Experiment set9IT050 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Chaulmoogric acid 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -5.0 -4.9 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4740 -3.9 -9.8 thiazole-phosphate synthase compare
Psyr_4341 -3.9 -11.2 thiamine-phosphate diphosphorylase compare
Psyr_4340 -3.4 -11.9 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -3.4 -6.5 SirA-like protein compare
Psyr_4203 -3.3 -4.5 SsrA-binding protein compare
Psyr_0034 -3.3 -4.5 tryptophan synthase, beta chain compare
Psyr_4683 -3.2 -5.7 dethiobiotin synthase compare
Psyr_4091 -3.1 -5.2 8-oxo-dGTPase compare
Psyr_4293 -3.0 -9.2 Acyl-CoA thioesterase conserved
Psyr_4687 -2.7 -10.2 biotin synthase compare
Psyr_1613 -2.5 -6.9 septum site-determining protein MinC compare
Psyr_1373 -2.4 -3.9 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0475 -2.4 -4.4 Protein of unknown function YGGT compare
Psyr_4684 -2.3 -4.7 biotin synthesis protein BioC compare
Psyr_0383 -2.0 -1.3 Twin-arginine translocation protein TatB compare
Psyr_0835 -2.0 -6.2 transcriptional regulator, TraR/DksA family compare
Psyr_4519 -2.0 -8.1 General substrate transporter:Major facilitator superfamily compare
Psyr_4686 -1.9 -6.0 8-amino-7-oxononanoate synthase compare
Psyr_3193 -1.9 -3.1 Transcription factor jumonji, jmjC compare
Psyr_2980 -1.9 -3.8 UDP-glucose pyrophosphorylase compare
Psyr_0454 -1.9 -6.9 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0033 -1.8 -3.2 tryptophan synthase, alpha chain compare
Psyr_2360 -1.8 -3.1 CBS compare
Psyr_0215 -1.7 -9.1 Exodeoxyribonuclease III xth compare
Psyr_4566 -1.6 -8.5 Peptidase M23B compare
Psyr_3208 -1.6 -3.1 NADH dehydrogenase subunit M compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_0575 -1.5 -3.0 protease FtsH subunit HflC compare
Psyr_3419 -1.5 -4.3 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_1747 -1.5 -3.8 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3013 -1.5 -1.4 magnesium chelatase subunit ChlD compare
Psyr_0255 -1.5 -2.7 glutamate-cysteine ligase compare
Psyr_4194 -1.4 -3.7 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_5133 -1.4 -4.3 tRNA modification GTPase trmE compare
Psyr_1556 -1.4 -2.4 hypothetical protein compare
Psyr_2411 -1.4 -2.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_0303 -1.4 -4.0 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_0849 -1.3 -7.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4151 -1.3 -1.6 Phosphocarrier HPr protein compare
Psyr_4512 -1.3 -6.9 putative phage-related protein compare
Psyr_3202 -1.3 -2.0 NADH dehydrogenase subunit G compare
Psyr_4362 -1.2 -2.5 Rare lipoprotein A compare
Psyr_2897 -1.2 -5.0 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2590 -1.2 -2.4 Periplasmic binding protein compare
Psyr_2143 -1.2 -2.3 delta1-piperideine 2-carboxylate reductase compare
Psyr_3755 -1.2 -1.7 conserved hypothetical protein compare
Psyr_2223 -1.2 -1.3 sarcosine oxidase, delta subunit compare
Psyr_1791 -1.2 -3.1 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_2531 -1.2 -2.7 transcriptional regulator, LysR family compare
Psyr_4158 -1.1 -6.2 conserved hypothetical protein compare
Psyr_1419 -1.1 -3.6 preQ(0) biosynthesis protein QueC compare
Psyr_0524 -1.1 -2.2 Lipopolysaccharide kinase compare
Psyr_0529 -1.1 -3.5 Glycosyl transferase, group 1 compare
Psyr_5132 -1.1 -2.5 Glucose-inhibited division protein A subfamily compare
Psyr_4051 -1.1 -2.1 transcriptional regulator, ArsR family compare
Psyr_3698 -1.1 -5.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0350 -1.1 -2.3 ABC transporter compare
Psyr_3459 -1.1 -2.3 Helix-turn-helix, Fis-type compare
Psyr_0549 -1.1 -2.1 Metallophosphoesterase compare
Psyr_2592 -1.1 -3.6 transport system permease protein compare
Psyr_2854 -1.1 -3.4 conserved hypothetical protein compare
Psyr_2386 -1.1 -2.8 hypothetical protein compare
Psyr_0571 -1.1 -3.0 tRNA isopentenyltransferase compare
Psyr_2095 -1.1 -3.5 Conserved TM helix compare
Psyr_3581 -1.0 -4.3 ribosomal large subunit pseudouridine synthase B compare
Psyr_1408 -1.0 -2.2 Holliday junction endonuclease RuvC compare
Psyr_3055 -1.0 -1.3 Aminoglycoside phosphotransferase compare
Psyr_2144 -1.0 -1.4 conserved hypothetical protein compare
Psyr_0574 -1.0 -4.2 protease FtsH subunit HflK compare
Psyr_0917 -1.0 -7.1 ABC-2 compare
Psyr_3162 -1.0 -2.3 Metalloprotease inhibitor/calysin compare
Psyr_2344 -1.0 -3.0 CDS compare
Psyr_2285 -1.0 -1.4 Twin-arginine translocation pathway signal compare
Psyr_2591 -1.0 -3.7 transport system permease protein compare
Psyr_0784 -1.0 -2.3 CheW-like protein compare
Psyr_2855 -1.0 -3.2 methionine synthase (B12-independent) compare
Psyr_4093 -0.9 -4.1 glutamate N-acetyltransferase compare
Psyr_0576 -0.9 -1.9 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_0169 -0.9 -2.6 Hsp33 protein compare
Psyr_0437 -0.9 -2.1 acyl carrier protein, putative compare
Psyr_1910 -0.9 -2.9 VacJ-like lipoprotein compare
Psyr_1614 -0.9 -1.0 lipid A biosynthesis acyltransferase compare
Psyr_1930 -0.9 -2.4 hypothetical protein compare
Psyr_3904 -0.9 -4.4 Major intrinsic protein compare
Psyr_2593 -0.9 -2.1 ABC transporter compare
Psyr_3425 -0.9 -2.6 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_4580 -0.9 -2.5 anthranilate phosphoribosyltransferase compare
Psyr_0231 -0.9 -1.8 conserved hypothetical protein compare
Psyr_0199 -0.9 -2.1 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_1947 -0.9 -2.6 MbtH-like protein compare
Psyr_1499 -0.9 -2.0 Protein of unknown function DUF compare
Psyr_4622 -0.9 -2.6 Nucleotidyl transferase compare
Psyr_0579 -0.9 -5.7 RNAse R compare
Psyr_3374 -0.9 -2.9 Heavy metal response regulator compare
Psyr_1953 -0.9 -1.6 conserved hypothetical protein compare
Psyr_5067 -0.9 -4.0 conserved hypothetical protein compare
Psyr_0826 -0.9 -4.5 glucose-6-phosphate isomerase compare
Psyr_2347 -0.9 -2.7 hypothetical protein compare
Psyr_3257 -0.9 -2.5 multisubunit potassium/proton antiporter, PhaG subunit compare
Psyr_0918 -0.9 -6.4 ABC transporter compare
Psyr_4278 -0.9 -1.9 regulatory protein, LuxR compare
Psyr_0831 -0.9 -2.2 Two-component response regulator CbrB compare
Psyr_1405 -0.8 -2.8 hypothetical protein compare
Psyr_4627 -0.8 -1.8 dimethyladenosine transferase compare
Psyr_2259 -0.8 -2.7 Beta-lactamase-like protein compare
Psyr_2085 -0.8 -3.2 methylisocitrate lyase compare
Psyr_0827 -0.8 -3.2 pantothenate synthetase compare
Psyr_1378 -0.8 -1.8 RecA protein compare
Psyr_2582 -0.8 -4.7 TonB-dependent siderophore receptor compare
Psyr_0372 -0.8 -1.8 CDS compare
Psyr_1765 -0.8 -2.5 GCN5-related N-acetyltransferase compare
Psyr_4967 -0.8 -2.5 conserved hypothetical protein compare
Psyr_4788 -0.8 -1.7 lipoprotein, putative compare
Psyr_3926 -0.8 -2.3 transcriptional regulator, PadR family compare
Psyr_3676 -0.8 -3.2 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_1198 -0.8 -1.7 type III secretion protein HrpF compare
Psyr_0916 -0.8 -5.2 GDP-mannose 4,6-dehydratase compare
Psyr_4138 -0.8 -1.7 Toluene tolerance compare
Psyr_2566 -0.8 -1.7 dihydroxyacetone kinase DhaK subunit compare
Psyr_4830 -0.8 -1.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1576 -0.8 -1.8 Glutamine amidotransferase, class-II compare
Psyr_3462 -0.8 -2.2 conserved hypothetical protein compare
Psyr_0817 -0.8 -2.9 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_0947 -0.8 -3.0 TPR repeat protein:TPR repeat protein compare
Psyr_1404 -0.8 -4.4 Ferritin and Dps compare
Psyr_0838 -0.8 -1.3 Rieske [2Fe-2S] region compare
Psyr_3600 -0.8 -1.4 transcriptional regulator, LysR family compare
Psyr_2311 -0.8 -3.1 conserved hypothetical protein compare
Psyr_3198 -0.8 -1.3 NADH dehydrogenase subunit B compare
Psyr_2330 -0.8 -2.2 FAD dependent oxidoreductase compare
Psyr_3776 -0.7 -2.9 Cytosine deaminase compare
Psyr_1087 -0.7 -2.6 CDS compare
Psyr_3644 -0.7 -1.5 prephenate dehydrogenase compare
Psyr_0914 -0.7 -4.6 Glycosyl transferase, group 1 compare
Psyr_1663 -0.7 -2.2 phosphoribosylanthranilate isomerase compare
Psyr_3791 -0.7 -2.4 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_3290 -0.7 -2.1 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3808 -0.7 -0.8 hypothetical protein compare
Psyr_3842 -0.7 -2.6 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_3358 -0.7 -1.8 transmembrane pair compare
Psyr_1268 -0.7 -3.4 extracellular solute-binding protein, family 3:SLT compare
Psyr_4843 -0.7 -2.5 NUDIX hydrolase compare
Psyr_3701 -0.7 -1.1 thioredoxin, putative compare
Psyr_2117 -0.7 -1.4 conserved hypothetical protein compare
Psyr_3258 -0.7 -2.0 conserved hypothetical protein compare
Psyr_0531 -0.7 -2.2 LmbE-like protein compare
Psyr_0436 -0.7 -1.5 Phosphopantetheine-binding protein compare
Psyr_4908 -0.7 -2.1 conserved hypothetical protein compare
Psyr_4408 -0.7 -3.6 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4894 -0.7 -3.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_2528 -0.7 -2.7 Polysaccharide deacetylase compare
Psyr_0487 -0.7 -1.4 glutathione synthase compare
Psyr_1372 -0.7 -2.8 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_2604 -0.7 -2.4 conserved hypothetical protein; putative membrane protein compare
Psyr_4141 -0.7 -2.5 ABC transporter compare
Psyr_3241 -0.7 -2.2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_2758 -0.7 -2.0 ABC transporter:TOBE compare
Psyr_1459 -0.7 -2.8 DNA polymerase, beta-like region compare
Psyr_4621 -0.7 -3.0 Heat shock protein DnaJ, N-terminal compare
Psyr_1163 -0.7 -1.8 Isochorismatase hydrolase compare
Psyr_5064 -0.7 -2.1 transcriptional regulator, RpiR family compare
Psyr_3473 -0.7 -1.1 Flagellar P-ring protein compare
Psyr_3427 -0.7 -1.8 conserved hypothetical protein compare
Psyr_4656 -0.7 -3.5 hypothetical protein compare
Psyr_4089 -0.7 -3.0 PAS compare
Psyr_1095 -0.7 -2.0 Glycine cleavage system T protein compare
Psyr_0535 -0.7 -1.7 toluene tolerance protein, putative compare
Psyr_1528 -0.7 -1.6 Arc-like DNA binding protein compare
Psyr_2088 -0.7 -1.3 2-methylaconitate cis-trans isomerase compare
Psyr_0385 -0.7 -1.7 phosphoribosyl-ATP pyrophosphatase compare
Psyr_2668 -0.7 -1.8 Helix-turn-helix, Fis-type compare
Psyr_5102 -0.6 -1.0 ABC transporter compare
Psyr_2872 -0.6 -1.0 hypothetical protein compare
Psyr_3674 -0.6 -1.9 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_1948 -0.6 -2.2 ABC transporter, periplasmic substrate-binding protein, putative compare
Psyr_3103 -0.6 -2.6 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_2551 -0.6 -1.8 acetylornithine aminotransferase apoenzyme compare
Psyr_4465 -0.6 -1.4 conserved domain protein compare
Psyr_3805 -0.6 -1.3 hypothetical protein compare
Psyr_5050 -0.6 -1.5 transcriptional regulator, LysR family compare
Psyr_1729 -0.6 -2.6 transcriptional regulator, MarR family compare
Psyr_2266 -0.6 -1.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2398 -0.6 -1.5 ABC transporter compare
Psyr_0559 -0.6 -2.8 thiosulfate sulfurtransferase compare
Psyr_3862 -0.6 -1.9 conserved hypothetical protein compare
Psyr_3020 -0.6 -1.4 precorrin-4 C11-methyltransferase compare
Psyr_4418 -0.6 -1.3 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4015 -0.6 -0.9 conserved domain protein compare
Psyr_4896 -0.6 -2.2 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_4380 -0.6 -1.0 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_4752 -0.6 -2.3 Insulinase-like:Peptidase M16, C-terminal compare
Psyr_0936 -0.6 -4.4 Glycosyl transferase, group 1 compare
Psyr_3616 -0.6 -3.3 Heat shock protein, Metallo peptidase, MEROPS family M48B compare
Psyr_1864 -0.6 -2.4 spermidine synthase compare
Psyr_3357 -0.6 -1.5 transcriptional regulator, LysR family compare
Psyr_4460 -0.6 -0.9 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1733 -0.6 -1.3 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_1944 -0.6 -1.2 Thioesterase compare
Psyr_2419 -0.6 -1.7 Protein of unknown function DUF480 compare


Specific Phenotypes

For 1 genes in this experiment

For stress Chaulmoogric acid in Pseudomonas syringae pv. syringae B728a

For stress Chaulmoogric acid across organisms