Experiment set9IT053 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -4.9 -4.7 colicin V production protein compare
BWI76_RS10990 -4.9 -4.7 dihydroorotase compare
BWI76_RS00400 -4.8 -3.3 glutamine synthetase compare
BWI76_RS23240 -4.7 -3.3 exonuclease V subunit gamma compare
BWI76_RS01800 -3.9 -5.0 glucose-6-phosphate isomerase compare
BWI76_RS01210 -3.6 -2.7 tyrosine recombinase XerC compare
BWI76_RS05200 -3.5 -4.1 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS11965 -3.3 -4.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS02995 -3.2 -9.8 aspartate carbamoyltransferase compare
BWI76_RS09660 -3.2 -2.2 DNA translocase FtsK compare
BWI76_RS01615 -3.2 -12.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09910 -3.1 -15.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04470 -3.1 -9.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS27390 -2.9 -7.7 ribonuclease PH compare
BWI76_RS20895 -2.8 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS23230 -2.6 -4.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS04465 -2.6 -4.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02410 -2.6 -2.5 EF-P beta-lysylation protein EpmB compare
BWI76_RS20350 -2.5 -7.7 amidophosphoribosyltransferase compare
BWI76_RS20965 -2.5 -4.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS07070 -2.4 -7.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00180 -2.4 -2.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS01610 -2.4 -9.7 phosphoribosylamine--glycine ligase compare
BWI76_RS21265 -2.4 -11.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20650 -2.4 -3.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS09190 -2.3 -4.9 hypothetical protein compare
BWI76_RS27385 -2.3 -6.9 orotate phosphoribosyltransferase compare
BWI76_RS00855 -2.3 -10.7 argininosuccinate lyase compare
BWI76_RS17250 -2.2 -8.9 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
BWI76_RS23920 -2.1 -4.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS07065 -2.1 -6.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS22755 -2.0 -7.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01200 -2.0 -2.0 diaminopimelate epimerase compare
BWI76_RS04160 -1.9 -5.2 phosphoserine phosphatase compare
BWI76_RS09730 -1.9 -2.2 pyruvate formate lyase 1-activating protein compare
BWI76_RS26460 -1.9 -4.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS00835 -1.9 -11.5 phosphoenolpyruvate carboxylase compare
BWI76_RS09645 -1.8 -1.6 thioredoxin-disulfide reductase compare
BWI76_RS21310 -1.8 -1.4 DNA repair protein RecO compare
BWI76_RS02530 -1.8 -2.5 tRNA dimethylallyltransferase compare
BWI76_RS09755 -1.7 -7.6 phosphoserine transaminase compare
BWI76_RS22690 -1.7 -3.3 adenylyl-sulfate kinase compare
BWI76_RS15835 -1.6 -1.7 hypothetical protein compare
BWI76_RS25115 -1.6 -8.0 argininosuccinate synthase compare
BWI76_RS01350 -1.6 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS26085 -1.6 -2.6 3-dehydroquinate synthase compare
BWI76_RS17720 -1.5 -1.2 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS05070 -1.5 -1.8 type II secretion system protein GspH compare
BWI76_RS26455 -1.5 -2.7 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS25065 -1.4 -2.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS22760 -1.4 -5.1 sulfite reductase subunit beta compare
BWI76_RS22765 -1.3 -5.8 sulfite reductase subunit alpha compare
BWI76_RS18770 -1.3 -1.3 DNA gyrase inhibitor compare
BWI76_RS00745 -1.3 -3.8 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
BWI76_RS26570 -1.2 -2.9 anion permease compare
BWI76_RS04305 -1.2 -1.3 molecular chaperone DnaJ compare
BWI76_RS04240 -1.2 -2.2 thr operon leader peptide compare
BWI76_RS25335 -1.2 -3.1 stringent starvation protein A compare
BWI76_RS09735 -1.2 -4.5 formate acetyltransferase compare
BWI76_RS11130 -1.2 -4.2 PTS glucose transporter subunit IIBC compare
BWI76_RS12090 -1.1 -2.6 HNH endonuclease compare
BWI76_RS15845 -1.1 -1.2 hypothetical protein compare
BWI76_RS16965 -1.1 -2.4 murein lipoprotein compare
BWI76_RS00345 -1.1 -2.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS17805 -1.1 -1.5 membrane protein compare
BWI76_RS24900 -1.1 -1.4 DeoR family transcriptional regulator compare
BWI76_RS23265 -1.1 -2.9 hypothetical protein compare
BWI76_RS26095 -1.1 -1.3 shikimate kinase compare
BWI76_RS16355 -1.1 -3.1 electron transport complex subunit A compare
BWI76_RS22205 -1.1 -2.6 cation ABC transporter ATP-binding protein compare
BWI76_RS04510 -1.0 -2.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS26075 -1.0 -1.7 DNA adenine methylase compare
BWI76_RS05450 -1.0 -1.5 ribonuclease HI compare
BWI76_RS15115 -1.0 -4.9 MFS transporter compare
BWI76_RS00355 -1.0 -1.4 DNA polymerase I compare
BWI76_RS25000 -1.0 -1.5 malonate decarboxylase acyl carrier protein compare
BWI76_RS03920 -1.0 -2.2 N-acetyltransferase compare
BWI76_RS04645 -1.0 -5.2 3-dehydroquinase compare
BWI76_RS00850 -1.0 -4.9 acetylglutamate kinase compare
BWI76_RS14155 -1.0 -2.7 transketolase compare
BWI76_RS22805 -0.9 -5.5 GTP diphosphokinase compare
BWI76_RS21710 -0.9 -3.7 nitroreductase compare
BWI76_RS24025 -0.9 -4.9 agmatinase compare
BWI76_RS17155 -0.9 -1.3 hypothetical protein compare
BWI76_RS06765 -0.9 -1.7 transcriptional regulator compare
BWI76_RS23885 -0.9 -1.1 2-octaprenylphenol hydroxylase compare
BWI76_RS25960 -0.9 -2.7 NUDIX hydrolase compare
BWI76_RS02930 -0.9 -3.7 anaerobic ribonucleoside-triphosphate reductase activating protein compare
BWI76_RS04060 -0.9 -1.7 hypothetical protein compare
BWI76_RS15235 -0.9 -1.8 hypothetical protein compare
BWI76_RS21200 -0.9 -2.0 aldose epimerase compare
BWI76_RS14835 -0.9 -1.3 hypothetical protein compare
BWI76_RS21450 -0.9 -1.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS16485 -0.8 -1.5 ribonuclease T compare
BWI76_RS20640 -0.8 -3.0 cysteine synthase A compare
BWI76_RS07865 -0.8 -2.5 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS20360 -0.8 -0.9 cell division protein DedD compare
BWI76_RS16675 -0.8 -1.2 ABC transporter compare
BWI76_RS10245 -0.8 -2.0 aspartate aminotransferase compare
BWI76_RS21690 -0.8 -0.9 hypothetical protein compare
BWI76_RS27605 -0.8 -2.1 hypothetical protein compare
BWI76_RS02935 -0.8 -4.6 anaerobic ribonucleoside triphosphate reductase compare
BWI76_RS18940 -0.8 -2.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS06075 -0.8 -2.5 taurine transporter subunit compare
BWI76_RS21370 -0.8 -1.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS26980 -0.8 -1.8 cold-shock protein compare
BWI76_RS09760 -0.8 -2.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01325 -0.8 -1.7 twin-arginine translocase subunit TatB compare
BWI76_RS12040 -0.8 -1.1 hypothetical protein compare
BWI76_RS20380 -0.8 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS03010 -0.8 -3.7 ornithine carbamoyltransferase compare
BWI76_RS04565 -0.8 -2.4 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS16470 -0.7 -1.2 transcriptional repressor NemR compare
BWI76_RS11635 -0.7 -1.2 ABC transporter compare
BWI76_RS23480 -0.7 -5.0 EAL domain-containing protein compare
BWI76_RS21505 -0.7 -1.0 hypothetical protein compare
BWI76_RS05965 -0.7 -1.6 hypothetical protein compare
BWI76_RS25070 -0.7 -1.1 hypothetical protein compare
BWI76_RS25630 -0.7 -2.1 hypothetical protein compare
BWI76_RS08180 -0.7 -3.7 asparagine synthase B compare
BWI76_RS05260 -0.7 -1.2 chaperone compare
BWI76_RS19980 -0.7 -2.6 2-keto-3-deoxy-L-rhamnonate aldolase compare
BWI76_RS14980 -0.7 -1.4 hypothetical protein compare
BWI76_RS06535 -0.7 -1.8 endopeptidase La compare
BWI76_RS01065 -0.7 -2.4 ATP-dependent RNA helicase RhlB compare
BWI76_RS18000 -0.7 -1.5 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS01090 -0.7 -3.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS09935 -0.7 -1.9 paraquat-inducible membrane protein A compare
BWI76_RS03025 -0.7 -1.2 N-acetyltransferase compare
BWI76_RS04515 -0.7 -1.1 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS13240 -0.7 -1.1 hypothetical protein compare
BWI76_RS05015 -0.7 -1.4 transcriptional regulator compare
BWI76_RS10060 -0.7 -1.1 acylphosphatase compare
BWI76_RS01185 -0.7 -1.1 adenylate cyclase compare
BWI76_RS04270 -0.7 -3.1 transaldolase compare
BWI76_RS25320 -0.7 -3.5 glutamate synthase compare
BWI76_RS03045 -0.7 -0.9 hypothetical protein compare
BWI76_RS12925 -0.7 -1.5 efflux transporter periplasmic adaptor subunit compare
BWI76_RS15725 -0.7 -2.1 hypothetical protein compare
BWI76_RS16895 -0.7 -1.0 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS11900 -0.7 -0.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS00390 -0.6 -2.0 two-component system sensor histidine kinase NtrB compare
BWI76_RS24120 -0.6 -2.6 YggW family oxidoreductase compare
BWI76_RS00385 -0.6 -4.0 nitrogen assimilation regulatory protein compare
BWI76_RS15940 -0.6 -1.4 DMSO reductase maturation protein DsmD compare
BWI76_RS15830 -0.6 -2.1 hypothetical protein compare
BWI76_RS27430 -0.6 -0.7 (p)ppGpp synthetase compare
BWI76_RS08210 -0.6 -1.5 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS13595 -0.6 -2.9 transcriptional regulator compare
BWI76_RS06015 -0.6 -0.9 hypothetical protein compare
BWI76_RS00480 -0.6 -1.3 hypothetical protein compare
BWI76_RS01205 -0.6 -1.3 DUF484 family protein compare
BWI76_RS08750 -0.6 -0.9 kinase inhibitor compare
BWI76_RS02610 -0.6 -2.2 transcriptional regulator compare
BWI76_RS11920 -0.6 -2.6 hypothetical protein compare
BWI76_RS01125 -0.6 -2.3 4-alpha-L-fucosyltransferase compare
BWI76_RS18925 -0.6 -1.7 histidinol dehydrogenase compare
BWI76_RS26405 -0.6 -0.9 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS12375 -0.6 -2.0 DNA-invertase hin compare
BWI76_RS00335 -0.6 -2.0 hypothetical protein compare
BWI76_RS23220 -0.6 -2.3 amino-acid N-acetyltransferase compare
BWI76_RS15605 -0.6 -1.3 hypothetical protein compare
BWI76_RS13070 -0.6 -2.0 hypothetical protein compare
BWI76_RS16360 -0.6 -1.0 electron transport complex subunit RsxB compare
BWI76_RS09655 -0.6 -2.7 leucine-responsive regulatory protein compare
BWI76_RS01545 -0.6 -1.0 thiamine biosynthesis protein ThiS compare
BWI76_RS01940 -0.6 -0.9 hypothetical protein compare
BWI76_RS04955 -0.6 -0.8 hypoxanthine phosphoribosyltransferase compare
BWI76_RS21565 -0.6 -0.8 outer membrane protein assembly factor BamE compare
BWI76_RS14670 -0.6 -1.6 hypothetical protein compare
BWI76_RS10955 -0.6 -1.3 hypothetical protein compare
BWI76_RS06740 -0.6 -2.5 50S ribosomal protein L36 compare
BWI76_RS00875 -0.6 -2.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS09740 -0.6 -3.6 formate transporter FocA compare
BWI76_RS27505 -0.6 -1.4 septal ring assembly protein ZapB compare
BWI76_RS05135 -0.6 -2.1 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS24115 -0.6 -2.0 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS16910 -0.6 -1.6 2-keto-4-pentenoate hydratase compare
BWI76_RS26055 -0.6 -3.4 siroheme synthase compare
BWI76_RS27440 -0.6 -1.5 DNA helicase RecG compare
BWI76_RS22810 -0.6 -2.2 23S rRNA (uracil(1939)-C(5))-methyltransferase compare
BWI76_RS04255 -0.6 -2.7 threonine synthase compare
BWI76_RS15225 -0.6 -1.9 DeoR family transcriptional regulator compare
BWI76_RS10285 -0.6 -2.0 family 3 extracellular solute-binding protein compare
BWI76_RS03700 -0.6 -2.0 hypothetical protein compare
BWI76_RS22450 -0.6 -0.7 selenoprotein W-related protein compare
BWI76_RS11040 -0.6 -1.8 ribonuclease E compare
BWI76_RS25480 -0.6 -1.8 ribonuclease E/G compare
BWI76_RS10760 -0.6 -2.2 nitroreductase family protein compare
BWI76_RS11365 -0.6 -1.9 iron ABC transporter compare
BWI76_RS10890 -0.6 -1.9 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS01105 -0.5 -2.3 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS08380 -0.5 -0.7 endonuclease VIII compare
BWI76_RS17390 -0.5 -1.4 DsrE family protein compare
BWI76_RS00845 -0.5 -2.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04250 -0.5 -2.3 homoserine kinase compare
BWI76_RS03080 -0.5 -1.5 (Fe-S)-cluster assembly protein compare
BWI76_RS08665 -0.5 -2.1 6-phosphogluconolactonase compare
BWI76_RS03005 -0.5 -2.3 hypothetical protein compare
BWI76_RS19885 -0.5 -1.3 multidrug ABC transporter permease/ATP-binding protein compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community 0.1mM glass beads in Klebsiella michiganensis M5al

For mixed community 0.1mM glass beads across organisms