Experiment set9IT052 for Sinorhizobium meliloti 1021

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
SMc02766 -7.9 -10.8 tryptophan synthase subunit beta compare
SMc02899 -7.4 -8.9 prephenate dehydratase compare
SMc02767 -7.3 -7.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00235 -7.3 -5.0 anthranilate phosphoribosyltransferase compare
SMc01054 -7.1 -4.9 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc02572 -7.1 -5.8 imidazole glycerol phosphate synthase subunit HisH compare
SMc01494 -6.9 -14.1 phosphoserine phosphatase compare
SMc00917 -6.9 -4.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02123 -6.9 -4.1 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc01843 -6.7 -11.1 5,10-methylenetetrahydrofolate reductase compare
SMc00640 -6.6 -4.5 phosphoserine aminotransferase compare
SMc00615 -6.5 -14.5 phosphoribosylaminoimidazole synthetase compare
SMc04026 -6.5 -7.7 glutamate synthase compare
SMc00711 -6.4 -4.4 cyclohexadienyl dehydrogenase compare
SMc04045 -6.4 -7.6 dihydroxy-acid dehydratase compare
SMa1635 -6.2 -2.6 hypothetical protein compare
SMc03797 -6.2 -10.4 homoserine O-succinyltransferase compare
SMc00614 -6.2 -7.4 phosphoribosylglycinamide formyltransferase compare
SMc02765 -6.2 -11.9 tryptophan synthase subunit alpha compare
SMc02717 -6.2 -10.3 2-isopropylmalate synthase compare
SMc00918 -6.1 -8.3 ATP phosphoribosyltransferase regulatory subunit compare
SMc00494 -6.0 -2.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03823 -6.0 -12.2 isopropylmalate isomerase large subunit compare
SMc00131 -6.0 -15.5 transcriptional regulator compare
SMc01801 -5.9 -4.1 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00090 -5.9 -9.0 sulfate adenylyltransferase compare
SMc02569 -5.8 -5.7 imidazole glycerol phosphate synthase subunit HisF compare
SMc03895 -5.8 -14.9 pyruvate carboxylase compare
SMc04028 -5.6 -15.9 glutamate synthase compare
SMc02124 -5.6 -12.6 nitrite reductase compare
SMc04405 -5.6 -10.7 3-isopropylmalate dehydrogenase compare
SMc03112 -5.6 -18.0 B12-dependent methionine synthase compare
SMc01726 -5.6 -7.6 acetylglutamate kinase compare
SMc04002 -5.5 -6.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01004 -5.5 -10.8 phosphoribosyl-AMP cyclohydrolase compare
SMc01431 -5.4 -12.5 acetolactate synthase 3 catalytic subunit compare
SMc00092 -5.3 -12.4 phosphoadenosine phosphosulfate reductase compare
SMc00554 -5.3 -6.3 amidophosphoribosyltransferase compare
SMc00488 -5.3 -18.5 phosphoribosylformylglycinamidine synthase II compare
SMc02217 -5.2 -7.1 O-succinylhomoserine sulfhydrylase compare
SMc00236 -5.2 -5.4 Indole-3-glycerol phosphate synthase compare
SMc02725 -5.1 -11.9 anthranilate synthase compare
SMc04088 -5.0 -10.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00293 -5.0 -14.7 homoserine dehydrogenase compare
SMc00412 -5.0 -3.4 orotidine 5'-phosphate decarboxylase compare
SMc02245 -5.0 -5.8 dihydroorotate dehydrogenase 2 compare
SMc00993 -4.9 -11.9 phosphoribosylamine--glycine ligase compare
SMc00495 -4.9 -5.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc04005 -4.9 -9.4 pyruvate kinase compare
SMc02166 -4.7 -11.3 dihydroorotase compare
SMc03776 -4.6 -4.5 gamma-glutamyl kinase compare
SMc00493 -4.6 -6.5 phosphoribosylformylglycinamidine synthase I compare
SMc04001 -4.6 -1.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SM_b20902 -4.6 -15.4 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc02165 -4.5 -5.4 orotate phosphoribosyltransferase compare
SMc03229 -4.5 -3.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02137 -4.5 -4.3 ornithine carbamoyltransferase compare
SMc02570 -4.4 -5.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SM_b21177 -4.4 -8.4 phosphate uptake ABC transporter ATP-binding protein compare
SMc00641 -4.4 -7.3 D-3-phosphoglycerate dehydrogenase compare
SMc02138 -4.3 -8.0 acetylornithine transaminase compare
SMc00091 -4.3 -10.4 sulfate adenylyltransferase compare
SMc02755 -4.2 -5.0 S-adenosyl-L-homocysteine hydrolase compare
SMc03070 -4.2 -5.0 glucose-6-phosphate 1-dehydrogenase compare
SMc03777 -4.0 -8.5 gamma-glutamyl phosphate reductase compare
SM_b20903 -3.9 -11.0 sugar uptake ABC transporter permease compare
SMc01430 -3.9 -7.1 acetolactate synthase 3 regulatory subunit compare
SM_b21175 -3.9 -5.1 phosphate uptake ABC transporter permease compare
SMc02707 -3.9 -5.7 hypothetical protein compare
SMc03795 -3.9 -2.2 isopropylmalate isomerase small subunit compare
SMc01053 -3.8 -4.4 siroheme synthase compare
SMc03153 -3.8 -4.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc00294 -3.8 -13.4 aminotransferase compare
SMc03068 -3.7 -10.2 phosphogluconate dehydratase compare
SM_b21174 -3.6 -6.0 phosphate uptake ABC transporter permease compare
SMc00017 -3.6 -2.0 homoserine kinase compare
SMc01360 -3.6 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc00876 -3.6 -2.5 ATP-binding MRP protein compare
SMc02574 -3.5 -6.4 imidazoleglycerol-phosphate dehydratase compare
SMc02640 -3.5 -4.7 UDP-glucuronic acid epimerase compare
SM_b21176 -3.5 -6.2 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00982 -3.4 -5.7 dioxygenase compare
SMc03981 -3.4 -5.8 phosphoglycerate kinase compare
SMc03979 -3.4 -4.0 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00302 -3.4 -1.9 hypothetical protein compare
SMc04346 -3.4 -5.2 ketol-acid reductoisomerase compare
SMc02246 -3.2 -1.3 hypothetical protein compare
SMc03069 -3.2 -2.4 6-phosphogluconolactonase compare
SMc01124 -3.2 -9.6 PII uridylyl-transferase compare
SMc01770 -3.2 -2.3 serine hydroxymethyltransferase compare
SMc03924 -3.1 -9.7 glycogen synthase compare
SMc00726 -3.0 -1.2 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02835 -2.9 -7.5 glucokinase compare
SMc01578 -2.9 -10.6 aspartate aminotransferase compare
SMc02307 -2.8 -8.3 histidinol dehydrogenase compare
SMc01881 -2.8 -2.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SM_b20904 -2.8 -5.2 sugar uptake ABC transporter ATP-binding protein compare
SMc00987 -2.7 -2.6 hypothetical protein compare
SMc02058 -2.6 -3.6 YAJC protein compare
SMc01440 -2.6 -5.9 hydrolase serine protease transmembrane protein compare
SMc01028 -2.4 -12.1 phosphopyruvate hydratase compare
SMc02641 -2.3 -2.2 UDP-glucose 6-dehydrogenase compare
SMc00981 -2.2 -5.7 ferredoxin protein compare
SMc01880 -2.2 -1.5 pantoate--beta-alanine ligase compare
SMc03978 -2.1 -1.4 transketolase compare
SMc02838 -2.1 -6.9 phosphoglyceromutase compare
SMc01441 -2.1 -4.8 membrane bound protease compare
SMc02050 -2.1 -4.6 trigger factor compare
SMc02861 -2.0 -2.2 phosphate transporter compare
SMc01361 -1.9 -2.6 dihydroorotase compare
SMc01852 -1.9 -9.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc00565 -1.8 -1.8 50S ribosomal protein L9 compare
SMc00414 -1.8 -10.5 hypothetical protein compare
SMc02983 -1.8 -6.7 ornithine, DAP, or arginine decarboxylase compare
SMc02753 -1.8 -1.0 PTS system transporter subunit IIA compare
SMc03100 -1.8 -1.6 hypothetical protein compare
SMc01220 -1.8 -4.8 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00914 -1.7 -2.8 oxidoreductase compare
SMc02407 -1.7 -6.5 hypothetical protein compare
SMc02694 -1.7 -1.9 ATP-dependent Clp protease adaptor compare
SMc00191 -1.6 -1.6 hypothetical protein compare
SMc00088 -1.5 -1.6 hypothetical protein compare
SMc01568 -1.4 -1.4 hypothetical protein compare
SMc02434 -1.4 -1.8 hypothetical protein compare
SMc00295 -1.4 -1.2 hypothetical protein compare
SMc02145 -1.4 -0.8 signal peptide protein compare
SMc02112 -1.4 -5.9 hypothetical protein compare
SMc00012 -1.4 -1.5 cytochrome C oxidase assembly protein compare
SMc02141 -1.4 -1.3 phosphate transporter PhoU compare
SMc03763 -1.3 -0.9 cytosine-specific methyltransferase compare
SMc01845 -1.3 -1.6 transglycosylase transmembrane protein compare
SMa2215 -1.3 -3.9 GntR family transcriptional regulator compare
SMc01613 -1.3 -4.6 ribose-5-phosphate isomerase B compare
SMc01368 -1.3 -4.9 transport transmembrane protein compare
SMc02055 -1.3 -2.0 phytoene synthase compare
SMc02227 -1.2 -4.5 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc02385 -1.2 -2.4 hypothetical protein compare
SM_b21035 -1.2 -4.3 hypothetical protein compare
SMc00815 -1.2 -0.7 inosine 5'-monophosphate dehydrogenase compare
SMc04404 -1.2 -1.6 amino acid efflux transmembrane protein compare
SMc02858 -1.1 -0.6 chaperone protein DnaJ compare
SMc01183 -1.1 -0.8 LexA repressor compare
SMc02228 -1.1 -5.1 acetyl-CoA acetyltransferase compare
SMc00667 -1.1 -1.6 hypothetical protein compare
SMc04454 -1.1 -4.4 ABC transporter ATP-binding protein compare
SM_b20258 -1.1 -2.7 transcriptional regulator compare
SMc02812 -1.1 -2.1 hypothetical protein compare
SMc02683 -1.1 -1.9 hypothetical protein compare
SMc00579 -1.1 -4.5 dimethyladenosine transferase compare
SMc01207 -1.0 -1.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SM_b20294 -1.0 -1.1 transcriptional regulator NanR compare
SMc02229 -1.0 -6.5 acyl-CoA dehydrogenase compare
SMc00514 -1.0 -2.1 monooxygenase compare
SMc02724 -1.0 -2.2 hypothetical protein compare
SMc00067 -1.0 -4.7 outer-membranne lipoprotein compare
SM_b21181 -1.0 -4.4 glutaryl-CoA dehydrogenase compare
SMc01147 -1.0 -0.7 coproporphyrinogen III oxidase compare
SMc00427 -1.0 -1.2 peptide chain release factor RF-3 protein compare
SMc02758 -1.0 -3.0 nucleotidyl transferase compare
SM_b21133 -1.0 -5.8 sulfate ABC transporter substrate-binding protein compare
SMc01454 -1.0 -6.7 hypothetical protein compare
SM_b20602 -1.0 -3.8 branched-chain amino acid ABC transporter ATP-binding protein compare
SM_b21511 -1.0 -1.4 plasmid stability protein compare
SMc00353 -1.0 -1.8 transmembrane protein compare
SM_b20021 -0.9 -1.0 transcriptional regulator compare
SMc01091 -0.9 -2.1 hypothetical protein compare
SMc03053 -0.9 -0.9 flagellar biosynthesis protein FliQ compare
SM_b21132 -0.9 -3.2 sulfate ABC transporter permease compare
SM_b20392 -0.9 -3.6 transcriptional regulator NanR compare
SMc03258 -0.9 -4.7 transcriptional regulator compare
SMc00513 -0.9 -4.5 amino acid-binding periplasmic protein compare
SMc04042 -0.9 -4.9 monophosphatase compare
SMc04348 -0.8 -1.0 transcriptional regulator compare
SMc02460 -0.8 -5.6 hypothetical protein compare
SMc03996 -0.8 -1.9 thiamine-phosphate pyrophosphorylase compare
SMc02232 -0.8 -1.5 hypothetical protein compare
SMc02659 -0.8 -2.7 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SM_b20948 -0.8 -1.1 glucosyltransferase compare
SM_b21182 -0.8 -5.3 hypothetical protein compare
SMc01208 -0.8 -1.5 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00555 -0.8 -1.1 colicin V production transmembrane protein compare
SM_b20320 -0.8 -1.4 TRAP-type large permease component compare
SMc00378 -0.8 -2.2 exodeoxyribonuclease VII large subunit compare
SMa0293 -0.8 -2.5 hypothetical protein compare
SMa0052 -0.8 -2.7 hypothetical protein compare
SMc01579 -0.8 -1.2 hypothetical protein compare
SMa0325 -0.8 -2.1 hypothetical protein compare
SMc03980 -0.8 -3.6 hypothetical protein compare
SMc01725 -0.8 -2.3 hypothetical protein compare
SMc02543 -0.8 -3.5 hypothetical protein compare
SMc02558 -0.8 -2.1 hypothetical protein compare
SMc00775 -0.8 -5.7 iron(III) permease compare
SMc02510 -0.8 -0.5 ferric uptake regulation protein compare
SMc02035 -0.8 -2.9 oxidoreductase compare
SMc00784 -0.8 -5.5 iron binding protein compare
SM_b20006 -0.8 -2.4 hypothetical protein compare
SMc02308 -0.8 -2.0 hypothetical protein compare
SM_b20452 -0.8 -2.1 hypothetical protein compare
SMc01043 -0.7 -3.7 nitrogen assimilation regulatory protein compare
SMc03974 -0.7 -1.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in carbon source experiments

For carbon source D-Glucose across organisms