Experiment set9IT053 for Sinorhizobium meliloti 1021

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
SMc02572 -9.0 -6.2 imidazole glycerol phosphate synthase subunit HisH compare
SMc02123 -8.2 -3.4 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02766 -8.0 -12.3 tryptophan synthase subunit beta compare
SMc00236 -7.9 -5.5 Indole-3-glycerol phosphate synthase compare
SMc02899 -7.3 -7.1 prephenate dehydratase compare
SMc00614 -7.3 -5.0 phosphoribosylglycinamide formyltransferase compare
SMc04405 -7.2 -4.9 3-isopropylmalate dehydrogenase compare
SMc01494 -7.1 -12.8 phosphoserine phosphatase compare
SMc01054 -7.0 -4.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SM_b21175 -6.9 -4.8 phosphate uptake ABC transporter permease compare
SMc00917 -6.9 -4.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02569 -6.8 -4.7 imidazole glycerol phosphate synthase subunit HisF compare
SMc01843 -6.8 -10.3 5,10-methylenetetrahydrofolate reductase compare
SMc01726 -6.6 -6.4 acetylglutamate kinase compare
SMc02717 -6.5 -8.9 2-isopropylmalate synthase compare
SMc00640 -6.4 -4.5 phosphoserine aminotransferase compare
SMc04002 -6.4 -9.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00993 -6.3 -8.6 phosphoribosylamine--glycine ligase compare
SMa1635 -6.2 -2.5 hypothetical protein compare
SMc02765 -6.2 -13.6 tryptophan synthase subunit alpha compare
SMc03112 -6.1 -14.7 B12-dependent methionine synthase compare
SMc00131 -6.1 -15.2 transcriptional regulator compare
SMc02217 -6.0 -4.2 O-succinylhomoserine sulfhydrylase compare
SMc04028 -6.0 -12.9 glutamate synthase compare
SMc03823 -6.0 -11.5 isopropylmalate isomerase large subunit compare
SMc00494 -6.0 -2.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc04005 -6.0 -8.2 pyruvate kinase compare
SMc00235 -5.9 -9.0 anthranilate phosphoribosyltransferase compare
SMc02725 -5.9 -11.3 anthranilate synthase compare
SMc03895 -5.8 -14.1 pyruvate carboxylase compare
SMc02767 -5.8 -8.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01801 -5.8 -4.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc01431 -5.8 -11.1 acetolactate synthase 3 catalytic subunit compare
SMc00293 -5.7 -11.7 homoserine dehydrogenase compare
SMc04045 -5.7 -8.7 dihydroxy-acid dehydratase compare
SMc00488 -5.7 -18.1 phosphoribosylformylglycinamidine synthase II compare
SMc00615 -5.7 -8.6 phosphoribosylaminoimidazole synthetase compare
SMc01004 -5.7 -10.9 phosphoribosyl-AMP cyclohydrolase compare
SMc00493 -5.7 -6.7 phosphoribosylformylglycinamidine synthase I compare
SMc02124 -5.6 -12.0 nitrite reductase compare
SMc00092 -5.6 -11.3 phosphoadenosine phosphosulfate reductase compare
SMc00918 -5.6 -9.3 ATP phosphoribosyltransferase regulatory subunit compare
SMc02245 -5.4 -5.3 dihydroorotate dehydrogenase 2 compare
SMc04026 -5.3 -9.2 glutamate synthase compare
SMc03797 -5.3 -12.4 homoserine O-succinyltransferase compare
SMc00090 -5.2 -11.2 sulfate adenylyltransferase compare
SMc02137 -5.2 -3.6 ornithine carbamoyltransferase compare
SMc04088 -5.1 -10.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03777 -5.1 -7.0 gamma-glutamyl phosphate reductase compare
SMc03979 -5.0 -3.5 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00495 -5.0 -5.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00554 -4.9 -5.9 amidophosphoribosyltransferase compare
SMc00412 -4.9 -3.4 orotidine 5'-phosphate decarboxylase compare
SMc00091 -4.9 -10.9 sulfate adenylyltransferase compare
SMc00711 -4.6 -5.2 cyclohexadienyl dehydrogenase compare
SMc02570 -4.5 -5.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc04001 -4.5 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc03776 -4.5 -4.4 gamma-glutamyl kinase compare
SMc02166 -4.5 -11.1 dihydroorotase compare
SMc02707 -4.4 -5.8 hypothetical protein compare
SMc03229 -4.4 -3.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02165 -4.3 -5.9 orotate phosphoribosyltransferase compare
SMc03069 -4.3 -2.9 6-phosphogluconolactonase compare
SM_b20904 -4.3 -3.7 sugar uptake ABC transporter ATP-binding protein compare
SMc03068 -4.2 -12.3 phosphogluconate dehydratase compare
SMc03070 -4.2 -5.0 glucose-6-phosphate 1-dehydrogenase compare
SM_b20902 -4.2 -14.1 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc02640 -4.2 -2.9 UDP-glucuronic acid epimerase compare
SM_b21177 -3.9 -8.9 phosphate uptake ABC transporter ATP-binding protein compare
SM_b21176 -3.9 -4.9 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc01430 -3.8 -8.1 acetolactate synthase 3 regulatory subunit compare
SMc02574 -3.8 -7.7 imidazoleglycerol-phosphate dehydratase compare
SMc03795 -3.8 -2.1 isopropylmalate isomerase small subunit compare
SMc00294 -3.7 -10.6 aminotransferase compare
SM_b20903 -3.6 -8.9 sugar uptake ABC transporter permease compare
SMc01053 -3.6 -5.1 siroheme synthase compare
SMc02755 -3.6 -5.5 S-adenosyl-L-homocysteine hydrolase compare
SMc01770 -3.6 -1.7 serine hydroxymethyltransferase compare
SM_b21174 -3.5 -5.2 phosphate uptake ABC transporter permease compare
SMc00017 -3.5 -1.9 homoserine kinase compare
SMc02138 -3.5 -5.8 acetylornithine transaminase compare
SMc03981 -3.4 -4.7 phosphoglycerate kinase compare
SMc00641 -3.4 -5.4 D-3-phosphoglycerate dehydrogenase compare
SMc04346 -3.4 -5.2 ketol-acid reductoisomerase compare
SMc03924 -3.4 -11.3 glycogen synthase compare
SMc02307 -3.3 -8.0 histidinol dehydrogenase compare
SMc02909 -3.3 -2.2 transglycosylase transmembrane protein compare
SMc01124 -3.3 -10.2 PII uridylyl-transferase compare
SMc00876 -3.2 -3.1 ATP-binding MRP protein compare
SMc00982 -3.2 -5.8 dioxygenase compare
SMc01440 -3.2 -5.6 hydrolase serine protease transmembrane protein compare
SMc02246 -3.2 -1.3 hypothetical protein compare
SMc01578 -3.1 -10.5 aspartate aminotransferase compare
SMc01206 -3.1 -1.7 queuine tRNA-ribosyltransferase compare
SM_b20307 -3.0 -1.7 dihydroxyacetone kinase compare
SMc01360 -2.9 -2.8 aspartate carbamoyltransferase catalytic subunit compare
SMc02835 -2.9 -8.6 glucokinase compare
SMc01441 -2.7 -5.8 membrane bound protease compare
SMc01361 -2.6 -1.8 dihydroorotase compare
SMc02451 -2.6 -2.1 hypothetical protein compare
SMc01220 -2.5 -5.4 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00302 -2.3 -1.5 hypothetical protein compare
SMc02055 -2.3 -2.4 phytoene synthase compare
SMc03153 -2.3 -4.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc02641 -2.3 -2.1 UDP-glucose 6-dehydrogenase compare
SMc01881 -2.2 -2.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01880 -2.1 -1.4 pantoate--beta-alanine ligase compare
SMc01028 -2.1 -11.2 phosphopyruvate hydratase compare
SMc03978 -2.0 -1.4 transketolase compare
SMc00450 -2.0 -1.3 protoheme IX farnesyltransferase compare
SMc01852 -1.9 -9.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc02683 -1.9 -2.5 hypothetical protein compare
SMc00709 -1.9 -2.7 hypothetical protein compare
SMc00414 -1.9 -10.9 hypothetical protein compare
SMc02838 -1.9 -6.1 phosphoglyceromutase compare
SMc02812 -1.8 -2.8 hypothetical protein compare
SMc02362 -1.8 -1.2 cytochrome c-type biogenesis protein CcmE compare
SMc02058 -1.8 -2.5 YAJC protein compare
SM_b21347 -1.8 -2.7 pectin degradation protein compare
SMc00981 -1.6 -5.2 ferredoxin protein compare
SMc04454 -1.6 -4.5 ABC transporter ATP-binding protein compare
SMc02983 -1.6 -5.4 ornithine, DAP, or arginine decarboxylase compare
SMc00492 -1.5 -0.8 hypothetical protein compare
SMc00914 -1.5 -2.6 oxidoreductase compare
SMc00013 -1.5 -1.4 cytochrome C oxidase subunit III transmembrane protein compare
SMc02685 -1.5 -3.0 hypothetical protein compare
SMc02112 -1.5 -4.6 hypothetical protein compare
SM_b20086 -1.5 -1.8 hypothetical protein compare
SMc00073 -1.4 -1.3 hypothetical protein compare
SMc01613 -1.4 -3.7 ribose-5-phosphate isomerase B compare
SMa1442 -1.4 -3.3 GntR family transcriptional regulator compare
SMc00569 -1.4 -2.8 hypothetical protein compare
SMc04052 -1.3 -1.6 transcriptional regulator compare
SMc02833 -1.3 -0.9 penicillin-insensitive murein endopeptidase compare
SMc01579 -1.3 -1.6 hypothetical protein compare
SMc00067 -1.3 -5.2 outer-membranne lipoprotein compare
SMa1118 -1.3 -1.9 HspC2 heat shock protein compare
SMc02050 -1.3 -2.1 trigger factor compare
SMc02861 -1.3 -1.7 phosphate transporter compare
SMc00329 -1.3 -2.2 iron response regulator protein compare
SMc01368 -1.2 -4.0 transport transmembrane protein compare
SM_b20270 -1.2 -2.1 proline racemase compare
SM_b20148 -1.2 -3.9 transcriptional regulator compare
SM_b20392 -1.2 -4.7 transcriptional regulator NanR compare
SMc00353 -1.2 -2.0 transmembrane protein compare
SMc00555 -1.2 -1.4 colicin V production transmembrane protein compare
SM_b20953 -1.2 -1.1 hypothetical protein compare
SMc00815 -1.2 -0.7 inosine 5'-monophosphate dehydrogenase compare
SMc01207 -1.2 -1.7 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02844 -1.2 -1.8 transcriptional regulator compare
SMc02620 -1.2 -6.1 hypothetical protein compare
SMc03899 -1.2 -1.0 hypothetical protein compare
SMa1365 -1.2 -1.6 ATP-binding protein compare
SM_b20616 -1.2 -2.4 thiamine biosynthesis oxidoreductase compare
SMc00191 -1.1 -1.7 hypothetical protein compare
SMa0789 -1.1 -2.3 GntR family transcriptional regulator compare
SMc02227 -1.1 -3.1 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc02573 -1.1 -1.9 hypothetical protein compare
SMc00187 -1.1 -2.4 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00619 -1.1 -1.0 hypothetical protein compare
SM_b20746 -1.1 -1.2 hypothetical protein compare
SMc02858 -1.1 -0.6 chaperone protein DnaJ compare
SMc03258 -1.1 -4.8 transcriptional regulator compare
SMc03993 -1.1 -4.0 hypothetical protein compare
SMc00760 -1.1 -3.0 recombinase A compare
SMc02460 -1.1 -5.9 hypothetical protein compare
SMc01472 -1.0 -1.2 50S ribosomal protein L11 methyltransferase compare
SMc03242 -1.0 -1.7 GTP-binding protein compare
SMc00804 -1.0 -1.9 hypothetical protein compare
SMc00405 -1.0 -5.6 hypothetical protein compare
SMc02753 -1.0 -0.7 PTS system transporter subunit IIA compare
SMc03763 -1.0 -0.9 cytosine-specific methyltransferase compare
SMc01119 -1.0 -1.7 hypothetical protein compare
SM_b22001 -1.0 -1.5 hypothetical protein compare
SMc02385 -1.0 -2.0 hypothetical protein compare
SMc02659 -1.0 -3.1 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc03072 -1.0 -2.0 hypothetical protein compare
SMc01842 -1.0 -1.1 methyltransferase transcription regulator protein compare
SMc01164 -1.0 -3.8 hypothetical protein compare
SMa0674 -1.0 -1.5 hypothetical protein compare
SM_b20994 -1.0 -3.6 hypothetical protein compare
SMc01939 -1.0 -0.9 urease subunit beta compare
SM_b21132 -1.0 -1.9 sulfate ABC transporter permease compare
SMc00556 -1.0 -3.2 DNA repair protein RadA compare
SM_b21374 -1.0 -1.9 tagatose kinase (EC 2.7.1.101) (from data) compare
SM_b21598 -1.0 -3.5 transcriptional regulator compare
SMa2215 -1.0 -1.9 GntR family transcriptional regulator compare
SMc04391 -1.0 -1.6 3-ketoacyl-ACP reductase compare
SMc02077 -1.0 -1.9 exodeoxyribonuclease III protein compare
SMc00727 -1.0 -5.3 3-hydroxybutyryl-CoA dehydrogenase compare
SMc02724 -0.9 -2.2 hypothetical protein compare
SMc00622 -0.9 -4.0 ribonuclease D protein compare
SMc00010 -0.9 -1.0 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03974 -0.9 -4.0 hypothetical protein compare
SMc03839 -0.9 -1.6 hypothetical protein compare
SMc01651 -0.9 -1.7 transcriptional regulator compare
SM_b21130 -0.9 -4.3 sulfate ABC transporter ATP-binding protein compare
SMc01454 -0.9 -5.8 hypothetical protein compare
SMa0286 -0.9 -2.2 hypothetical protein compare
SMc03006 -0.9 -1.0 chemotaxis regulator protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in carbon source experiments

For carbon source D-Glucose across organisms