Experiment set9IT048 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoLS4 with L-Tryptophan nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
DVU2206 +3.2 21.7 conserved hypothetical protein (TIGR) compare
DVU2510 +1.5 1.2 penicillin-binding protein (TIGR) compare
DVU1933 +1.3 1.3 peptidase, PfpI family (TIGR) compare
DORF10286 +1.2 5.1 no description compare
DVU2045 +1.2 5.8 hypothetical protein (TIGR) compare
DVU2441 hspC +1.1 2.2 heat shock protein, Hsp20 family (TIGR) compare
DVU0034 +1.1 5.2 DSBA-like thioredoxin domain protein (TIGR) compare
DVU0043 fliQ +1.1 8.8 flagellar biosynthetic protein FliQ (TIGR) compare
DVU1275 +1.1 5.2 hypothetical protein (TIGR) compare
DVU1273 +1.1 8.0 bacterial type II/III secretion system protein (TIGR) compare
DVU0311 +1.1 7.8 flagellar assembly protein FliH, putative (TIGR) compare
DVU1863 +1.0 7.3 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU1267 +1.0 6.0 hypothetical protein (TIGR) compare
DVU1274 +1.0 5.1 hypothetical protein (TIGR) compare
DVU0044 fliP +1.0 5.7 flagellar biosynthetic protein fliP (TIGR) compare
DVU0046 fliN +1.0 5.6 flagellar motor switch protein FliN (TIGR) compare
DVU1266 +1.0 7.3 hypothetical protein (TIGR) compare
DORF10446 +1.0 5.3 SEED: FIG00604570: hypothetical protein compare
DVU1726 +1.0 1.6 hypothetical protein (TIGR) compare
DVU2203 +1.0 2.1 endoribonuclease, L-PSP family (TIGR) compare
DVU2894 flrA +0.9 5.5 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU1436 +0.9 0.9 hypothetical protein (TIGR) compare
DVU1265 +0.9 6.7 hypothetical protein (TIGR) compare
DVU0310 fliI +0.9 6.6 flagellum-specific ATP synthase FliI (TIGR) compare
DVU1174 +0.9 1.6 hypothetical protein (TIGR) compare
DVU0522 yviF +0.9 4.3 conserved hypothetical protein (TIGR) compare
DVU0910 fliM +0.9 4.7 flagellar motor switch protein FliM (TIGR) compare
DVU3234 +0.9 4.7 flagellar biosynthetic protein FliR (TIGR) compare
DVU3232 flhA +0.9 7.2 flagellar biosynthetic protein FlhA (TIGR) compare
DVU1264 +0.9 4.3 transglycosylase SLT domain protein (TIGR) compare
DVU0515 flgH +0.9 5.6 flagellar L-ring protein FlgH (TIGR) compare
DVU0514 +0.9 6.2 FlgA family protein (TIGR) compare
DVU3233 flhB +0.9 6.4 flagellar biosynthetic protein FlhB (TIGR) compare
DVU0315 flgC +0.9 5.6 flagellar basal-body rod protein FlgC (TIGR) compare
DVU1271 +0.8 5.1 general secretion pathway protein F, putative (TIGR) compare
DVU0512 flgF +0.8 6.3 flagellar basal-body rod protein, putative (TIGR) compare
DVU1272 gspE +0.8 5.9 general secretion pathway protein E, putative (TIGR) compare
DVU1276 +0.8 6.1 hypothetical protein (TIGR) compare
DVU1251 +0.8 1.9 hypothetical protein (TIGR) compare
DVU1263 pppA +0.8 4.4 type IV prepilin-like proteins leader peptidase (TIGR) compare
DVU0793 +0.8 2.1 hypothetical protein (TIGR) compare
DVU0045 +0.8 3.5 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU3227 +0.8 4.0 flagellar basal body-associated protein, putative (TIGR) compare
DVU0314 fliE +0.8 3.1 flagellar basal body component FliE (TIGR) compare
DVU0913 +0.8 4.5 conserved hypothetical protein (TIGR) compare
DVU0313 fliF +0.8 5.8 flagellar M-ring protein FliF (TIGR) compare
DVU_tRNA-Ala-5 tRNA-Ala +0.8 0.6 tRNA with anticodon CGC for Ala (VIMSS-AUTO) compare
DVU0975 +0.8 2.2 conserved hypothetical protein (TIGR) compare
DVU0516 flgI +0.7 4.5 flagellar P-ring protein FlgI (TIGR) compare
DVU2915 +0.7 1.1 hypothetical protein (TIGR) compare
DVU0859 +0.7 4.0 hypothetical protein (TIGR) compare
DVU2896 +0.7 5.8 TPR domain protein (TIGR) compare
DVU0519 +0.7 6.1 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU1862 +0.7 2.9 GGDEF domain protein (TIGR) compare
DVU0513 flgG +0.7 5.3 flagellar basal-body rod protein FlgG (TIGR) compare
DVU1464 +0.7 5.6 heptosyltransferase family protein (TIGR) compare
DVU1446 +0.7 4.8 heptosyltransferase family protein (TIGR) compare
DORF9585 +0.7 1.0 no description compare
DVU0316 flgB +0.7 1.8 flagellar basal-body rod protein FlgB (TIGR) compare
DVU2846 +0.7 1.8 hypothetical protein (TIGR) compare
DVU1728 +0.6 0.5 conserved hypothetical protein (TIGR) compare
DVU0047 +0.6 2.4 flagellar protein FliL (TIGR) compare
DVU1796 +0.6 1.0 hypothetical protein (TIGR) compare
DVU1268 +0.6 2.1 hypothetical protein (TIGR) compare
DVU0312 fliG +0.6 3.4 flagellar motor switch protein FliG (TIGR) compare
DVU1873 ppiB-2 +0.6 2.6 peptidyl-prolyl cis-trans isomerase B (TIGR) compare
DVU0410 +0.6 3.8 hypothetical protein (TIGR) compare
DVU2577 +0.6 2.8 DNA-binding response regulator, LuxR family (TIGR) compare
DVU0250 +0.6 2.2 hypothetical protein (TIGR) compare
DVU0518 +0.6 4.0 hypothetical protein (TIGR) compare
DVU2198 +0.6 0.5 hypothetical protein (TIGR) compare
DVU3309 +0.6 2.2 endo/excinuclease amino terminal domain protein (TIGR) compare
DVU2184 +0.6 2.9 DNA-binding domain, excisionase family (TIGR) compare
DVU0876 +0.6 3.8 metallo-beta-lactamase family protein (TIGR) compare
DVU3387 +0.6 4.2 hypothetical protein (TIGR) compare
DVU0764 hup-2 +0.6 2.3 DNA-binding protein HU (TIGR) compare
DVU1175 +0.6 1.1 hypothetical protein (TIGR) compare
DVU2566 lysA-2 +0.6 1.3 diaminopimelate decarboxylase (TIGR) compare
DVU1630 ptsN +0.6 0.8 PTS system, IIA component (TIGR) compare
DVU1669 rluB +0.6 2.2 ribosomal large subunit pseudouridine synthase B (TIGR) compare
DVU3223 aspB +0.6 4.8 aspartate aminotransferase (TIGR) compare
DVU2391 +0.6 0.5 hypothetical protein (TIGR) compare
DVU0580 moaA +0.6 2.5 molybdenum cofactor biosynthesis protein A (TIGR) compare
DVU3229 fliA +0.6 3.0 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU0074 +0.5 1.5 polysaccharide biosynthesis domain protein (TIGR) compare
DVU2323 +0.5 1.3 hypothetical protein (TIGR) compare
DVU3273 +0.5 1.0 conserved hypothetical protein (TIGR) compare
DVU2040 +0.5 1.9 hypothetical protein (TIGR) compare
DVU2669 +0.5 1.4 conserved domain protein (TIGR) compare
DVU0858 +0.5 3.2 lipoprotein, putative (TIGR) compare
DVU3392 glnA +0.5 3.4 glutamine synthetase, type I (TIGR) compare
DVU0951 moeA-2 +0.5 1.9 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU0642 +0.5 2.3 hydrolase, alpha/beta fold family (TIGR) compare
DVU0698 rfbC +0.5 2.8 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU2021 +0.5 1.6 hypothetical protein (TIGR) compare
DVU0971 +0.5 2.5 molybdenum cofactor biosynthesis protein (TIGR) compare
DVU0295 +0.5 4.2 amine oxidase, flavin-containing (TIGR) compare
DORF7824 +0.5 3.1 SEED: FIG00603141: hypothetical protein compare
DORF14650 +0.5 2.0 no description compare
DVU2461 appB +0.5 3.1 oligopeptide ABC transporter, permease protein (TIGR) compare
DORF12455 +0.5 1.5 SEED: helix-turn-helix protein, CopG family compare
DVU1135 +0.5 1.4 conserved domain protein (TIGR) compare
DVU1363 rfbD +0.5 2.4 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU0411 +0.5 3.2 heptosyltransferase family protein (TIGR) compare
DVU0280 wbaZ-2 +0.5 1.4 glycosyl transferase, group 1 family protein (TIGR) compare
DVU0307 +0.5 3.0 flagella basal body rod domain protein (TIGR) compare
DVU2890 +0.5 2.2 conserved domain protein (TIGR) compare
DVU0318 +0.5 1.1 TPR domain protein (TIGR) compare
DVU0145 +0.5 1.6 response regulator (TIGR) compare
DVU1179 aor +0.5 3.4 aldehyde:ferredoxin oxidoreductase, tungsten-containing (TIGR) compare
DVU1154 +0.5 0.5 hypothetical protein (TIGR) compare
DVU2290 +0.5 0.4 hydrogenase, CooU subunit, putative (TIGR) compare
DVU0238 +0.5 1.3 hypothetical protein (TIGR) compare
DVU1373 divIVA +0.5 0.6 cell-division initiation protein DivIVA (TIGR) compare
DVU2115 +0.5 0.8 hypothetical protein (TIGR) compare
DVU3287 +0.5 3.5 glycosyl transferase, group 2 family protein (TIGR) compare
DVU2659 +0.5 1.1 exsB protein (TIGR) compare
DVU0384 flr +0.5 1.8 flavoredoxin (TIGR) compare
DVU3022 +0.5 0.3 sensory box histidine kinase/response regulator (TIGR) compare
DVU1183 +0.5 3.2 HD domain protein (TIGR) compare
DVU0842 +0.5 0.7 hypothetical protein (TIGR) compare
DVU1076 +0.5 1.1 conserved hypothetical protein TIGR00278 (TIGR) compare
DVU3280 +0.4 3.5 peptide ABC transporter, ATP-binding protein, authentic frameshift (TIGR) compare
DVU0451 +0.4 3.7 chloride channel family protein (TIGR) compare
DVU1531 +0.4 1.5 methyltransferase, putative (TIGR) compare
DVU0640 pomA +0.4 2.3 chemotaxis protein PomA (TIGR) compare
DVU2692 +0.4 0.2 conserved domain protein (TIGR) compare
DVU0298 +0.4 1.7 hypothetical protein (TIGR) compare
DVU0251 +0.4 3.0 membrane protein, putative (TIGR) compare
DVU0747 cysA +0.4 1.7 ABC transporter, ATP-binding protein (TIGR) compare
DVU1445 +0.4 2.7 flagellar hook-length control domain protein (TIGR) compare
DVU2990 moeA +0.4 3.4 molybdopterin biosynthesis MoeA protein (TIGR) compare
DVU2462 +0.4 3.0 oligopeptide ABC transporter, permease protein (TIGR) compare
DVU0409 +0.4 0.8 hypothetical protein (TIGR) compare
DVU1093 +0.4 1.0 HAD-superfamily hydrolase, subfamily IA, variant 3 (TIGR) compare
DVU0470 trpB-2 +0.4 1.3 tryptophan synthase, beta subunit (TIGR) compare
DVU1682 +0.4 1.3 GAF domain protein (TIGR) compare
DVU1447 +0.4 2.8 CgeB family protein (TIGR) compare
DVU0339 serA +0.4 2.4 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU1589 +0.4 2.0 hypothetical protein (TIGR) compare
DVU0077 +0.4 2.9 conserved hypothetical protein (TIGR) compare
DVU1577 hslV +0.4 0.9 ATP-dependent protease hslV (TIGR) compare
DORF12467 +0.4 0.8 SEED: protein of unknown function DUF497 compare
DORF32061 +0.4 1.3 SEED: FIG00604583: hypothetical protein compare
DVU1806 mgtE +0.4 2.3 magnesium transporter (TIGR) compare
DVU1082 +0.4 2.1 3- 5 exonuclease domain protein (TIGR) compare
DVU1853 +0.4 0.6 hypothetical protein (TIGR) compare
DVU2165 +0.4 2.0 lysozyme, putative (TIGR) compare
DVU2881 +0.4 1.0 phage/plasmid primase, P4 family (TIGR) compare
DVU0561 +0.4 1.2 glycosyl transferase, group 1 family protein (TIGR) compare
DVU1145 +0.4 0.7 hypothetical protein (TIGR) compare
DVU2212 +0.4 2.2 conserved hypothetical protein (TIGR) compare
DVU1813 +0.4 1.7 hypothetical protein (TIGR) compare
DVU3118 +0.4 1.2 conserved hypothetical protein (TIGR) compare
DVU1444 flgD +0.4 2.5 basal-body rod modification protein FlgD (TIGR) compare
DVU1393 +0.4 1.0 hypothetical protein (TIGR) compare
DVU0521 csrA +0.4 1.1 carbon storage regulator (TIGR) compare
DVU1351 +0.4 0.9 membrane protein, MarC family (TIGR) compare
DVU1430 +0.4 3.4 peptidase, M16 family (TIGR) compare
DVU1536 mltC +0.4 1.2 transglycosylase, SLT family (TIGR) compare
DVU0274 +0.4 1.1 hypothetical protein (TIGR) compare
DVU0247 ntrX +0.4 2.3 response regulator (TIGR) compare
DVU0048 +0.4 2.6 chemotaxis protein MotB (TIGR) compare
DVU1441 flaB1 +0.4 2.0 flagellin (TIGR) compare
DVU0486 +0.4 1.8 hypothetical protein (TIGR) compare
DVU2961 +0.4 1.8 hypothetical protein (TIGR) compare
DVU0941 pep* +0.4 2.4 metalloprotease, iron-related (Dmitry Rodionov) compare
DVU2210 +0.4 2.5 TPR domain protein (TIGR) compare
DVU1643 +0.4 1.2 conserved hypothetical protein, degenerate (TIGR) compare
DVU2152 +0.4 2.2 hypothetical protein (TIGR) compare
DVU2591 +0.4 1.8 tail fiber assembly protein, putative (TIGR) compare
DVU2411 +0.4 2.2 EF hand domain protein (TIGR) compare
DVU0499 +0.4 1.2 conserved hypothetical protein TIGR00149 (TIGR) compare
DVU1943 +0.4 1.0 hypothetical protein (TIGR) compare
DVU1940 glpA +0.4 2.0 anaerobic glycerol-3-phosphate dehydrogenase, A subunit, putative (TIGR) compare
DVU2267 +0.4 1.4 hypothetical protein (TIGR) compare
DVU1465 +0.4 2.4 CgeB family protein (TIGR) compare
DVU2684 +0.4 0.9 hypothetical protein (TIGR) compare
DORF8192 +0.4 0.4 SEED: FIG00606834: hypothetical protein compare
DVU3360 parB +0.4 2.0 ParB family protein (TIGR) compare
DVU2247 ahpC +0.4 1.5 alkyl hydroperoxide reductase C (Dmitry Rodionov) compare
DVU2910 +0.4 1.5 membrane protein, putative (TIGR) compare
DVU1729 +0.4 1.4 killer protein, putative (TIGR) compare
DVU2444 flaB3 +0.4 1.4 flagellin (TIGR) compare
DVU1676 secG +0.4 1.2 preprotein translocase, SecG subunit (TIGR) compare
DVU2627 +0.4 1.2 conserved domain protein (TIGR) compare
DVU2609 +0.3 1.4 chemotaxis MotB protein, putative (TIGR) compare
DVU0946 +0.3 1.1 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU2138 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU0938 +0.3 2.1 isoamylase N-terminal domain protein (TIGR) compare
DVU2117 +0.3 1.6 membrane protein, putative (TIGR) compare
DVU1850 +0.3 0.7 CBS domain protein (TIGR) compare
DVU1070 rbsA +0.3 1.4 branched chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU0351 +0.3 2.4 cytidine 5monophosphate N-acetylneuraminic acid synthetase, putative/polysaccharide biosynthesis protein (TIGR) compare
DVU2658 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU1794 +0.3 1.4 hypothetical protein (TIGR) compare
DVU1242 vacJhomolog +0.3 0.4 vacJ lipoprotein, putative (TIGR) compare
DVU0289 moaC +0.3 1.6 molybdenum cofactor biosynthesis protein C (TIGR) compare
DVU1261 +0.3 2.6 conserved domain protein (TIGR) compare
DVU0980 b1199 +0.3 1.7 DAK2 domain protein (TIGR) compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Tryptophan in Desulfovibrio vulgaris Hildenborough JW710

For nitrogen source L-Tryptophan across organisms