Experiment set9IT049 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS26015 +2.4 11.1 DUF2559 domain-containing protein compare
BWI76_RS09630 +1.2 1.9 leucyl/phenylalanyl-tRNA--protein transferase compare
BWI76_RS05075 +1.1 1.9 type II secretion system protein GspG compare
BWI76_RS08605 +1.1 2.9 phosphoglyceromutase compare
BWI76_RS06400 +1.0 2.3 oxidative-stress-resistance chaperone compare
BWI76_RS19330 +0.9 1.7 HAD family hydrolase compare
BWI76_RS09560 +0.9 2.5 DoxX family membrane protein compare
BWI76_RS26235 +0.9 2.6 gluconate transporter compare
BWI76_RS16895 +0.9 1.4 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS11675 +0.9 1.8 arginine N-succinyltransferase compare
BWI76_RS08975 +0.9 2.1 amino acid ABC transporter substrate-binding protein compare
BWI76_RS24925 +0.8 2.8 DnaA initiator-associating protein DiaA compare
BWI76_RS23970 +0.8 1.4 mechanosensitive ion channel protein MscS compare
BWI76_RS23895 +0.8 1.4 Xaa-Pro aminopeptidase compare
BWI76_RS05510 +0.8 2.3 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS16755 +0.8 3.8 acetoin reductase compare
BWI76_RS00560 +0.8 1.5 hypothetical protein compare
BWI76_RS05465 +0.8 1.5 amidohydrolase compare
BWI76_RS02725 +0.8 1.2 HxlR family transcriptional regulator compare
BWI76_RS19700 +0.8 2.9 deoxyribonuclease IV compare
BWI76_RS20360 +0.8 1.2 cell division protein DedD compare
BWI76_RS18335 +0.8 5.0 DNA-binding response regulator compare
BWI76_RS11335 +0.8 1.5 tautomerase compare
BWI76_RS20715 +0.8 2.3 RpoE-regulated lipoprotein compare
BWI76_RS16330 +0.7 2.6 oxidoreductase compare
BWI76_RS19240 +0.7 1.7 ABC transporter substrate-binding protein compare
BWI76_RS26440 +0.7 1.5 hypothetical protein compare
BWI76_RS08405 +0.7 2.0 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS01885 +0.7 1.3 CsbD family protein compare
BWI76_RS22815 +0.7 5.6 hybrid sensor histidine kinase/response regulator compare
BWI76_RS03295 +0.7 1.9 transposase compare
BWI76_RS04605 +0.7 1.6 thiamine ABC transporter ATP-binding protein compare
BWI76_RS11810 +0.7 2.3 outer membrane protein OmpW compare
BWI76_RS13730 +0.7 2.8 hypothetical protein compare
BWI76_RS01565 +0.7 1.7 NADH pyrophosphatase compare
BWI76_RS22130 +0.7 3.4 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS08390 +0.7 1.5 hypothetical protein compare
BWI76_RS11125 +0.7 1.6 metal-dependent hydrolase compare
BWI76_RS07780 +0.7 1.4 hypothetical protein compare
BWI76_RS16815 +0.7 1.8 periplasmic binding protein compare
BWI76_RS07955 +0.7 1.4 nucleoside diphosphate kinase regulator compare
BWI76_RS17565 +0.7 0.8 hypothetical protein compare
BWI76_RS16315 +0.7 0.6 SirA-like protein compare
BWI76_RS10060 +0.7 1.5 acylphosphatase compare
BWI76_RS25920 +0.7 1.6 peptidylprolyl isomerase compare
BWI76_RS11820 +0.7 1.3 short-chain dehydrogenase/reductase SDR compare
BWI76_RS11255 +0.6 1.6 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS17945 +0.6 1.7 hypothetical protein compare
BWI76_RS09690 +0.6 1.8 dimethyl sulfoxide reductase compare
BWI76_RS25380 +0.6 2.3 oxaloacetate decarboxylase subunit beta compare
BWI76_RS19755 +0.6 1.7 fructuronate reductase compare
BWI76_RS03020 +0.6 1.6 tRNA hydroxylase compare
BWI76_RS21285 +0.6 1.4 HAD family hydrolase compare
BWI76_RS13030 +0.6 1.4 site-specific recombinase, phage integrase family protein compare
BWI76_RS15345 +0.6 3.5 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS20795 +0.6 1.1 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS10295 +0.6 1.7 short chain dehydrogenase/reductase family oxidoreductase compare
BWI76_RS14800 +0.6 1.4 non-heme chloroperoxidase compare
BWI76_RS19375 +0.6 1.7 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS07730 +0.6 1.1 iron-enterobactin transporter membrane protein compare
BWI76_RS01330 +0.6 2.1 twin-arginine translocase subunit TatC compare
BWI76_RS08615 +0.6 2.2 galactokinase compare
BWI76_RS12895 +0.6 1.6 hypothetical protein compare
BWI76_RS23025 +0.6 1.0 cobalt ABC transporter substrate-binding protein CbiN compare
BWI76_RS06015 +0.6 1.0 hypothetical protein compare
BWI76_RS15940 +0.6 1.7 DMSO reductase maturation protein DsmD compare
BWI76_RS23320 +0.6 1.2 hypothetical protein compare
BWI76_RS14550 +0.6 3.1 2,3-dihydroxybenzoate-AMP ligase compare
BWI76_RS11980 +0.6 1.3 DeoR family transcriptional regulator compare
BWI76_RS20145 +0.6 1.4 NADH-quinone oxidoreductase subunit K compare
BWI76_RS13095 +0.6 1.3 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS23705 +0.6 1.9 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS24275 +0.6 1.7 biopolymer transport protein ExbD compare
BWI76_RS20960 +0.6 1.9 ROK family protein compare
BWI76_RS09045 +0.6 3.5 alpha-glucosidase compare
BWI76_RS13505 +0.6 2.2 putative receptor compare
BWI76_RS03880 +0.6 1.8 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS20675 +0.5 1.1 GMP synthase compare
BWI76_RS15290 +0.5 1.2 transcriptional regulator compare
BWI76_RS15030 +0.5 2.5 ABC transporter compare
BWI76_RS16025 +0.5 1.6 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS09610 +0.5 2.1 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS17180 +0.5 1.6 hypothetical protein compare
BWI76_RS13415 +0.5 1.6 spermidine/putrescine ABC transporter permease compare
BWI76_RS13290 +0.5 2.8 protocatechuate 3,4-dioxygenase subunit beta compare
BWI76_RS16950 +0.5 1.3 TetR family transcriptional regulator compare
BWI76_RS05045 +0.5 1.3 general secretion pathway protein GspM compare
BWI76_RS13160 +0.5 1.6 azoreductase compare
BWI76_RS06540 +0.5 2.1 DNA-binding protein HU-beta compare
BWI76_RS01235 +0.5 1.3 hypothetical protein compare
BWI76_RS05640 +0.5 1.0 GntR family transcriptional regulator compare
BWI76_RS16000 +0.5 1.0 multidrug transporter subunit MdtI compare
BWI76_RS01065 +0.5 1.7 ATP-dependent RNA helicase RhlB compare
BWI76_RS12610 +0.5 1.8 LysR family transcriptional regulator compare
BWI76_RS09615 +0.5 1.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS16090 +0.5 0.7 two-component system response regulator DcuR compare
BWI76_RS07185 +0.5 1.2 hypothetical protein compare
BWI76_RS05665 +0.5 2.7 SAM-dependent methyltransferase compare
BWI76_RS12860 +0.5 1.5 hypothetical protein compare
BWI76_RS19835 +0.5 1.3 nucleoid-associated protein YejK compare
BWI76_RS16990 +0.5 1.2 ABC transporter ATP-binding protein compare
BWI76_RS09180 +0.5 2.3 hypothetical protein compare
BWI76_RS02900 +0.5 2.4 6-phosphogluconolactonase compare
BWI76_RS26520 +0.5 2.3 nickel import ATP-binding protein NikE compare
BWI76_RS02695 +0.5 1.1 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS18355 +0.5 1.9 amino acid ABC transporter permease compare
BWI76_RS17665 +0.5 1.8 proteasome-type protease compare
BWI76_RS09540 +0.5 2.7 hypothetical protein compare
BWI76_RS10260 +0.5 1.4 creatinase compare
BWI76_RS19390 +0.5 2.8 LysR family transcriptional regulator compare
BWI76_RS20930 +0.5 1.4 arsenate reductase (glutaredoxin) compare
BWI76_RS15235 +0.5 1.9 hypothetical protein compare
BWI76_RS12950 +0.5 2.8 acriflavin resistance protein AcrA compare
BWI76_RS15220 +0.5 2.1 L-lactate dehydrogenase compare
BWI76_RS22975 +0.5 0.8 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA compare
BWI76_RS10765 +0.5 2.2 pyrimidine utilization protein D compare
BWI76_RS02955 +0.5 1.6 PTS system, cellobiose-specific IIC component compare
BWI76_RS01205 +0.5 1.4 DUF484 family protein compare
BWI76_RS16300 +0.5 1.7 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS08800 +0.5 2.2 phosphoethanolamine transferase EptA compare
BWI76_RS02820 +0.5 2.3 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
BWI76_RS03605 +0.5 0.8 BMC domain-containing protein compare
BWI76_RS16135 +0.5 2.3 acetyl-CoA acetyltransferase compare
BWI76_RS23505 +0.5 4.0 ferrous iron transporter B compare
BWI76_RS10380 +0.5 2.7 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS12040 +0.5 1.0 hypothetical protein compare
BWI76_RS07590 +0.5 2.2 glutamate ABC transporter ATP-binding protein compare
BWI76_RS18575 +0.5 1.0 transcriptional regulator compare
BWI76_RS10670 +0.5 1.9 PTS fructose transporter subunit IIC compare
BWI76_RS14830 +0.5 1.9 hypothetical protein compare
BWI76_RS16765 +0.5 2.5 spermidine/putrescine ABC transporter permease compare
BWI76_RS26755 +0.5 2.6 peptidase M16 compare
BWI76_RS19480 +0.5 0.9 transcriptional regulator compare
BWI76_RS12170 +0.5 2.1 hypothetical protein compare
BWI76_RS06205 +0.5 1.9 recombination-associated protein RdgC compare
BWI76_RS00725 +0.5 1.5 periplasmic repressor CpxP compare
BWI76_RS23260 +0.5 2.2 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS26115 +0.5 1.5 hypothetical protein compare
BWI76_RS11150 +0.5 1.2 membrane protein compare
BWI76_RS23015 +0.5 1.0 cobalt transporter ATP-binding subunit compare
BWI76_RS19340 +0.5 1.9 xylulokinase compare
BWI76_RS19870 +0.5 1.1 malate:quinone oxidoreductase compare
BWI76_RS19195 +0.5 0.7 nickel ABC transporter permease compare
BWI76_RS20780 +0.5 2.1 alcohol dehydrogenase EutG compare
BWI76_RS20295 +0.4 1.8 dihydroneopterin triphosphate 2'-epimerase compare
BWI76_RS03045 +0.4 0.9 hypothetical protein compare
BWI76_RS00480 +0.4 1.0 hypothetical protein compare
BWI76_RS17655 +0.4 1.9 MFS transporter compare
BWI76_RS21960 +0.4 1.7 fimbrial protein compare
BWI76_RS21675 +0.4 0.5 hypothetical protein compare
BWI76_RS15130 +0.4 2.2 hypothetical protein compare
BWI76_RS17420 +0.4 1.4 hypothetical protein compare
BWI76_RS15785 +0.4 2.4 replication protein compare
BWI76_RS10850 +0.4 2.7 two-component sensor histidine kinase compare
BWI76_RS02630 +0.4 2.1 PTS ascorbate transporter subunit IIA compare
BWI76_RS01190 +0.4 1.4 iron donor protein CyaY compare
BWI76_RS11750 +0.4 1.8 chitooligosaccharide deacetylase compare
BWI76_RS22210 +0.4 2.2 murein transglycosylase B compare
BWI76_RS03415 +0.4 1.2 LacI family transcriptional regulator compare
BWI76_RS15190 +0.4 2.2 GGDEF domain-containing protein compare
BWI76_RS10805 +0.4 1.7 hypothetical protein compare
BWI76_RS05040 +0.4 2.0 type II secretion system protein N compare
BWI76_RS07880 +0.4 1.7 PfkB domain-containing protein compare
BWI76_RS19110 +0.4 2.5 hypothetical protein compare
BWI76_RS08775 +0.4 2.0 dethiobiotin synthase compare
BWI76_RS27830 +0.4 1.8 type I toxin-antitoxin system toxin TisB compare
BWI76_RS20910 +0.4 1.1 glycine cleavage system transcriptional repressor compare
BWI76_RS12115 +0.4 2.6 hypothetical protein compare
BWI76_RS12555 +0.4 2.8 hypothetical protein compare
BWI76_RS14775 +0.4 1.0 creatinine amidohydrolase compare
BWI76_RS19560 +0.4 2.4 beta-1,4-xylanase compare
BWI76_RS24500 +0.4 1.8 urease subunit gamma compare
BWI76_RS11530 +0.4 2.4 chitinase compare
BWI76_RS27835 +0.4 0.9 acyltransferase compare
BWI76_RS12180 +0.4 2.1 membrane protein compare
BWI76_RS18770 +0.4 0.7 DNA gyrase inhibitor compare
BWI76_RS24650 +0.4 1.9 putative transport system permease component compare
BWI76_RS22375 +0.4 1.5 pectin acetylesterase compare
BWI76_RS16810 +0.4 2.2 RpiR family transcriptional regulator compare
BWI76_RS18165 +0.4 0.9 NUDIX pyrophosphatase compare
BWI76_RS16080 +0.4 2.4 LysR family transcriptional regulator compare
BWI76_RS07640 +0.4 0.7 short chain dehydrogenase compare
BWI76_RS15260 +0.4 1.0 hypothetical protein compare
BWI76_RS21915 +0.4 1.2 short-chain dehydrogenase/reductase SDR compare
BWI76_RS04165 +0.4 1.4 DNA repair protein RadA compare
BWI76_RS13965 +0.4 1.2 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS01895 +0.4 2.3 cupin compare
BWI76_RS16685 +0.4 1.9 peptide ABC transporter permease compare
BWI76_RS23560 +0.4 1.2 hypothetical protein compare
BWI76_RS26145 +0.4 2.0 heat-shock protein Hsp15 compare
BWI76_RS13480 +0.4 1.1 XRE family transcriptional regulator compare
BWI76_RS11680 +0.4 1.2 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS24895 +0.4 1.1 galactitol-1-phosphate 5-dehydrogenase compare
BWI76_RS17990 +0.4 2.1 paraquat-inducible membrane protein A compare
BWI76_RS17620 +0.4 1.5 ABC transporter ATP-binding protein compare
BWI76_RS23810 +0.4 1.2 bifunctional protein-disulfide isomerase/oxidoreductase DsbC compare
BWI76_RS23390 +0.4 1.9 oligogalacturonide ABC transporter ATP-binding protein compare
BWI76_RS08970 +0.4 1.2 glutamine ABC transporter permease GlnP compare
BWI76_RS06085 +0.4 2.1 hypothetical protein compare
BWI76_RS00080 +0.4 1.0 N-acetylmannosamine kinase compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source 0.1mM glass beads in Klebsiella michiganensis M5al

For nitrogen source 0.1mM glass beads across organisms