Fis-type compare
Psyr_0215 -1.0 -6.0 Exodeoxyribonuclease III xth compare
Psyr_0454 -1.0 -3.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0385 -1.0 -2.5 phosphoribosyl-ATP pyrophosphatase compare
Psyr_0831 -1.0 -2.2 Two-component response regulator CbrB compare
Psyr_1251 -1.0 -2.5 quinoprotein compare
Psyr_2107 -1.0 -2.3 Ribosome modulation factor compare
Psyr_1236 -1.0 -2.2 transcriptional regulator, BadM/Rrf2 family compare
Psyr_2211 -1.0 -1.9 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_2312 -1.0 -1.2 Protein of unknown function DUF24 compare
Psyr_1949 -1.0 -2.7 ABC-3 compare
Psyr_0849 -1.0 -5.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3933 -1.0 -2.1 conserved hypothetical protein compare
Psyr_3755 -1.0 -1.3 conserved hypothetical protein compare
Psyr_1663 -1.0 -2.8 phosphoribosylanthranilate isomerase compare
Psyr_4138 -1.0 -2.3 Toluene tolerance compare
Psyr_0918 -1.0 -7.0 ABC transporter compare
Psyr_3202 -1.0 -1.4 NADH dehydrogenase subunit G compare
Psyr_0281 -1.0 -2.5 ABC transporter compare
Psyr_0982 -1.0 -2.6 conserved hypothetical protein compare
Psyr_0535 -1.0 -1.9 toluene tolerance protein, putative compare
Psyr_2080 -0.9 -2.9 aminodeoxychorismate synthase, subunit I compare
Psyr_2344 -0.9 -2.4 CDS compare
Psyr_3198 -0.9 -1.4 NADH dehydrogenase subunit B compare
Psyr_0885 -0.9 -1.3 conserved hypothetical protein compare
Psyr_1357 -0.9 -3.5 RNase HII compare
Psyr_2266 -0.9 -1.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4282 -0.9 -4.8 cytochrome bd quinol oxidase subunit 1 apoprotein compare
Psyr_3289 -0.9 -2.0 3-ketoacyl-CoA thiolase compare
Psyr_1864 -0.9 -2.4 spermidine synthase compare
Psyr_4100 -0.9 -3.3 D-alanine--D-alanine ligase compare
Psyr_1765 -0.9 -2.9 GCN5-related N-acetyltransferase compare
Psyr_1418 -0.9 -1.6 Radical SAM compare
Psyr_3954 -0.9 -2.9 GTP-binding protein LepA compare
Psyr_1747 -0.9 -2.1 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1372 -0.9 -2.5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_4015 -0.9 -1.9 conserved domain protein compare
Psyr_3842 -0.9 -3.2 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_2514 -0.8 -2.5 ABC transporter compare
Psyr_1816 -0.8 -2.2 transcriptional regulator, GntR family compare
Psyr_0393 -0.8 -2.3 Protein of unknown function DUF971 compare
Psyr_0304 -0.8 -2.7 ChaC-like protein compare
Psyr_2973 -0.8 -1.6 Glyoxalase I compare
Psyr_1930 -0.8 -2.6 hypothetical protein compare
Psyr_3992 -0.8 -2.0 Protein of unknown function DUF477 compare
Psyr_5133 -0.8 -2.5 tRNA modification GTPase trmE compare
Psyr_2092 -0.8 -2.3 Protein of unknown function 1935 compare
Psyr_3208 -0.8 -1.2 NADH dehydrogenase subunit M compare
Psyr_2854 -0.8 -3.8 conserved hypothetical protein compare
Psyr_1104 -0.8 -2.0 Heme oxygenase compare
Psyr_4115 -0.8 -1.8 phosphoheptose isomerase compare
Psyr_1378 -0.8 -1.6 RecA protein compare
Psyr_3692 -0.8 -1.5 conserved hypothetical protein compare
Psyr_2636 -0.8 -3.1 TspO/MBR-related protein compare
Psyr_4351 -0.8 -1.9 conserved domain protein compare
Psyr_2788 -0.8 -1.6 hypothetical protein compare
Psyr_0936 -0.8 -5.3 Glycosyl transferase, group 1 compare
Psyr_1984 -0.8 -1.3 3-isopropylmalate dehydratase, small subunit compare
Psyr_2305 -0.8 -3.1 Natural resistance-associated macrophage protein compare
Psyr_2180 -0.8 -3.0 transcriptional regulator, LysR family compare
Psyr_1670 -0.8 -1.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_1614 -0.8 -0.9 lipid A biosynthesis acyltransferase compare
Psyr_4408 -0.8 -3.6 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4420 -0.8 -2.3 precorrin-6A reductase compare
Psyr_1162 -0.8 -2.0 conserved hypothetical protein compare
Psyr_2143 -0.8 -1.6 delta1-piperideine 2-carboxylate reductase compare
Psyr_3473 -0.8 -1.2 Flagellar P-ring protein compare
Psyr_3008 -0.8 -3.2 Undecaprenyl-diphosphatase compare
Psyr_0579 -0.8 -4.9 RNAse R compare
Psyr_2087 -0.8 -2.9 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) compare
Psyr_1404 -0.7 -4.0 Ferritin and Dps compare
Psyr_0498 -0.7 -2.7 Protein of unknown function DUF1445 compare
Psyr_2285 -0.7 -1.1 Twin-arginine translocation pathway signal compare
Psyr_0347 -0.7 -2.4 hypothetical protein compare
Psyr_4822 -0.7 -1.6 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1952 -0.7 -1.3 hypothetical protein compare
Psyr_3796 -0.7 -2.0 transcriptional regulator, LysR family compare
Psyr_3947 -0.7 -1.2 Methyltransferase, putative compare
Psyr_0817 -0.7 -2.1 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_RNA28 -0.7 -0.7 tRNA-Val compare
Psyr_3695 -0.7 -4.4 RelA/SpoT protein compare
Psyr_4622 -0.7 -2.7 Nucleotidyl transferase compare
Psyr_0916 -0.7 -4.2 GDP-mannose 4,6-dehydratase compare
Psyr_4136 -0.7 -1.2 BolA-like protein compare
Psyr_5065 -0.7 -3.7 ATP-dependent DNA helicase UvrD compare
Psyr_3691 -0.7 -3.7 conserved hypothetical protein compare
Psyr_0263 -0.7 -2.7 Two-component response regulator AlgB compare
Psyr_0176 -0.7 -1.2 conserved hypothetical protein compare
Psyr_1227 -0.7 -1.6 Queuosine biosynthesis protein compare
Psyr_2833 -0.7 -1.7 CDS compare
Psyr_3889 -0.7 -1.1 conserved hypothetical protein compare
Psyr_1540 -0.7 -1.7 hypothetical protein compare
Psyr_2767 -0.7 -1.4 Glycoside hydrolase, family 19 compare
Psyr_0603 -0.7 -3.4 N-acylglucosamine 2-epimerase compare
Psyr_1688 -0.7 -0.9 Protein of unknown function DUF1315 compare
Psyr_0402 -0.7 -5.6 Peptidoglycan glycosyltransferase compare
Psyr_3007 -0.7 -1.5 Protein of unknown function DUF1294 compare
Psyr_4955 -0.7 -1.8 Protein of unknown function DUF1316 compare
Psyr_0051 -0.7 -2.2 conserved hypothetical protein compare
Psyr_0549 -0.7 -0.9 Metallophosphoesterase compare
Psyr_2278 -0.7 -2.7 luciferase compare
Psyr_0303 -0.7 -1.2 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_0041 -0.7 -1.0 Protein of unknown function DUF1161 compare
Psyr_2183 -0.7 -1.6 transcriptional regulator, GntR family compare
Psyr_4158 -0.7 -3.7 conserved hypothetical protein compare
Psyr_0623 -0.7 -1.0 Peptidase S24, S26A and S26B compare
Psyr_0444 -0.7 -0.8 Malonate decarboxylase delta subunit compare
Psyr_4335 -0.7 -1.7 transcriptional regulator, AsnC family compare
Psyr_2311 -0.7 -2.2 conserved hypothetical protein compare
Psyr_3258 -0.7 -1.8 conserved hypothetical protein compare
Psyr_1556 -0.7 -1.3 hypothetical protein compare
Psyr_4887 -0.7 -3.9 Peptidase S41A, C-terminal protease compare


Specific Phenotypes

For 1 genes in this experiment

For stress Avocadyne in Pseudomonas syringae pv. syringae B728a

For stress Avocadyne across organisms