Experiment set9IT051 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Diallyl sulfide 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.2 -6.3 SirA-like protein compare
Psyr_4341 -3.8 -10.5 thiamine-phosphate diphosphorylase compare
Psyr_4340 -3.7 -12.0 phosphomethylpyrimidine kinase, putative compare
Psyr_0034 -3.5 -3.4 tryptophan synthase, beta chain compare
Psyr_4991 -3.3 -2.3 hypothetical protein compare
Psyr_4740 -3.2 -7.7 thiazole-phosphate synthase compare
Psyr_4687 -3.0 -11.2 biotin synthase compare
Psyr_4684 -2.9 -3.7 biotin synthesis protein BioC compare
Psyr_1121 -2.8 -3.0 6-phosphogluconolactonase compare
Psyr_4203 -2.7 -4.0 SsrA-binding protein compare
Psyr_0951 -2.6 -4.9 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_3193 -2.5 -4.6 Transcription factor jumonji, jmjC compare
Psyr_0454 -2.4 -7.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_4683 -2.3 -4.7 dethiobiotin synthase compare
Psyr_3208 -2.3 -3.9 NADH dehydrogenase subunit M compare
Psyr_4091 -2.1 -4.6 8-oxo-dGTPase compare
Psyr_3419 -2.1 -5.6 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4686 -2.1 -6.9 8-amino-7-oxononanoate synthase compare
Psyr_2980 -2.1 -4.2 UDP-glucose pyrophosphorylase compare
Psyr_1373 -2.0 -4.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3947 -2.0 -3.1 Methyltransferase, putative compare
Psyr_0835 -1.9 -6.5 transcriptional regulator, TraR/DksA family compare
Psyr_1663 -1.9 -4.9 phosphoribosylanthranilate isomerase compare
Psyr_4140 -1.9 -2.7 Protein of unknown function DUF140 compare
Psyr_5133 -1.8 -4.9 tRNA modification GTPase trmE compare
Psyr_4115 -1.8 -3.0 phosphoheptose isomerase compare
Psyr_1613 -1.8 -4.3 septum site-determining protein MinC compare
Psyr_1419 -1.8 -4.6 preQ(0) biosynthesis protein QueC compare
Psyr_4418 -1.8 -3.0 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4194 -1.8 -5.8 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_5132 -1.7 -4.5 Glucose-inhibited division protein A subfamily compare
Psyr_3287 -1.7 -2.1 DNA topoisomerase I compare
Psyr_0255 -1.7 -2.8 glutamate-cysteine ligase compare
Psyr_0529 -1.6 -5.0 Glycosyl transferase, group 1 compare
Psyr_0033 -1.6 -3.1 tryptophan synthase, alpha chain compare
Psyr_2593 -1.6 -2.6 ABC transporter compare
Psyr_3020 -1.5 -2.6 precorrin-4 C11-methyltransferase compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_4519 -1.5 -5.9 General substrate transporter:Major facilitator superfamily compare
Psyr_0475 -1.4 -3.4 Protein of unknown function YGGT compare
Psyr_3014 -1.4 -3.5 protoporphyrin IX magnesium-chelatase compare
Psyr_1910 -1.4 -4.5 VacJ-like lipoprotein compare
Psyr_3698 -1.3 -4.8 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_3675 -1.3 -2.9 adenosylcobinamide kinase compare
Psyr_4580 -1.3 -2.7 anthranilate phosphoribosyltransferase compare
Psyr_0917 -1.3 -8.1 ABC-2 compare
Psyr_3055 -1.2 -2.0 Aminoglycoside phosphotransferase compare
Psyr_0885 -1.2 -2.5 conserved hypothetical protein compare
Psyr_0826 -1.2 -5.2 glucose-6-phosphate isomerase compare
Psyr_1947 -1.2 -2.7 MbtH-like protein compare
Psyr_3202 -1.2 -1.8 NADH dehydrogenase subunit G compare
Psyr_4566 -1.2 -6.0 Peptidase M23B compare
Psyr_3808 -1.2 -1.7 hypothetical protein compare
Psyr_4362 -1.2 -1.9 Rare lipoprotein A compare
Psyr_0531 -1.2 -2.2 LmbE-like protein compare
Psyr_4158 -1.1 -6.4 conserved hypothetical protein compare
Psyr_2897 -1.1 -4.5 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0385 -1.1 -3.0 phosphoribosyl-ATP pyrophosphatase compare
Psyr_1418 -1.1 -2.8 Radical SAM compare
Psyr_0575 -1.1 -2.0 protease FtsH subunit HflC compare
Psyr_4634 -1.1 -0.9 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_1017 -1.1 -2.4 type III effector HopJ1 compare
Psyr_4582 -1.1 -1.3 hypothetical protein compare
Psyr_2143 -1.1 -1.8 delta1-piperideine 2-carboxylate reductase compare
Psyr_0918 -1.1 -8.0 ABC transporter compare
Psyr_0014 -1.1 -1.0 lipid A biosynthesis acyltransferase compare
Psyr_3554 -1.1 -1.4 Carbon storage regulator compare
Psyr_4141 -1.1 -3.3 ABC transporter compare
Psyr_1747 -1.1 -3.6 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_4139 -1.0 -3.7 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_2344 -1.0 -3.2 CDS compare
Psyr_2456 -1.0 -1.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_0487 -1.0 -2.2 glutathione synthase compare
Psyr_1410 -1.0 -2.6 Holliday junction DNA helicase RuvB compare
Psyr_3755 -1.0 -1.7 conserved hypothetical protein compare
Psyr_3459 -1.0 -2.3 Helix-turn-helix, Fis-type compare
Psyr_0831 -1.0 -2.1 Two-component response regulator CbrB compare
Psyr_0936 -1.0 -6.1 Glycosyl transferase, group 1 compare
Psyr_3681 -1.0 -2.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_2562 -0.9 -1.6 hypothetical protein compare
Psyr_1614 -0.9 -0.9 lipid A biosynthesis acyltransferase compare
Psyr_3644 -0.9 -2.1 prephenate dehydrogenase compare
Psyr_1650 -0.9 -1.8 aminodeoxychorismate lyase apoprotein compare
Psyr_1350 -0.9 -3.6 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_3678 -0.9 -3.4 adenosylcobinamide-phosphate synthase compare
Psyr_4512 -0.9 -4.2 putative phage-related protein compare
Psyr_2231 -0.9 -2.3 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_0437 -0.9 -2.2 acyl carrier protein, putative compare
Psyr_1094 -0.9 -3.1 cold-shock DNA-binding protein family compare
Psyr_2582 -0.9 -4.7 TonB-dependent siderophore receptor compare
Psyr_2540 -0.9 -1.8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4460 -0.9 -1.7 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_2591 -0.9 -4.0 transport system permease protein compare
Psyr_5072 -0.9 -1.1 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_0849 -0.9 -5.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3796 -0.9 -2.1 transcriptional regulator, LysR family compare
Psyr_1371 -0.9 -4.1 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2590 -0.9 -2.0 Periplasmic binding protein compare
Psyr_3776 -0.8 -2.6 Cytosine deaminase compare
Psyr_2558 -0.8 -3.6 hypothetical protein compare
Psyr_1378 -0.8 -1.4 RecA protein compare
Psyr_0281 -0.8 -1.9 ABC transporter compare
Psyr_4138 -0.8 -2.2 Toluene tolerance compare
Psyr_2330 -0.8 -1.9 FAD dependent oxidoreductase compare
Psyr_4830 -0.8 -1.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3695 -0.8 -5.1 RelA/SpoT protein compare
Psyr_3673 -0.8 -0.9 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_0386 -0.8 -2.6 phosphoribosyl-AMP cyclohydrolase compare
Psyr_3290 -0.8 -1.9 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3637 -0.8 -5.6 Glycosyl transferase, family 4 compare
Psyr_3701 -0.8 -1.3 thioredoxin, putative compare
Psyr_4424 -0.8 -3.9 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_2887 -0.8 -1.3 Endoribonuclease L-PSP compare
Psyr_3581 -0.8 -3.6 ribosomal large subunit pseudouridine synthase B compare
Psyr_4133 -0.8 -4.4 histidinol dehydrogenase compare
Psyr_1780 -0.8 -1.5 transcriptional regulator, TetR family compare
Psyr_0920 -0.8 -6.6 Glycosyl transferase, group 1 compare
Psyr_0914 -0.8 -4.9 Glycosyl transferase, group 1 compare
Psyr_4089 -0.8 -3.7 PAS compare
Psyr_2521 -0.8 -2.1 conserved hypothetical protein compare
Psyr_4622 -0.8 -2.6 Nucleotidyl transferase compare
Psyr_2137 -0.8 -1.1 molybdopterin molybdochelatase compare
Psyr_3184 -0.8 -2.1 ATP-dependent Clp protease adaptor protein ClpS compare
Psyr_0549 -0.8 -0.9 Metallophosphoesterase compare
Psyr_2807 -0.8 -1.1 NinB compare
Psyr_4598 -0.8 -2.5 lipoprotein, putative compare
Psyr_2933 -0.8 -2.2 transcriptional regulator, TetR family compare
Psyr_3604 -0.8 -2.2 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_0724 -0.7 -1.3 conserved hypothetical protein compare
Psyr_2594 -0.7 -0.8 unknown conserved protein in bacilli compare
Psyr_3425 -0.7 -1.6 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_1864 -0.7 -2.8 spermidine synthase compare
Psyr_3357 -0.7 -1.9 transcriptional regulator, LysR family compare
Psyr_0571 -0.7 -2.2 tRNA isopentenyltransferase compare
Psyr_2280 -0.7 -2.0 Alkanesulfonate monooxygenase compare
Psyr_4808 -0.7 -0.9 conserved hypothetical protein compare
Psyr_2574 -0.7 -4.0 quinoprotein glucose dehydrogenase compare
Psyr_1104 -0.7 -2.1 Heme oxygenase compare
Psyr_2854 -0.7 -2.5 conserved hypothetical protein compare
Psyr_1024 -0.7 -2.0 Flavodoxin/nitric oxide synthase compare
Psyr_3636 -0.7 -4.9 Polysaccharide biosynthesis protein CapD compare
Psyr_2150 -0.7 -2.1 protein of unknown function DUF903 compare
Psyr_3395 -0.7 -2.6 FlhB domain protein compare
Psyr_1783 -0.7 -2.2 CDS compare
Psyr_0916 -0.7 -4.5 GDP-mannose 4,6-dehydratase compare
Psyr_1458 -0.7 -1.5 hypothetical protein compare
Psyr_0219 -0.7 -4.6 phosphomannomutase compare
Psyr_3282 -0.7 -3.0 transcriptional regulator, TetR family compare
Psyr_2180 -0.7 -2.4 transcriptional regulator, LysR family compare
Psyr_4860 -0.7 -0.9 Integrase, catalytic region compare
Psyr_2636 -0.7 -1.7 TspO/MBR-related protein compare
Psyr_1816 -0.7 -2.3 transcriptional regulator, GntR family compare
Psyr_2088 -0.7 -1.3 2-methylaconitate cis-trans isomerase compare
Psyr_2342 -0.7 -2.6 CBS:Transporter-associated region:Integral membrane protein TerC compare
Psyr_1980 -0.7 -1.8 Heat shock protein Hsp20 compare
Psyr_4465 -0.7 -1.4 conserved domain protein compare
Psyr_2546 -0.7 -2.2 DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump compare
Psyr_2211 -0.7 -1.2 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_0407 -0.7 -2.8 type II and III secretion system protein:NolW-like protein:NolW-like protein compare
Psyr_3620 -0.7 -1.0 hypothetical protein compare
Psyr_3547 -0.7 -2.7 transcriptional regulator, TetR family compare
Psyr_0132 -0.7 -1.4 conserved hypothetical protein compare
Psyr_2464 -0.7 -3.1 methionine synthase (B12-dependent) compare
Psyr_2311 -0.7 -1.9 conserved hypothetical protein compare
Psyr_1889 -0.7 -2.7 type III effector HopH1 compare
Psyr_3791 -0.7 -1.3 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_0282 -0.7 -2.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3640 -0.7 -1.9 conserved hypothetical protein compare
Psyr_4025 -0.7 -1.8 ATPase compare
Psyr_0694 -0.7 -2.4 ABC transporter compare
Psyr_0262 -0.7 -2.5 Transport-associated protein compare
Psyr_1268 -0.7 -2.8 extracellular solute-binding protein, family 3:SLT compare
Psyr_4278 -0.7 -0.9 regulatory protein, LuxR compare
Psyr_2528 -0.7 -2.0 Polysaccharide deacetylase compare
Psyr_2921 -0.6 -1.5 ADP-ribosylglycohydrolase compare
Psyr_1227 -0.6 -1.8 Queuosine biosynthesis protein compare
Psyr_0303 -0.6 -1.7 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_3377 -0.6 -1.5 transcriptional regulator, MarR family compare
Psyr_2420 -0.6 -2.5 conserved hypothetical protein compare
Psyr_2538 -0.6 -0.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3199 -0.6 -1.2 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_0579 -0.6 -4.1 RNAse R compare
Psyr_0574 -0.6 -2.2 protease FtsH subunit HflK compare
Psyr_1269 -0.6 -2.3 phosphoribosylformylglycinamidine synthase compare
Psyr_4455 -0.6 -1.1 conserved hypothetical protein compare
Psyr_2942 -0.6 -1.7 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_1594 -0.6 -1.5 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_5065 -0.6 -3.4 ATP-dependent DNA helicase UvrD compare
Psyr_0169 -0.6 -2.6 Hsp33 protein compare
Psyr_4908 -0.6 -2.1 conserved hypothetical protein compare
Psyr_5030 -0.6 -2.1 chorismate lyase compare
Psyr_3312 -0.6 -1.8 transcriptional regulator, LysR family compare
Psyr_2769 -0.6 -1.9 conserved hypothetical protein compare
Psyr_0528 -0.6 -1.5 Carbamoyltransferase compare
Psyr_0378 -0.6 -4.1 Glycosyl transferase, family 2 compare
Psyr_4660 -0.6 -1.9 Formate/nitrite transporter compare
Psyr_0393 -0.6 -2.3 Protein of unknown function DUF971 compare
Psyr_4627 -0.6 -1.1 dimethyladenosine transferase compare
Psyr_3904 -0.6 -3.3 Major intrinsic protein compare
Psyr_1859 -0.6 -1.9 conserved hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Diallyl sulfide across organisms