Experiment set9IT049 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads

200 most important genes:

  gene name fitness t score description  
BWI76_RS00400 -5.0 -3.3 glutamine synthetase compare
BWI76_RS02530 -4.8 -3.3 tRNA dimethylallyltransferase compare
BWI76_RS05200 -4.5 -4.4 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS23240 -4.5 -4.3 exonuclease V subunit gamma compare
BWI76_RS04465 -4.3 -3.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS23920 -3.9 -6.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09645 -3.7 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS04160 -3.5 -8.6 phosphoserine phosphatase compare
BWI76_RS01210 -3.3 -2.5 tyrosine recombinase XerC compare
BWI76_RS09755 -3.3 -8.7 phosphoserine transaminase compare
BWI76_RS20435 -3.1 -2.4 chorismate synthase compare
BWI76_RS04470 -3.1 -8.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS02995 -3.1 -11.7 aspartate carbamoyltransferase compare
BWI76_RS09760 -3.1 -7.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS11965 -3.0 -4.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04305 -2.9 -1.9 molecular chaperone DnaJ compare
BWI76_RS10990 -2.9 -4.6 dihydroorotase compare
BWI76_RS01800 -2.8 -6.3 glucose-6-phosphate isomerase compare
BWI76_RS05015 -2.8 -5.0 transcriptional regulator compare
BWI76_RS20965 -2.8 -5.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS05450 -2.8 -2.3 ribonuclease HI compare
BWI76_RS27385 -2.7 -7.3 orotate phosphoribosyltransferase compare
BWI76_RS00345 -2.7 -4.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS09910 -2.7 -16.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS22690 -2.7 -5.0 adenylyl-sulfate kinase compare
BWI76_RS20650 -2.7 -4.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS26085 -2.7 -2.2 3-dehydroquinate synthase compare
BWI76_RS18870 -2.7 -2.0 protein NifZ compare
BWI76_RS01610 -2.6 -12.2 phosphoribosylamine--glycine ligase compare
BWI76_RS20355 -2.6 -5.3 colicin V production protein compare
BWI76_RS07070 -2.6 -7.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20350 -2.6 -8.2 amidophosphoribosyltransferase compare
BWI76_RS23365 -2.6 -5.3 LysR family transcriptional regulator compare
BWI76_RS01615 -2.5 -10.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04510 -2.5 -2.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS00390 -2.4 -6.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS21265 -2.4 -13.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04645 -2.4 -6.8 3-dehydroquinase compare
BWI76_RS27390 -2.3 -4.1 ribonuclease PH compare
BWI76_RS25320 -2.3 -11.4 glutamate synthase compare
BWI76_RS00385 -2.3 -6.9 nitrogen assimilation regulatory protein compare
BWI76_RS22755 -2.2 -6.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23360 -2.2 -5.3 diaminopimelate decarboxylase compare
BWI76_RS21475 -2.1 -9.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS20895 -2.0 -3.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS08180 -2.0 -6.9 asparagine synthase B compare
BWI76_RS01350 -1.9 -1.6 NAD(P)H-flavin reductase compare
BWI76_RS18925 -1.9 -5.0 histidinol dehydrogenase compare
BWI76_RS09660 -1.9 -2.1 DNA translocase FtsK compare
BWI76_RS23220 -1.8 -6.8 amino-acid N-acetyltransferase compare
BWI76_RS00835 -1.8 -11.2 phosphoenolpyruvate carboxylase compare
BWI76_RS18385 -1.8 -2.0 hypothetical protein compare
BWI76_RS22765 -1.8 -8.5 sulfite reductase subunit alpha compare
BWI76_RS25315 -1.8 -9.6 glutamate synthase large subunit compare
BWI76_RS07065 -1.8 -6.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18920 -1.8 -4.2 ATP phosphoribosyltransferase compare
BWI76_RS00990 -1.7 -7.9 ketol-acid reductoisomerase compare
BWI76_RS18950 -1.7 -6.6 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS24885 -1.7 -1.3 PTS galactitol transporter subunit IIB compare
BWI76_RS05840 -1.7 -7.2 glutamate 5-kinase compare
BWI76_RS06530 -1.7 -3.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS18940 -1.6 -6.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00845 -1.6 -7.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS22760 -1.6 -4.3 sulfite reductase subunit beta compare
BWI76_RS23480 -1.6 -9.7 EAL domain-containing protein compare
BWI76_RS00855 -1.6 -8.7 argininosuccinate lyase compare
BWI76_RS23230 -1.6 -2.4 exodeoxyribonuclease V subunit beta compare
BWI76_RS05835 -1.6 -3.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS18935 -1.6 -7.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS25115 -1.5 -7.0 argininosuccinate synthase compare
BWI76_RS26075 -1.5 -2.7 DNA adenine methylase compare
BWI76_RS09735 -1.5 -5.8 formate acetyltransferase compare
BWI76_RS17250 -1.5 -6.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
BWI76_RS00965 -1.4 -1.3 acetolactate synthase 2 small subunit compare
BWI76_RS22805 -1.4 -6.1 GTP diphosphokinase compare
BWI76_RS00180 -1.4 -2.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS04255 -1.4 -5.9 threonine synthase compare
BWI76_RS06525 -1.4 -4.0 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS11440 -1.3 -1.5 hypothetical protein compare
BWI76_RS25335 -1.3 -4.0 stringent starvation protein A compare
BWI76_RS18930 -1.3 -4.3 histidinol-phosphate transaminase compare
BWI76_RS08385 -1.3 -2.3 citrate (Si)-synthase compare
BWI76_RS02410 -1.3 -1.8 EF-P beta-lysylation protein EpmB compare
BWI76_RS06765 -1.3 -2.6 transcriptional regulator compare
BWI76_RS03010 -1.3 -5.8 ornithine carbamoyltransferase compare
BWI76_RS01185 -1.3 -2.4 adenylate cyclase compare
BWI76_RS07725 -1.2 -1.2 iron-enterobactin transporter permease compare
BWI76_RS25285 -1.2 -1.3 HPr family phosphocarrier protein compare
BWI76_RS08535 -1.2 -1.8 translocation protein TolB compare
BWI76_RS00975 -1.2 -4.8 dihydroxy-acid dehydratase compare
BWI76_RS20380 -1.2 -1.4 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS25645 -1.2 -5.1 shikimate dehydrogenase compare
BWI76_RS00850 -1.2 -5.4 acetylglutamate kinase compare
BWI76_RS11840 -1.2 -1.8 tryptophan synthase subunit alpha compare
BWI76_RS16235 -1.2 -4.0 membrane protein compare
BWI76_RS18835 -1.2 -4.3 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
BWI76_RS21370 -1.1 -1.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS27430 -1.1 -0.9 (p)ppGpp synthetase compare
BWI76_RS12470 -1.1 -2.0 thiosulfate sulfurtransferase PspE compare
BWI76_RS18850 -1.1 -5.6 iron-sulfur cluster assembly scaffold protein NifU compare
BWI76_RS04250 -1.1 -3.3 homoserine kinase compare
BWI76_RS18820 -1.1 -3.4 nitrogenase molybdenum-iron protein subunit beta compare
BWI76_RS18805 -1.0 -5.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
BWI76_RS18885 -1.0 -1.5 nitrogen fixation regulatory protein compare
BWI76_RS12090 -1.0 -1.2 HNH endonuclease compare
BWI76_RS00980 -1.0 -6.1 PLP-dependent threonine dehydratase compare
BWI76_RS23885 -1.0 -1.7 2-octaprenylphenol hydroxylase compare
BWI76_RS18895 -1.0 -3.1 nitrogenase cofactor biosynthesis protein NifB compare
BWI76_RS11130 -1.0 -5.1 PTS glucose transporter subunit IIBC compare
BWI76_RS09440 -1.0 -2.3 hypothetical protein compare
BWI76_RS18860 -1.0 -3.9 homocitrate synthase compare
BWI76_RS04245 -1.0 -6.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS15060 -1.0 -2.8 MarR family transcriptional regulator compare
BWI76_RS04675 -0.9 -5.7 3-isopropylmalate dehydrogenase compare
BWI76_RS18875 -0.9 -3.6 nitrogen fixation protein NifM compare
BWI76_RS18890 -0.9 -5.2 nif-specific transcriptional activator NifA compare
BWI76_RS15215 -0.9 -1.0 N-acetyltransferase compare
BWI76_RS13820 -0.9 -2.4 hypothetical protein compare
BWI76_RS06770 -0.9 -5.1 Hha toxicity attenuator compare
BWI76_RS04240 -0.9 -2.0 thr operon leader peptide compare
BWI76_RS06800 -0.9 -1.1 DUF2496 domain-containing protein compare
BWI76_RS01655 -0.9 -3.9 homoserine O-succinyltransferase compare
BWI76_RS25070 -0.8 -1.3 hypothetical protein compare
BWI76_RS18900 -0.8 -2.7 protein NifQ compare
BWI76_RS17975 -0.8 -2.1 tail-specific protease compare
BWI76_RS21465 -0.8 -2.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS05260 -0.8 -1.4 chaperone compare
BWI76_RS26620 -0.8 -1.0 Fe-S biogenesis protein NfuA compare
BWI76_RS18815 -0.8 -1.9 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS11430 -0.8 -1.1 lipoprotein compare
BWI76_RS15835 -0.8 -0.7 hypothetical protein compare
BWI76_RS06240 -0.8 -3.5 branched-chain amino acid transport system 2 carrier protein BrnQ compare
BWI76_RS01385 -0.8 -1.8 potassium transporter compare
BWI76_RS00970 -0.8 -2.2 branched chain amino acid aminotransferase compare
BWI76_RS04680 -0.8 -4.9 2-isopropylmalate synthase compare
BWI76_RS20565 -0.8 -1.3 hypothetical protein compare
BWI76_RS10950 -0.8 -1.8 MFS transporter compare
BWI76_RS19770 -0.8 -1.5 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS17470 -0.8 -1.4 MerR family transcriptional regulator compare
BWI76_RS06405 -0.8 -1.9 2-dehydropantoate 2-reductase compare
BWI76_RS06340 -0.8 -1.0 hypothetical protein compare
BWI76_RS18840 -0.8 -4.5 nitrogenase iron-molybdenum cofactor biosynthesis protein NifN compare
BWI76_RS12870 -0.8 -1.9 putative phytanoyl-CoA dioxygenase compare
BWI76_RS00025 -0.7 -0.7 hypothetical protein compare
BWI76_RS04145 -0.7 -1.8 purine-nucleoside phosphorylase compare
BWI76_RS15035 -0.7 -1.5 metal ABC transporter permease compare
BWI76_RS19685 -0.7 -2.6 lysine transporter compare
BWI76_RS23140 -0.7 -1.6 carboxysome shell protein compare
BWI76_RS18565 -0.7 -1.7 pemk protein compare
BWI76_RS21480 -0.7 -3.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS10835 -0.7 -1.3 hypothetical protein compare
BWI76_RS15830 -0.7 -2.1 hypothetical protein compare
BWI76_RS20640 -0.7 -2.0 cysteine synthase A compare
BWI76_RS00805 -0.7 -2.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS24100 -0.7 -2.8 YggS family pyridoxal phosphate enzyme compare
BWI76_RS11850 -0.7 -5.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS15115 -0.7 -4.1 MFS transporter compare
BWI76_RS24025 -0.7 -3.5 agmatinase compare
BWI76_RS21350 -0.7 -1.7 anti-RNA polymerase sigma factor SigE compare
BWI76_RS22125 -0.7 -1.3 membrane protein compare
BWI76_RS06485 -0.7 -1.6 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS06680 -0.7 -0.8 hypothetical protein compare
BWI76_RS24270 -0.7 -1.6 membrane protein compare
BWI76_RS12585 -0.7 -1.1 transcriptional regulator compare
BWI76_RS00355 -0.7 -1.1 DNA polymerase I compare
BWI76_RS18000 -0.7 -1.3 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS02445 -0.7 -1.9 fumarate reductase subunit C compare
BWI76_RS00280 -0.7 -2.2 ribose ABC transporter permease compare
BWI76_RS05970 -0.7 -0.9 hypothetical protein compare
BWI76_RS02935 -0.7 -4.0 anaerobic ribonucleoside triphosphate reductase compare
BWI76_RS01540 -0.7 -1.6 thiamine biosynthesis protein ThiS compare
BWI76_RS10040 -0.6 -1.3 heat-shock protein HspQ compare
BWI76_RS23915 -0.6 -1.6 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS24920 -0.6 -1.3 YraN family protein compare
BWI76_RS01070 -0.6 -2.5 thiol reductase thioredoxin compare
BWI76_RS02930 -0.6 -2.8 anaerobic ribonucleoside-triphosphate reductase activating protein compare
BWI76_RS19690 -0.6 -1.7 LysR family transcriptional regulator compare
BWI76_RS22840 -0.6 -1.3 transposase compare
BWI76_RS00060 -0.6 -2.2 N-acetylneuraminate lyase compare
BWI76_RS24075 -0.6 -2.3 glutathione synthase compare
BWI76_RS13420 -0.6 -1.3 ABC transporter permease compare
BWI76_RS16870 -0.6 -1.6 LysR family transcriptional regulator compare
BWI76_RS07865 -0.6 -1.1 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS13595 -0.6 -2.9 transcriptional regulator compare
BWI76_RS03025 -0.6 -1.4 N-acetyltransferase compare
BWI76_RS27620 -0.6 -1.8 hypothetical protein compare
BWI76_RS12235 -0.6 -1.3 hypothetical protein compare
BWI76_RS11855 -0.6 -3.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS13805 -0.6 -1.2 inorganic diphosphatase compare
BWI76_RS15840 -0.6 -1.7 prophage protein compare
BWI76_RS26775 -0.6 -2.6 endo-1,4-D-glucanase compare
BWI76_RS07740 -0.6 -0.8 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS25600 -0.6 -0.7 tRNA-Thr compare
BWI76_RS02545 -0.6 -3.5 protease modulator HflK compare
BWI76_RS18675 -0.6 -2.3 fimbrial protein compare
BWI76_RS25910 -0.6 -3.3 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS21810 -0.6 -1.0 universal stress protein compare
BWI76_RS04525 -0.6 -1.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS16965 -0.6 -1.0 murein lipoprotein compare
BWI76_RS24945 -0.6 -0.7 glutamine amidotransferase compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source 0.1mM glass beads in Klebsiella michiganensis M5al

For nitrogen source 0.1mM glass beads across organisms