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Experiment set9IT051 for
Sinorhizobium meliloti 1021
Compare to:
Go
LB
200 most important genes:
gene
name
fitness
t score
description
SMc00987
-3.7
-2.5
hypothetical protein
compare
SMc02425
-3.5
-4.8
transcriptional regulator
compare
SMc03124
-3.3
-2.3
periplasmic binding ABC transporter protein
compare
SMc03100
-3.2
-2.1
hypothetical protein
compare
SMc01360
-2.9
-2.7
aspartate carbamoyltransferase catalytic subunit
compare
SMc02683
-2.8
-2.6
hypothetical protein
compare
SMc00013
-2.7
-2.4
cytochrome C oxidase subunit III transmembrane protein
compare
SMc02858
-2.6
-1.0
chaperone protein DnaJ
compare
SMc01206
-2.5
-1.9
queuine tRNA-ribosyltransferase
compare
SMc01242
-2.4
-2.4
signal peptide protein
compare
SMc01568
-2.4
-1.2
hypothetical protein
compare
SMc03128
-2.4
-3.6
ABC transporter permease
compare
SMc00963
-2.3
-2.2
hypothetical protein
compare
SMc00876
-2.2
-4.2
ATP-binding MRP protein
compare
SMc00189
-2.2
-4.3
cytochrome C1 protein
compare
SMc00073
-2.2
-1.4
hypothetical protein
compare
SMc00914
-2.1
-2.8
oxidoreductase
compare
SMc02778
-2.1
-1.7
hydroxyacid aldolase
compare
SMc01471
-2.0
-2.9
cytochrome C oxidase assembly factor transmembrane protein
compare
SMc02115
-2.0
-0.7
hypothetical protein
compare
SMc00295
-2.0
-1.5
hypothetical protein
compare
SMc00451
-2.0
-6.8
processing protease
compare
SMc01207
-2.0
-2.2
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
compare
SMc04121
-1.9
-1.9
uracil phosphoribosyltransferase
compare
SMc02856
-1.9
-8.8
penicillin-binding protein
compare
SMc03229
-1.9
-2.0
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
compare
SMc00450
-1.9
-1.2
protoheme IX farnesyltransferase
compare
SMc01280
-1.8
-2.3
protease
compare
SMc00760
-1.8
-4.0
recombinase A
compare
SMc02077
-1.8
-2.9
exodeoxyribonuclease III protein
compare
SMc02245
-1.8
-4.1
dihydroorotate dehydrogenase 2
compare
SMc01877
-1.8
-4.3
DNA repair protein
compare
SMc02246
-1.8
-0.9
hypothetical protein
compare
SMa1765
-1.7
-2.1
hypothetical protein
compare
SMc01472
-1.7
-1.5
50S ribosomal protein L11 methyltransferase
compare
SMc02866
-1.7
-3.7
transcriptional regulator
compare
SMc01845
-1.7
-1.9
transglycosylase transmembrane protein
compare
SMc02165
-1.7
-6.4
orotate phosphoribosyltransferase
compare
SMc01880
-1.7
-1.6
pantoate--beta-alanine ligase
compare
SMc00302
-1.7
-1.6
hypothetical protein
compare
SMc01220
-1.6
-4.6
lipopolysaccharide core biosynthesis glycosyl transferase
compare
SMc02166
-1.6
-8.7
dihydroorotase
compare
SMc02897
-1.6
-2.1
cytochrome C transmembrane protein
compare
SMc00928
-1.6
-1.2
signal peptide protein
compare
SMc01800
-1.6
-0.8
cytochrome C oxidase assembly transmembrane protein
compare
SMc00427
-1.5
-1.4
peptide chain release factor RF-3 protein
compare
SMc02850
-1.5
-1.4
DNA polymerase I
compare
SMc01361
-1.5
-3.0
dihydroorotase
compare
SM
_b20758
-1.5
-2.4
ArsR family transcriptional regulator
compare
SMc03878
-1.5
-2.4
acetoacetyl-CoA reductase
compare
SM
_b21175
-1.5
-3.4
phosphate uptake ABC transporter permease
compare
SMc04024
-1.4
-5.6
membrane-bound lytic murein transglycosylase
compare
SMc03978
-1.4
-1.4
transketolase
compare
SMc00188
-1.4
-5.8
cytochrome B transmembrane protein
compare
SMc00461
-1.4
-1.7
deoxyuridine 5'-triphosphate nucleotidohydrolase
compare
SMc02894
-1.4
-2.0
hypothetical protein
compare
SMc02121
-1.4
-1.7
ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component
(from data)
compare
SMc02867
-1.4
-2.0
multidrug-efflux system transmembrane protein
compare
SMc02055
-1.4
-1.9
phytoene synthase
compare
SMc04385
-1.3
-4.6
L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31)
(from data)
compare
SMc03127
-1.3
-1.2
ABC transporter permease
compare
SMc00010
-1.3
-1.2
cytochrome C oxidase polypeptide I transmembrane protein
compare
SMc03069
-1.3
-2.1
6-phosphogluconolactonase
compare
SMc02495
-1.3
-1.2
translaldolase
compare
SM
_b20452
-1.3
-2.8
hypothetical protein
compare
SMa2215
-1.2
-2.8
GntR family transcriptional regulator
compare
SMc02232
-1.2
-1.6
hypothetical protein
compare
SMc01258
-1.2
-4.5
hypothetical protein
compare
SMc02149
-1.2
-1.3
hypothetical protein
compare
SM
_b21174
-1.2
-3.1
phosphate uptake ABC transporter permease
compare
SM
_b20294
-1.2
-1.5
transcriptional regulator NanR
compare
SMc02868
-1.2
-3.3
multidrug efflux system protein
compare
SMc03850
-1.2
-0.6
heme exporter D (cytochrome C-type biogenesis protein) transmembrane
compare
SM
_b21479
-1.2
-1.7
hypothetical protein
compare
SMc02753
-1.1
-0.7
PTS system transporter subunit IIA
compare
SMc01019
-1.1
-4.9
hypothetical protein
compare
SMc00169
-1.1
-8.5
malic enzyme
compare
SMc00815
-1.1
-0.7
inosine 5'-monophosphate dehydrogenase
compare
SM
_b20258
-1.1
-2.5
transcriptional regulator
compare
SMc04003
-1.1
-1.3
50S ribosomal protein L36
compare
SMc00355
-1.1
-2.1
hypothetical protein
compare
SMc04085
-1.1
-3.5
hypothetical protein
compare
SMc02755
-1.0
-4.0
S-adenosyl-L-homocysteine hydrolase
compare
SMa1630
-1.0
-1.6
hypothetical protein
compare
SMc01012
-1.0
-1.5
hypothetical protein
compare
SMc01850
-1.0
-1.9
hypothetical protein
compare
SM
_b21176
-1.0
-3.8
phosphate uptake ABC transporter substrate-binding protein precursor
compare
SMc02569
-1.0
-3.5
imidazole glycerol phosphate synthase subunit HisF
compare
SMc02641
-1.0
-1.6
UDP-glucose 6-dehydrogenase
compare
SMc01208
-1.0
-1.9
peptidyl-prolyl cis-trans isomerase B protein
compare
SMc00602
-1.0
-3.3
excinuclease ABC subunit C
compare
SMc00970
-1.0
-1.3
exodeoxyribonuclease VII small subunit
compare
SMc03899
-1.0
-0.9
hypothetical protein
compare
SMc03763
-1.0
-0.9
cytosine-specific methyltransferase
compare
SMc01885
-1.0
-5.1
aminopeptidase P protein
compare
SMa1118
-1.0
-1.6
HspC2 heat shock protein
compare
SM
_b20307
-1.0
-1.0
dihydroxyacetone kinase
compare
SMc01509
-0.9
-1.7
hypothetical protein
compare
SMc01235
-0.9
-6.1
excinuclease ABC subunit A
compare
SMc00009
-0.9
-3.8
cytochrome C oxidase subunit II protein
compare
SMc04391
-0.9
-1.6
3-ketoacyl-ACP reductase
compare
SMc00072
-0.9
-1.3
peroxiredoxin protein
compare
SMc01782
-0.9
-4.2
hypothetical protein
compare
SMc00566
-0.9
-2.2
hypothetical protein
compare
SMc00187
-0.9
-2.1
ubiquinol-cytochrome C reductase iron-sulfur subunit protein
compare
SMa5033
-0.9
-1.0
hypothetical protein
compare
SMc00973
-0.9
-1.9
hypothetical protein
compare
SMc01461
-0.9
-3.1
DNA helicase II protein
compare
SMc00711
-0.9
-2.5
cyclohexadienyl dehydrogenase
compare
SMc02504
-0.9
-3.1
transcriptional regulator
compare
SMc02640
-0.9
-2.6
UDP-glucuronic acid epimerase
compare
SM
_b20086
-0.9
-0.9
hypothetical protein
compare
SMc02050
-0.9
-2.3
trigger factor
compare
SM
_b21035
-0.9
-3.4
hypothetical protein
compare
SMc02844
-0.9
-1.3
transcriptional regulator
compare
SMc00419
-0.9
-1.1
glutathione synthetase
compare
SMc01342
-0.9
-2.5
hypothetical protein
compare
SMc00143
-0.9
-1.6
molybdopterin-guanine dinucleotide biosynthesis protein MobA
compare
SMc00492
-0.9
-0.5
hypothetical protein
compare
SMc00555
-0.8
-1.1
colicin V production transmembrane protein
compare
SMc02484
-0.8
-2.7
amino acid efflux transmembrane protein
compare
SMc00006
-0.8
-1.9
hypothetical protein
compare
SMc04174
-0.8
-1.0
signal peptide protein
compare
SMc01655
-0.8
-2.4
ABC transporter permease
compare
SMc04383
-0.8
-2.5
putative hydrolase, required for lysine catabolism
(from data)
compare
SMc00576
-0.8
-2.5
hypothetical protein
compare
SMc02313
-0.8
-3.0
hypothetical protein
compare
SMc01579
-0.8
-1.1
hypothetical protein
compare
SMc01931
-0.8
-2.1
hypothetical protein
compare
SMa1779
-0.8
-1.4
hypothetical protein
compare
SMa1838
-0.8
-2.3
dehydrogenase
compare
SMc02758
-0.8
-2.1
nucleotidyl transferase
compare
SMc00412
-0.8
-2.0
orotidine 5'-phosphate decarboxylase
compare
SMc02582
-0.8
-1.8
hypothetical protein
compare
SMc02909
-0.8
-0.9
transglycosylase transmembrane protein
compare
SMc00229
-0.7
-3.0
hypothetical protein
compare
SMc01929
-0.7
-1.5
hypothetical protein
compare
SMc03993
-0.7
-2.2
hypothetical protein
compare
SM
_b20880
-0.7
-3.5
ATP-dependent RNA helicase
compare
SMa2253
-0.7
-0.8
hypothetical protein
compare
SMc02250
-0.7
-1.8
large-conductance mechanosensitive channel
compare
SMc01842
-0.7
-1.5
methyltransferase transcription regulator protein
compare
SMc04224
-0.7
-1.2
hypothetical protein
compare
SMc00554
-0.7
-3.3
amidophosphoribosyltransferase
compare
SMc02171
-0.7
-1.6
periplasmic binding ABC transporter protein
compare
SMc03030
-0.7
-2.8
flagellar basal body rod protein FlgG
compare
SMc04090
-0.7
-1.8
sun protein
compare
SMc00230
-0.7
-1.9
hypothetical protein
compare
SMc01127
-0.7
-2.2
hypothetical protein
compare
SMc02812
-0.7
-1.5
hypothetical protein
compare
SMc00557
-0.7
-2.5
alanine racemase
compare
SMc02505
-0.7
-0.7
hypothetical protein
compare
SMc03890
-0.7
-2.3
transcriptional regulator
compare
SMc02485
-0.7
-1.1
signal peptide protein
compare
SMc00667
-0.7
-1.5
hypothetical protein
compare
SMc02451
-0.7
-0.7
hypothetical protein
compare
SM
_b20904
-0.7
-2.2
sugar uptake ABC transporter ATP-binding protein
compare
SMc03839
-0.7
-1.0
hypothetical protein
compare
SMc00404
-0.7
-0.8
hypothetical protein
compare
SMc02503
-0.7
-3.6
hypothetical protein
compare
SMc03046
-0.7
-2.5
transcriptional regulator
compare
SMc01187
-0.7
-1.0
rare lipoprotein A
compare
SM
_b21454
-0.7
-1.3
hypothetical protein
compare
SMc03795
-0.7
-0.9
isopropylmalate isomerase small subunit
compare
SMc03924
-0.7
-3.6
glycogen synthase
compare
SMc00239
-0.7
-0.6
hypothetical protein
compare
SMc03288
-0.7
-3.0
hypothetical protein
compare
SMc04432
-0.7
-2.0
hypothetical protein
compare
SMc02201
-0.7
-1.6
hypothetical protein
compare
SMc02822
-0.7
-2.0
hypothetical protein
compare
SMc04384
-0.7
-2.5
(R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39)
(from data)
compare
SMa2289
-0.6
-0.9
hypothetical protein
compare
SMc01438
-0.6
-2.6
protease precursor signal peptide protein
compare
SMc00514
-0.6
-1.7
monooxygenase
compare
SMc00085
-0.6
-2.4
cytochrome oxidase complex biogenesis factor transmembrane protein
compare
SMc02039
-0.6
-2.3
oxidoreductase
compare
SMc01972
-0.6
-4.2
oxidoreductase
compare
SMc02102
-0.6
-1.4
hypothetical protein
compare
SMc03746
-0.6
-1.4
hypothetical protein
compare
SMc02309
-0.6
-2.3
arsenate reductase
compare
SMc02862
-0.6
-2.2
Pit accessory protein
compare
SMa1176
-0.6
-1.4
hypothetical protein
compare
SMc03008
-0.6
-0.7
chemotaxis protein
compare
SMc01515
-0.6
-1.4
hypothetical protein
compare
SMa1002
-0.6
-0.4
hypothetical protein
compare
SM
_b20690
-0.6
-0.9
hypothetical protein
compare
SMc00647
-0.6
-1.5
ribosomal large subunit pseudouridine synthase
compare
SMc03207
-0.6
-2.6
aromatic amino acid degradation protein
compare
SMc04213
-0.6
-1.1
diacylglycerol kinase
compare
SMc00806
-0.6
-1.6
hypothetical protein
compare
SMc01183
-0.6
-0.5
LexA repressor
compare
SMa0846
-0.6
-0.9
transposase, fragment
compare
SMc02227
-0.6
-1.9
fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase
compare
SMc01713
-0.6
-1.8
hypothetical protein
compare
SMc01853
-0.6
-2.4
hypothetical protein
compare
SMc04242
-0.6
-0.8
zinc uptake regulation protein
compare
SMc00104
-0.6
-1.4
hypothetical protein
compare
SMa0759
-0.6
-1.9
hypothetical protein
compare
SMc04169
-0.6
-3.8
transcriptional regulator
compare
SMa1442
-0.6
-2.5
GntR family transcriptional regulator
compare
Specific Phenotypes
None in this experiment
For Sinorhizobium meliloti 1021 in lb experiments